Protein–RNA interactions for Protein: P02469

Lamb1, Laminin subunit beta-1, mousemouse

Predictions only

Length 1,786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lamb1P02469 Gm25239-201ENSMUST00000174915 86 ntBASIC45.1■■■■■ 4.81
Lamb1P02469 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.8■■■■■ 4.28
Lamb1P02469 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
Lamb1P02469 Gm15042-201ENSMUST00000120212 883 ntBASIC39.65■■■■□ 3.94
Lamb1P02469 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
Lamb1P02469 Gm24109-201ENSMUST00000175489 103 ntBASIC39.21■■■■□ 3.87
Lamb1P02469 Gm15045-201ENSMUST00000117359 883 ntBASIC39.04■■■■□ 3.84
Lamb1P02469 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Lamb1P02469 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
Lamb1P02469 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.12■■■■□ 3.69
Lamb1P02469 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.06■■■■□ 3.68
Lamb1P02469 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Lamb1P02469 Gm23366-201ENSMUST00000175022 89 ntBASIC37.63■■■■□ 3.61
Lamb1P02469 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.58
Lamb1P02469 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Lamb1P02469 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.94■■■■□ 3.5
Lamb1P02469 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Lamb1P02469 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.65■■■■□ 3.46
Lamb1P02469 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Lamb1P02469 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Lamb1P02469 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.37■■■■□ 3.41
Lamb1P02469 Psd-208ENSMUST00000224556 2034 ntBASIC36.33■■■■□ 3.41
Lamb1P02469 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.32■■■■□ 3.41
Lamb1P02469 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.3■■■■□ 3.4
Lamb1P02469 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.24■■■■□ 3.39
Lamb1P02469 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.24■■■■□ 3.39
Lamb1P02469 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Lamb1P02469 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Lamb1P02469 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.11■■■■□ 3.37
Lamb1P02469 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.01■■■■□ 3.36
Lamb1P02469 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.81■■■■□ 3.32
Lamb1P02469 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Lamb1P02469 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Lamb1P02469 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Lamb1P02469 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.54■■■■□ 3.28
Lamb1P02469 Gm25238-201ENSMUST00000174914 89 ntBASIC35.51■■■■□ 3.27
Lamb1P02469 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.46■■■■□ 3.27
Lamb1P02469 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Lamb1P02469 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Lamb1P02469 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Lamb1P02469 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
Lamb1P02469 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Lamb1P02469 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.95■■■■□ 3.19
Lamb1P02469 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.94■■■■□ 3.18
Lamb1P02469 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Lamb1P02469 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Lamb1P02469 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.79■■■■□ 3.16
Lamb1P02469 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Lamb1P02469 Gm27325-201ENSMUST00000175467 74 ntBASIC34.72■■■■□ 3.15
Lamb1P02469 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Lamb1P02469 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Lamb1P02469 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.52■■■■□ 3.12
Lamb1P02469 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Lamb1P02469 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Lamb1P02469 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.44■■■■□ 3.1
Lamb1P02469 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.32■■■■□ 3.08
Lamb1P02469 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.29■■■■□ 3.08
Lamb1P02469 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.24■■■■□ 3.07
Lamb1P02469 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Lamb1P02469 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Lamb1P02469 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.05■■■■□ 3.04
Lamb1P02469 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.04
Lamb1P02469 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Lamb1P02469 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Lamb1P02469 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Lamb1P02469 Rab21-202ENSMUST00000218831 843 ntBASIC33.95■■■■□ 3.02
Lamb1P02469 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.91■■■■□ 3.02
Lamb1P02469 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
Lamb1P02469 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.82■■■■□ 3
Lamb1P02469 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Lamb1P02469 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Lamb1P02469 Gm25262-201ENSMUST00000174934 133 ntBASIC33.75■■■□□ 2.99
Lamb1P02469 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Lamb1P02469 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.75■■■□□ 2.99
Lamb1P02469 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.75■■■□□ 2.99
Lamb1P02469 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Lamb1P02469 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.7■■■□□ 2.98
Lamb1P02469 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Lamb1P02469 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
Lamb1P02469 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Lamb1P02469 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.64■■■□□ 2.98
Lamb1P02469 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.59■■■□□ 2.97
Lamb1P02469 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
Lamb1P02469 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Lamb1P02469 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.42■■■□□ 2.94
Lamb1P02469 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.4■■■□□ 2.94
Lamb1P02469 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Lamb1P02469 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Lamb1P02469 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.37■■■□□ 2.93
Lamb1P02469 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.35■■■□□ 2.93
Lamb1P02469 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
Lamb1P02469 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.31■■■□□ 2.92
Lamb1P02469 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.27■■■□□ 2.92
Lamb1P02469 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.92
Lamb1P02469 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.24■■■□□ 2.91
Lamb1P02469 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Lamb1P02469 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Lamb1P02469 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.07■■■□□ 2.88
Lamb1P02469 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Lamb1P02469 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.05■■■□□ 2.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms