Protein–RNA interactions for Protein: P02469

Lamb1, Laminin subunit beta-1, mousemouse

Predictions only

Length 1,786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lamb1P02469 Gm25239-201ENSMUST00000174915 86 ntBASIC45,1■■■■■ 4,81
Lamb1P02469 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41,8■■■■■ 4,28
Lamb1P02469 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40,84■■■■■ 4,13
Lamb1P02469 Gm15042-201ENSMUST00000120212 883 ntBASIC39,65■■■■□ 3,94
Lamb1P02469 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39,46■■■■□ 3,91
Lamb1P02469 Gm24109-201ENSMUST00000175489 103 ntBASIC39,21■■■■□ 3,87
Lamb1P02469 Gm15045-201ENSMUST00000117359 883 ntBASIC39,04■■■■□ 3,84
Lamb1P02469 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38,52■■■■□ 3,76
Lamb1P02469 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38,3■■■■□ 3,72
Lamb1P02469 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38,12■■■■□ 3,69
Lamb1P02469 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38,06■■■■□ 3,68
Lamb1P02469 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37,64■■■■□ 3,62
Lamb1P02469 Gm23366-201ENSMUST00000175022 89 ntBASIC37,63■■■■□ 3,61
Lamb1P02469 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37,45■■■■□ 3,58
Lamb1P02469 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37,23■■■■□ 3,55
Lamb1P02469 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36,94■■■■□ 3,5
Lamb1P02469 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36,72■■■■□ 3,47
Lamb1P02469 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36,65■■■■□ 3,46
Lamb1P02469 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36,48■■■■□ 3,43
Lamb1P02469 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36,4■■■■□ 3,42
Lamb1P02469 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36,37■■■■□ 3,41
Lamb1P02469 Psd-208ENSMUST00000224556 2034 ntBASIC36,33■■■■□ 3,41
Lamb1P02469 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36,32■■■■□ 3,41
Lamb1P02469 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36,3■■■■□ 3,4
Lamb1P02469 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36,24■■■■□ 3,39
Lamb1P02469 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36,24■■■■□ 3,39
Lamb1P02469 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36,21■■■■□ 3,39
Lamb1P02469 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36,13■■■■□ 3,37
Lamb1P02469 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36,11■■■■□ 3,37
Lamb1P02469 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36,01■■■■□ 3,36
Lamb1P02469 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35,81■■■■□ 3,32
Lamb1P02469 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35,73■■■■□ 3,31
Lamb1P02469 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35,71■■■■□ 3,31
Lamb1P02469 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35,66■■■■□ 3,3
Lamb1P02469 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35,54■■■■□ 3,28
Lamb1P02469 Gm25238-201ENSMUST00000174914 89 ntBASIC35,51■■■■□ 3,27
Lamb1P02469 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35,46■■■■□ 3,27
Lamb1P02469 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35,23■■■■□ 3,23
Lamb1P02469 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35,15■■■■□ 3,22
Lamb1P02469 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35,08■■■■□ 3,21
Lamb1P02469 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35,08■■■■□ 3,21
Lamb1P02469 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Lamb1P02469 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34,95■■■■□ 3,19
Lamb1P02469 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34,94■■■■□ 3,18
Lamb1P02469 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34,86■■■■□ 3,17
Lamb1P02469 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34,81■■■■□ 3,16
Lamb1P02469 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34,79■■■■□ 3,16
Lamb1P02469 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34,73■■■■□ 3,15
Lamb1P02469 Gm27325-201ENSMUST00000175467 74 ntBASIC34,72■■■■□ 3,15
Lamb1P02469 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34,68■■■■□ 3,14
Lamb1P02469 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34,61■■■■□ 3,13
Lamb1P02469 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34,52■■■■□ 3,12
Lamb1P02469 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34,48■■■■□ 3,11
Lamb1P02469 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34,47■■■■□ 3,11
Lamb1P02469 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34,44■■■■□ 3,1
Lamb1P02469 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34,32■■■■□ 3,08
Lamb1P02469 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34,29■■■■□ 3,08
Lamb1P02469 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34,24■■■■□ 3,07
Lamb1P02469 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34,14■■■■□ 3,06
Lamb1P02469 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
Lamb1P02469 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34,05■■■■□ 3,04
Lamb1P02469 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34,05■■■■□ 3,04
Lamb1P02469 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34,01■■■■□ 3,04
Lamb1P02469 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34,01■■■■□ 3,03
Lamb1P02469 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3,03
Lamb1P02469 Rab21-202ENSMUST00000218831 843 ntBASIC33,95■■■■□ 3,02
Lamb1P02469 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33,91■■■■□ 3,02
Lamb1P02469 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33,84■■■■□ 3,01
Lamb1P02469 Gm10524-201ENSMUST00000181931 1893 ntBASIC33,82■■■■□ 3
Lamb1P02469 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33,81■■■■□ 3
Lamb1P02469 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33,8■■■■□ 3
Lamb1P02469 Gm25262-201ENSMUST00000174934 133 ntBASIC33,75■■■□□ 2,99
Lamb1P02469 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33,75■■■□□ 2,99
Lamb1P02469 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33,75■■■□□ 2,99
Lamb1P02469 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33,75■■■□□ 2,99
Lamb1P02469 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33,7■■■□□ 2,99
Lamb1P02469 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33,7■■■□□ 2,98
Lamb1P02469 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33,69■■■□□ 2,98
Lamb1P02469 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33,65■■■□□ 2,98
Lamb1P02469 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33,65■■■□□ 2,98
Lamb1P02469 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33,64■■■□□ 2,98
Lamb1P02469 Gm42596-201ENSMUST00000196305 1958 ntBASIC33,59■■■□□ 2,97
Lamb1P02469 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33,57■■■□□ 2,97
Lamb1P02469 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33,46■■■□□ 2,95
Lamb1P02469 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33,42■■■□□ 2,94
Lamb1P02469 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33,4■■■□□ 2,94
Lamb1P02469 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33,39■■■□□ 2,94
Lamb1P02469 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33,38■■■□□ 2,93
Lamb1P02469 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33,37■■■□□ 2,93
Lamb1P02469 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33,35■■■□□ 2,93
Lamb1P02469 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33,34■■■□□ 2,93
Lamb1P02469 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33,31■■■□□ 2,92
Lamb1P02469 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33,27■■■□□ 2,92
Lamb1P02469 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33,26■■■□□ 2,92
Lamb1P02469 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33,24■■■□□ 2,91
Lamb1P02469 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33,18■■■□□ 2,9
Lamb1P02469 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33,09■■■□□ 2,89
Lamb1P02469 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33,07■■■□□ 2,88
Lamb1P02469 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Lamb1P02469 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33,05■■■□□ 2,88
Retrieved 100 of 76,532 protein–RNA pairs in 13,2 ms