RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C NDL1Q06568 189 aa6.26□□□□□ -1.41
UME1YPL139C GAT3Q07928 141 aa6.26□□□□□ -1.41
UME1YPL139C TPK3P05986 398 aa6.25□□□□□ -1.41
UME1YPL139C FBA1P14540 359 aaKnown RBP6.25□□□□□ -1.41
UME1YPL139C MAL32P38158 584 aa6.25□□□□□ -1.41
UME1YPL139C AMN1P38285 549 aaPredicted RBP6.25□□□□□ -1.41
UME1YPL139C CHL4P38907 458 aa6.25□□□□□ -1.41
UME1YPL139C YIL012WP40551 113 aa6.25□□□□□ -1.41
UME1YPL139C YGL101WP53144 215 aa6.25□□□□□ -1.41
UME1YPL139C TNA1P53322 534 aa6.25□□□□□ -1.41
UME1YPL139C MAL12P53341 584 aa6.25□□□□□ -1.41
UME1YPL139C SED1Q01589 338 aa6.25□□□□□ -1.41
UME1YPL139C SKO1Q02100 647 aa6.25□□□□□ -1.41
UME1YPL139C RPL6AQ02326 176 aaKnown RBP6.25□□□□□ -1.41
UME1YPL139C IPK1Q06667 281 aa6.25□□□□□ -1.41
UME1YPL139C FIT3Q08907 204 aa6.25□□□□□ -1.41
UME1YPL139C LSO1Q3E827 93 aa6.25□□□□□ -1.41
UME1YPL139C RIB3Q99258 208 aa6.25□□□□□ -1.41
UME1YPL139C SAM35P14693 329 aa6.24□□□□□ -1.41
UME1YPL139C DAL80P26343 269 aa6.24□□□□□ -1.41
UME1YPL139C DBF20P32328 564 aa6.24□□□□□ -1.41
UME1YPL139C PRS3P38689 320 aaKnown RBP6.24□□□□□ -1.41
UME1YPL139C RPS20P38701 121 aaKnown RBP6.24□□□□□ -1.41
UME1YPL139C SSY5P47002 699 aa6.24□□□□□ -1.41
UME1YPL139C TIM10P87108 93 aa6.24□□□□□ -1.41
UME1YPL139C APM1Q00776 475 aaPredicted RBP6.24□□□□□ -1.41
UME1YPL139C ACS1Q01574 713 aa6.24□□□□□ -1.41
UME1YPL139C PET191Q02772 108 aa6.24□□□□□ -1.41
UME1YPL139C RNH1Q04740 348 aa6.24□□□□□ -1.41
UME1YPL139C MEU1Q07938 337 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
UME1YPL139C MCH4Q08268 501 aa6.24□□□□□ -1.41
UME1YPL139C YOR289WQ12012 251 aaPredicted RBP6.24□□□□□ -1.41
UME1YPL139C YOR097CQ12274 175 aaPredicted RBP6.24□□□□□ -1.41
UME1YPL139C MCT1Q12283 360 aa6.24□□□□□ -1.41
UME1YPL139C KIN28P06242 306 aa6.23□□□□□ -1.41
UME1YPL139C ATR1P13090 542 aa6.23□□□□□ -1.41
UME1YPL139C STE18P18852 110 aa6.23□□□□□ -1.41
UME1YPL139C URE2P23202 354 aaKnown RBP6.23□□□□□ -1.41
UME1YPL139C RSM22P36056 628 aa6.23□□□□□ -1.41
UME1YPL139C MLH1P38920 769 aa6.23□□□□□ -1.41
UME1YPL139C THO1P40040 218 aaKnown RBP6.23□□□□□ -1.41
UME1YPL139C POP1P41812 875 aa6.23□□□□□ -1.41
UME1YPL139C MNT4P53745 580 aa6.23□□□□□ -1.41
UME1YPL139C TEX1P53851 422 aaKnown RBP6.23□□□□□ -1.41
UME1YPL139C NUP116Q02630 1113 aa6.23□□□□□ -1.41
UME1YPL139C RSM28Q03430 361 aa6.23□□□□□ -1.41
UME1YPL139C IZH2Q12442 317 aa6.23□□□□□ -1.41
UME1YPL139C RPS13P05756 151 aaKnown RBP6.22□□□□□ -1.41
UME1YPL139C PRB1P09232 635 aa6.22□□□□□ -1.41
UME1YPL139C OAC1P32332 324 aa6.22□□□□□ -1.41
UME1YPL139C SPC29P33419 253 aa6.22□□□□□ -1.41
UME1YPL139C SPT10P35208 640 aa6.22□□□□□ -1.41
UME1YPL139C ECM14P38836 430 aa6.22□□□□□ -1.41
UME1YPL139C BUR6P40096 142 aa6.22□□□□□ -1.41
UME1YPL139C YIL029CP40538 142 aa6.22□□□□□ -1.41
UME1YPL139C PFS2P42841 465 aaKnown RBP6.22□□□□□ -1.41
UME1YPL139C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
UME1YPL139C YLR345WQ06137 509 aa6.22□□□□□ -1.41
UME1YPL139C YDL114WQ07530 308 aa6.22□□□□□ -1.41
UME1YPL139C PDE2P06776 526 aa6.21□□□□□ -1.41
UME1YPL139C CDC34P14682 295 aa6.21□□□□□ -1.41
UME1YPL139C SPO7P18410 259 aa6.21□□□□□ -1.41
UME1YPL139C CNA1P23287 553 aa6.21□□□□□ -1.41
UME1YPL139C STE50P25344 346 aa6.21□□□□□ -1.41
UME1YPL139C SWP82P43554 623 aa6.21□□□□□ -1.41
UME1YPL139C IDS2P46958 469 aa6.21□□□□□ -1.41
UME1YPL139C MDE1P47095 244 aa6.21□□□□□ -1.41
UME1YPL139C PEF1P53238 335 aa6.21□□□□□ -1.41
UME1YPL139C CRZ1P53968 678 aa6.21□□□□□ -1.41
UME1YPL139C YPL077CQ02831 240 aa6.21□□□□□ -1.41
UME1YPL139C YMR279CQ03263 540 aa6.21□□□□□ -1.41
UME1YPL139C YMD8Q03697 442 aa6.21□□□□□ -1.41
UME1YPL139C ERG4P25340 473 aa6.2□□□□□ -1.42
UME1YPL139C BOS1P25385 244 aa6.2□□□□□ -1.42
UME1YPL139C NAB2P32505 525 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
UME1YPL139C PUB1P32588 453 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42 RIP-Chip
UME1YPL139C MKS1P34072 584 aa6.2□□□□□ -1.42
UME1YPL139C YBR138CP38277 524 aa6.2□□□□□ -1.42
UME1YPL139C YBR285WP38354 144 aa6.2□□□□□ -1.42
UME1YPL139C PIG2P40187 538 aa6.2□□□□□ -1.42
UME1YPL139C ATF1P40353 525 aa6.2□□□□□ -1.42
UME1YPL139C SFH5P47008 294 aa6.2□□□□□ -1.42
UME1YPL139C NQM1P53228 333 aaPredicted RBP6.2□□□□□ -1.42
UME1YPL139C SNZ1Q03148 297 aa6.2□□□□□ -1.42
UME1YPL139C HOT1Q03213 719 aa6.2□□□□□ -1.42
UME1YPL139C MRPL51Q06090 140 aaPredicted RBP6.2□□□□□ -1.42
UME1YPL139C SSK1Q07084 712 aa6.2□□□□□ -1.42
UME1YPL139C SNA4Q07549 140 aa6.2□□□□□ -1.42
UME1YPL139C COX5BP00425 151 aa6.19□□□□□ -1.42
UME1YPL139C NDC1P32500 655 aa6.19□□□□□ -1.42
UME1YPL139C GLC7P32598 312 aaKnown RBP6.19□□□□□ -1.42
UME1YPL139C CLB6P32943 380 aa6.19□□□□□ -1.42
UME1YPL139C YBR184WP38299 523 aa6.19□□□□□ -1.42
UME1YPL139C EGT2P42835 1041 aa6.19□□□□□ -1.42
UME1YPL139C IRC5P43610 853 aa6.19□□□□□ -1.42
UME1YPL139C UBC13P52490 153 aa6.19□□□□□ -1.42
UME1YPL139C YIP5P53108 310 aa6.19□□□□□ -1.42
UME1YPL139C SAY1P53324 424 aa6.19□□□□□ -1.42
UME1YPL139C COG5P53951 403 aa6.19□□□□□ -1.42
UME1YPL139C RVB1Q03940 463 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms