RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W EMC2P47133 292 aaKnown RBP1.75□□□□□ -2.13
BRO1YPL084W YPT32P51996 222 aaKnown RBP1.75□□□□□ -2.13
BRO1YPL084W IES4Q08561 116 aa1.75□□□□□ -2.13
BRO1YPL084W RRP36Q12481 300 aaPredicted RBP1.75□□□□□ -2.13
BRO1YPL084W HSL1P34244 1518 aa1.74□□□□□ -2.13
BRO1YPL084W DAL5P15365 543 aa1.74□□□□□ -2.13
BRO1YPL084W YCR025CP25352 136 aa1.74□□□□□ -2.13
BRO1YPL084W ASP1P38986 381 aaPredicted RBP1.74□□□□□ -2.13
BRO1YPL084W SMD1Q02260 146 aaPredicted RBP1.74□□□□□ -2.13
BRO1YPL084W SPP2Q02521 185 aa1.74□□□□□ -2.13
BRO1YPL084W DPP1Q05521 289 aa1.74□□□□□ -2.13
BRO1YPL084W DIB1Q06819 143 aaPredicted RBP1.74□□□□□ -2.13
BRO1YPL084W BPT1P14772 1559 aa1.74□□□□□ -2.13
BRO1YPL084W DAL81P21657 970 aa1.74□□□□□ -2.13
BRO1YPL084W IMP1P28627 190 aa1.74□□□□□ -2.13
BRO1YPL084W AIM29P36154 155 aa1.74□□□□□ -2.13
BRO1YPL084W EDC2P40023 145 aaPredicted RBP1.74□□□□□ -2.13
BRO1YPL084W YIL012WP40551 113 aa1.74□□□□□ -2.13
BRO1YPL084W RPN14P53196 417 aa1.74□□□□□ -2.13
BRO1YPL084W CPD1P53314 239 aa1.74□□□□□ -2.13
BRO1YPL084W ACT1P60010 375 aaKnown RBP1.74□□□□□ -2.13
BRO1YPL084W ARC18Q05933 178 aaKnown RBP1.74□□□□□ -2.13
BRO1YPL084W FMT1P32785 401 aa1.73□□□□□ -2.13
BRO1YPL084W YFL064CP43540 174 aa1.73□□□□□ -2.13
BRO1YPL084W MRX5P47007 382 aa1.73□□□□□ -2.13
BRO1YPL084W YNL040WP53960 456 aaPredicted RBP1.73□□□□□ -2.13
BRO1YPL084W YPL113CQ02961 396 aa1.73□□□□□ -2.13
BRO1YPL084W YMR209CQ03648 457 aa1.73□□□□□ -2.13
BRO1YPL084W YOR114WQ12219 294 aa1.73□□□□□ -2.13
BRO1YPL084W AEP1P32493 518 aa1.73□□□□□ -2.13
BRO1YPL084W MRPL3P36516 390 aa1.73□□□□□ -2.13
BRO1YPL084W MBA1P38300 278 aa1.73□□□□□ -2.13
BRO1YPL084W YIR035CP40579 254 aa1.73□□□□□ -2.13
BRO1YPL084W PRP24P49960 444 aaKnown RBP1.73□□□□□ -2.13
BRO1YPL084W TPN1P53099 579 aa1.73□□□□□ -2.13
BRO1YPL084W VBA1Q04301 562 aa1.73□□□□□ -2.13
BRO1YPL084W CSI1Q04368 295 aa1.73□□□□□ -2.13
BRO1YPL084W YLL007CQ07799 665 aa1.73□□□□□ -2.13
BRO1YPL084W YAL063C-AQ3E791 96 aa1.73□□□□□ -2.13
BRO1YPL084W YCF1P39109 1515 aaKnown RBP1.72□□□□□ -2.13
BRO1YPL084W CUP2P15315 225 aa1.72□□□□□ -2.13
BRO1YPL084W TPS2P31688 896 aaKnown RBP1.72□□□□□ -2.13
BRO1YPL084W VPH2P32341 215 aa1.72□□□□□ -2.13
BRO1YPL084W PRY2P36110 329 aa1.72□□□□□ -2.13
BRO1YPL084W KRE29P40026 464 aa1.72□□□□□ -2.13
BRO1YPL084W AVT7P40501 490 aa1.72□□□□□ -2.13
BRO1YPL084W PEX31P53203 462 aa1.72□□□□□ -2.13
BRO1YPL084W HIR3P47171 1648 aa1.72□□□□□ -2.13
BRO1YPL084W SUA5P32579 426 aa1.72□□□□□ -2.13
BRO1YPL084W GCG1P32656 232 aaKnown RBP1.72□□□□□ -2.13
BRO1YPL084W LSB1P53281 241 aa1.72□□□□□ -2.13
BRO1YPL084W ZRG17P53735 605 aa1.72□□□□□ -2.13
BRO1YPL084W MRS2Q01926 470 aa1.72□□□□□ -2.13
BRO1YPL084W CDC42P19073 191 aa1.71□□□□□ -2.14
BRO1YPL084W RCY1P39531 840 aa1.71□□□□□ -2.14
BRO1YPL084W SEN34P39707 275 aa1.71□□□□□ -2.14
BRO1YPL084W PFS2P42841 465 aaKnown RBP1.71□□□□□ -2.14
BRO1YPL084W LIF1P53150 421 aa1.71□□□□□ -2.14
BRO1YPL084W MPP6P53725 186 aaPredicted RBP1.71□□□□□ -2.14
BRO1YPL084W CDC14Q00684 551 aa1.71□□□□□ -2.14
BRO1YPL084W YML018CQ03730 393 aa1.71□□□□□ -2.14
BRO1YPL084W TAF9Q05027 157 aa1.71□□□□□ -2.14
BRO1YPL084W PET494P07390 489 aaPredicted RBP1.71□□□□□ -2.14
BRO1YPL084W VPS1P21576 704 aaKnown RBP1.71□□□□□ -2.14
BRO1YPL084W SCC4P40090 624 aa1.71□□□□□ -2.14
BRO1YPL084W YIL059CP40520 121 aa1.71□□□□□ -2.14
BRO1YPL084W COG7P53195 279 aa1.71□□□□□ -2.14
BRO1YPL084W KAP95Q06142 861 aaKnown RBP1.71□□□□□ -2.14
BRO1YPL084W SFH1Q06168 426 aa1.71□□□□□ -2.14
BRO1YPL084W YPR195CQ06594 109 aa1.71□□□□□ -2.14
BRO1YPL084W YPL264CQ08980 353 aa1.71□□□□□ -2.14
BRO1YPL084W SSK22P25390 1331 aaPredicted RBP1.71□□□□□ -2.14
BRO1YPL084W RPL24AP04449 155 aaKnown RBP1.7□□□□□ -2.14
BRO1YPL084W ARO4P32449 370 aaKnown RBP1.7□□□□□ -2.14
BRO1YPL084W CSE1P33307 960 aa1.7□□□□□ -2.14
BRO1YPL084W AST1P35183 429 aa1.7□□□□□ -2.14
BRO1YPL084W COS4P43542 379 aa1.7□□□□□ -2.14
BRO1YPL084W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14 RIP-Chip
BRO1YPL084W GMC2Q06201 188 aa1.7□□□□□ -2.14
BRO1YPL084W ARV1Q06541 321 aa1.7□□□□□ -2.14
BRO1YPL084W MET16P18408 261 aaPredicted RBP1.7□□□□□ -2.14
BRO1YPL084W POF1P25576 258 aa1.7□□□□□ -2.14
BRO1YPL084W COT1P32798 439 aa1.7□□□□□ -2.14
BRO1YPL084W ATG12P38316 186 aa1.7□□□□□ -2.14
BRO1YPL084W YJL118WP47022 219 aa1.7□□□□□ -2.14
BRO1YPL084W IBA57P47158 497 aa1.7□□□□□ -2.14
BRO1YPL084W UFD1P53044 361 aa1.7□□□□□ -2.14
BRO1YPL084W VPS60Q03390 229 aa1.7□□□□□ -2.14
BRO1YPL084W PER33Q12144 273 aa1.7□□□□□ -2.14
BRO1YPL084W IES3Q12345 250 aa1.7□□□□□ -2.14
BRO1YPL084W RPS3P05750 240 aaKnown RBP1.69□□□□□ -2.14
BRO1YPL084W ATG15P25641 520 aa1.69□□□□□ -2.14
BRO1YPL084W SLX1P38324 304 aa1.69□□□□□ -2.14
BRO1YPL084W HSM3P38348 480 aa1.69□□□□□ -2.14
BRO1YPL084W PET100P38958 111 aa1.69□□□□□ -2.14
BRO1YPL084W AVT6P40074 448 aa1.69□□□□□ -2.14
BRO1YPL084W COA1P40452 197 aa1.69□□□□□ -2.14
BRO1YPL084W SYS1P41544 203 aa1.69□□□□□ -2.14
BRO1YPL084W KAP114P53067 1004 aa1.69□□□□□ -2.14
BRO1YPL084W GTO3Q04806 366 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms