RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C MED2Q12124 431 aa7□□□□□ -1.29
LSP1YPL004C SED4P25365 1065 aa6.99□□□□□ -1.29
LSP1YPL004C ITR1P30605 584 aa6.99□□□□□ -1.29
LSP1YPL004C MRPS5P33759 307 aa6.99□□□□□ -1.29
LSP1YPL004C MTR2P34232 184 aaKnown RBP6.99□□□□□ -1.29
LSP1YPL004C SHE1P38200 338 aa6.99□□□□□ -1.29
LSP1YPL004C YBR096WP38256 230 aa6.99□□□□□ -1.29
LSP1YPL004C SSZ1P38788 538 aaKnown RBP6.99□□□□□ -1.29
LSP1YPL004C YER084WP40057 128 aa6.99□□□□□ -1.29
LSP1YPL004C BUR6P40096 142 aa6.99□□□□□ -1.29
LSP1YPL004C MOB2P43563 287 aa6.99□□□□□ -1.29
LSP1YPL004C NUP42P49686 430 aaKnown RBP6.99□□□□□ -1.29
LSP1YPL004C ACS1Q01574 713 aa6.99□□□□□ -1.29
LSP1YPL004C SYC1Q08553 188 aaPredicted RBP6.99□□□□□ -1.29
LSP1YPL004C ACF2Q12168 779 aa6.99□□□□□ -1.29
LSP1YPL004C YGK3Q12222 375 aaPredicted RBP6.99□□□□□ -1.29
LSP1YPL004C PDE2P06776 526 aa6.98□□□□□ -1.29
LSP1YPL004C SPS100P13130 326 aa6.98□□□□□ -1.29
LSP1YPL004C GOS1P38736 223 aa6.98□□□□□ -1.29
LSP1YPL004C PFS2P42841 465 aaKnown RBP6.98□□□□□ -1.29
LSP1YPL004C SIP18P50263 79 aa6.98□□□□□ -1.29
LSP1YPL004C RMD9P53140 646 aaKnown RBP6.98□□□□□ -1.29
LSP1YPL004C TNA1P53322 534 aa6.98□□□□□ -1.29
LSP1YPL004C IPK1Q06667 281 aa6.98□□□□□ -1.29
LSP1YPL004C GSH2Q08220 491 aa6.98□□□□□ -1.29
LSP1YPL004C TY1A-BLQ12266 440 aa6.98□□□□□ -1.29
LSP1YPL004C IZH2Q12442 317 aa6.98□□□□□ -1.29
LSP1YPL004C YGL041W-AP0C5N3 154 aa6.97□□□□□ -1.29
LSP1YPL004C RPL35AP0CX84 120 aaKnown RBP6.97□□□□□ -1.29
LSP1YPL004C RPL35BP0CX85 120 aaKnown RBP6.97□□□□□ -1.29
LSP1YPL004C ENA1P13587 1091 aa6.97□□□□□ -1.29
LSP1YPL004C MDH1P17505 334 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
LSP1YPL004C STE18P18852 110 aa6.97□□□□□ -1.29
LSP1YPL004C RPA135P22138 1203 aaKnown RBP6.97□□□□□ -1.29
LSP1YPL004C MEK1P24719 497 aaPredicted RBP6.97□□□□□ -1.29
LSP1YPL004C AVT6P40074 448 aa6.97□□□□□ -1.29
LSP1YPL004C VOA1P53262 265 aa6.97□□□□□ -1.29
LSP1YPL004C ENA2Q01896 1091 aa6.97□□□□□ -1.29
LSP1YPL004C NOG1Q02892 647 aaKnown RBP6.97□□□□□ -1.29
LSP1YPL004C YLR173WQ06247 608 aa6.97□□□□□ -1.29
LSP1YPL004C MCT1Q12283 360 aa6.97□□□□□ -1.29
LSP1YPL004C RRI1Q12468 440 aa6.97□□□□□ -1.29
LSP1YPL004C ENA5Q12691 1091 aa6.97□□□□□ -1.29
LSP1YPL004C KRR1P25586 316 aaPredicted RBP6.96□□□□□ -1.3
LSP1YPL004C VMA6P32366 345 aaKnown RBP6.96□□□□□ -1.3
LSP1YPL004C RPC34P32910 317 aa6.96□□□□□ -1.3
LSP1YPL004C YPK3P38070 525 aa6.96□□□□□ -1.3
LSP1YPL004C DTR1P38125 572 aa6.96□□□□□ -1.3
LSP1YPL004C QDR1P40475 563 aa6.96□□□□□ -1.3
LSP1YPL004C SDP1P40479 209 aa6.96□□□□□ -1.3
LSP1YPL004C LOH1P47055 219 aa6.96□□□□□ -1.3
LSP1YPL004C CCC1P47818 322 aa6.96□□□□□ -1.3
LSP1YPL004C SAY1P53324 424 aa6.96□□□□□ -1.3
LSP1YPL004C MRX8Q05473 314 aa6.96□□□□□ -1.3
LSP1YPL004C RKM1Q08961 583 aaPredicted RBP6.96□□□□□ -1.3
LSP1YPL004C MET17P06106 444 aa6.95□□□□□ -1.3
LSP1YPL004C KIN28P06242 306 aa6.95□□□□□ -1.3
LSP1YPL004C PUT3P25502 979 aaPredicted RBP6.95□□□□□ -1.3
LSP1YPL004C MTC2P34246 357 aa6.95□□□□□ -1.3
LSP1YPL004C CLG1P35190 452 aa6.95□□□□□ -1.3
LSP1YPL004C PRS3P38689 320 aaKnown RBP6.95□□□□□ -1.3
LSP1YPL004C YIP5P53108 310 aa6.95□□□□□ -1.3
LSP1YPL004C YDR391CQ04170 232 aa6.95□□□□□ -1.3
LSP1YPL004C THI72Q08579 599 aa6.95□□□□□ -1.3
LSP1YPL004C FIT3Q08907 204 aa6.95□□□□□ -1.3
LSP1YPL004C NCE102Q12207 173 aaRIP-Chip data6.95□□□□□ -1.3not detected
LSP1YPL004C YOL114CQ12322 202 aa6.95□□□□□ -1.3
LSP1YPL004C COX5BP00425 151 aa6.94□□□□□ -1.3
LSP1YPL004C DBF2P22204 572 aa6.94□□□□□ -1.3
LSP1YPL004C PUB1P32588 453 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3 RIP-Chip
LSP1YPL004C SDS22P36047 338 aa6.94□□□□□ -1.3
LSP1YPL004C THI2P38141 450 aa6.94□□□□□ -1.3
LSP1YPL004C YBR220CP38318 560 aa6.94□□□□□ -1.3
LSP1YPL004C PUG1P40100 303 aa6.94□□□□□ -1.3
LSP1YPL004C PPT1P53043 513 aa6.94□□□□□ -1.3
LSP1YPL004C MTM1P53320 366 aa6.94□□□□□ -1.3
LSP1YPL004C ASI3P53983 676 aa6.94□□□□□ -1.3
LSP1YPL004C RTN2Q12443 393 aa6.94□□□□□ -1.3
LSP1YPL004C PDA1P16387 420 aaKnown RBP6.93□□□□□ -1.3
LSP1YPL004C PCL1P24867 279 aa6.93□□□□□ -1.3
LSP1YPL004C ERG4P25340 473 aa6.93□□□□□ -1.3
LSP1YPL004C BOS1P25385 244 aa6.93□□□□□ -1.3
LSP1YPL004C TAT1P38085 619 aa6.93□□□□□ -1.3
LSP1YPL004C PMT6P42934 759 aa6.93□□□□□ -1.3
LSP1YPL004C PAU12P53343 120 aa6.93□□□□□ -1.3
LSP1YPL004C TMA20P89886 181 aaPredicted RBP6.93□□□□□ -1.3
LSP1YPL004C RSM23Q01163 450 aa6.93□□□□□ -1.3
LSP1YPL004C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
LSP1YPL004C NEJ1Q06148 342 aa6.93□□□□□ -1.3
LSP1YPL004C BRE4Q07660 1125 aa6.93□□□□□ -1.3
LSP1YPL004C PML1Q07930 204 aaPredicted RBP6.93□□□□□ -1.3
LSP1YPL004C YOR378WQ08902 515 aa6.93□□□□□ -1.3
LSP1YPL004C FRE6Q12473 712 aa6.93□□□□□ -1.3
LSP1YPL004C UTP20P35194 2493 aaKnown RBP6.92□□□□□ -1.3
LSP1YPL004C COX9P07255 59 aa6.92□□□□□ -1.3
LSP1YPL004C CLB2P24869 491 aa6.92□□□□□ -1.3
LSP1YPL004C CLB6P32943 380 aa6.92□□□□□ -1.3
LSP1YPL004C YKL187CP34231 750 aa6.92□□□□□ -1.3
LSP1YPL004C ANR2P36090 516 aaPredicted RBP6.92□□□□□ -1.3
LSP1YPL004C YKR015CP36111 568 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms