RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 PHO89P38361 574 aa-0.49□□□□□ -2.49
snR48snR48 RPL13BP40212 199 aaKnown RBP-0.49□□□□□ -2.49
snR48snR48 TAD2P47058 250 aa-0.49□□□□□ -2.49
snR48snR48 CYT2Q00873 224 aa-0.49□□□□□ -2.49
snR48snR48 YPL039WQ03080 316 aa-0.49□□□□□ -2.49
snR48snR48 PEX12Q04370 399 aa-0.49□□□□□ -2.49
snR48snR48 RPL13AQ12690 199 aaPredicted RBP-0.49□□□□□ -2.49
snR48snR48 INH1P01097 85 aa-0.5□□□□□ -2.49
snR48snR48 RPL1AP0CX43 217 aaKnown RBP-0.5□□□□□ -2.49
snR48snR48 RPL1BP0CX44 217 aaKnown RBP-0.5□□□□□ -2.49
snR48snR48 MAS1P10507 462 aa-0.5□□□□□ -2.49
snR48snR48 VMA2P16140 517 aaKnown RBP-0.5□□□□□ -2.49
snR48snR48 RBK1P25332 333 aa-0.5□□□□□ -2.49
snR48snR48 PEX4P29340 183 aa-0.5□□□□□ -2.49
snR48snR48 PUP2P32379 260 aa-0.5□□□□□ -2.49
snR48snR48 SOP4P39543 234 aaPredicted RBP-0.5□□□□□ -2.49
snR48snR48 ERV29P53337 310 aa-0.5□□□□□ -2.49
snR48snR48 YLR162WQ06235 118 aa-0.5□□□□□ -2.49
snR48snR48 YLR012CQ07927 99 aa-0.5□□□□□ -2.49
snR48snR48 NOT5Q12514 560 aaPredicted RBP-0.5□□□□□ -2.49
snR48snR48 YBL112CQ3E7Y4 105 aa-0.5□□□□□ -2.49
snR48snR48 RPC53P25441 422 aa-0.51□□□□□ -2.49
snR48snR48 BMH1P29311 267 aaKnown RBP-0.51□□□□□ -2.49
snR48snR48 FLO9P39712 1322 aa-0.51□□□□□ -2.49
snR48snR48 AVT7P40501 490 aa-0.51□□□□□ -2.49
snR48snR48 ERG25P53045 309 aa-0.51□□□□□ -2.49
snR48snR48 PXR1P53335 271 aaPredicted RBP-0.51□□□□□ -2.49
snR48snR48 YMR007WQ03675 126 aa-0.51□□□□□ -2.49
snR48snR48 YMR310CQ04867 317 aaPredicted RBP-0.51□□□□□ -2.49
snR48snR48 SPE3Q12074 293 aaKnown RBP-0.51□□□□□ -2.49
snR48snR48 SAS5Q99314 248 aa-0.51□□□□□ -2.49
snR48snR48 HSP82P02829 709 aaKnown RBP-0.52□□□□□ -2.49
snR48snR48 YLL053CP0CD98 152 aa-0.52□□□□□ -2.49
snR48snR48 DPB2P24482 689 aaPredicted RBP-0.52□□□□□ -2.49
snR48snR48 HMX1P32339 317 aa-0.52□□□□□ -2.49
snR48snR48 COT1P32798 439 aa-0.52□□□□□ -2.49
snR48snR48 UPS2P35200 230 aa-0.52□□□□□ -2.49
snR48snR48 PEX32P38292 413 aa-0.52□□□□□ -2.49
snR48snR48 YHR022CP38763 256 aa-0.52□□□□□ -2.49
snR48snR48 CDC31P06704 161 aaKnown RBP-0.53□□□□□ -2.49
snR48snR48 QCR8P08525 94 aa-0.53□□□□□ -2.49
snR48snR48 GPA2P10823 449 aa-0.53□□□□□ -2.49
snR48snR48 IFM1P25038 676 aa-0.53□□□□□ -2.49
snR48snR48 ERG2P32352 222 aa-0.53□□□□□ -2.49
snR48snR48 AVT2P39981 480 aa-0.53□□□□□ -2.49
snR48snR48 EFM4P40516 257 aa-0.53□□□□□ -2.49
snR48snR48 BUD27P43573 796 aaKnown RBP RIP-Chip data-0.53□□□□□ -2.49not detected
snR48snR48 BUD25P85052 153 aa-0.53□□□□□ -2.49
snR48snR48 MRPS8Q03799 155 aa-0.53□□□□□ -2.49
snR48snR48 UTP23Q12339 254 aaKnown RBP-0.53□□□□□ -2.49
snR48snR48 ATO3Q12359 275 aa-0.53□□□□□ -2.49
snR48snR48 RGS2Q99188 309 aa-0.53□□□□□ -2.49
snR48snR48 THR4P16120 514 aaKnown RBP-0.54□□□□□ -2.5
snR48snR48 POP8P38208 133 aa-0.54□□□□□ -2.5
snR48snR48 SIF2P38262 535 aa-0.54□□□□□ -2.5
snR48snR48 SEN34P39707 275 aa-0.54□□□□□ -2.5
snR48snR48 YGR016WP53209 190 aa-0.54□□□□□ -2.5
snR48snR48 SNX41Q04053 625 aa-0.54□□□□□ -2.5
snR48snR48 YLR446WQ06204 433 aa-0.54□□□□□ -2.5
snR48snR48 CTR3Q06686 241 aa-0.54□□□□□ -2.5
snR48snR48 GEP5Q12393 293 aa-0.54□□□□□ -2.5
snR48snR48 PHO88P38264 188 aaPredicted RBP-0.55□□□□□ -2.5
snR48snR48 VAB2P40003 282 aa-0.55□□□□□ -2.5
snR48snR48 ICE2P40499 491 aa-0.55□□□□□ -2.5
snR48snR48 TAF6P53040 516 aa-0.55□□□□□ -2.5
snR48snR48 IRC4Q03036 179 aa-0.55□□□□□ -2.5
snR48snR48 YFH1Q07540 174 aa-0.55□□□□□ -2.5
snR48snR48 CYR1P08678 2026 aaKnown RBP-0.55□□□□□ -2.5
snR48snR48 POX1P13711 748 aa-0.56□□□□□ -2.5
snR48snR48 RNP1P32385 249 aa-0.56□□□□□ -2.5
snR48snR48 SWI3P32591 825 aa-0.56□□□□□ -2.5
snR48snR48 GDH2P33327 1092 aaKnown RBP-0.56□□□□□ -2.5
snR48snR48 ARN2P38724 620 aa-0.56□□□□□ -2.5
snR48snR48 YMR134WP40207 237 aa-0.56□□□□□ -2.5
snR48snR48 BTT1P40314 149 aaPredicted RBP-0.56□□□□□ -2.5
snR48snR48 KEL2P50090 882 aa-0.56□□□□□ -2.5
snR48snR48 NIF3P53081 288 aa-0.56□□□□□ -2.5
snR48snR48 MAL13P53338 473 aa-0.56□□□□□ -2.5
snR48snR48 MPA43P53583 542 aaPredicted RBP-0.56□□□□□ -2.5
snR48snR48 YDL121CQ07541 149 aa-0.56□□□□□ -2.5
snR48snR48 MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.56□□□□□ -2.5not detected
snR48snR48 RPS3P05750 240 aaKnown RBP-0.57□□□□□ -2.5
snR48snR48 RAD3P06839 778 aa-0.57□□□□□ -2.5
snR48snR48 DDI2P0CH63 225 aa-0.57□□□□□ -2.5
snR48snR48 DDI3P0CH64 225 aa-0.57□□□□□ -2.5
snR48snR48 CCA1P21269 546 aa-0.57□□□□□ -2.5
snR48snR48 VMA5P31412 392 aaKnown RBP-0.57□□□□□ -2.5
snR48snR48 ACB1P31787 87 aa-0.57□□□□□ -2.5
snR48snR48 MDL1P33310 695 aa-0.57□□□□□ -2.5
snR48snR48 CSG2P35206 410 aa-0.57□□□□□ -2.5
snR48snR48 YEL067CP39978 195 aa-0.57□□□□□ -2.5
snR48snR48 YIL089WP40500 205 aa-0.57□□□□□ -2.5
snR48snR48 YFL040WP43562 540 aa-0.57□□□□□ -2.5
snR48snR48 MDM34P53083 459 aa-0.57□□□□□ -2.5
snR48snR48 YNR068CP53754 272 aa-0.57□□□□□ -2.5
snR48snR48 SUB1P54000 292 aaKnown RBP-0.57□□□□□ -2.5
snR48snR48 PPH21P23594 369 aa-0.58□□□□□ -2.5
snR48snR48 VPH1P32563 840 aaKnown RBP-0.58□□□□□ -2.5
snR48snR48 ZRT1P32804 376 aa-0.58□□□□□ -2.5
snR48snR48 IMP3P32899 183 aaPredicted RBP-0.58□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 122.5 ms