RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C MOH1P38191 138 aa3.04□□□□□ -1.92
SQS1YNL224C YHR127WP38833 243 aaKnown RBP3.04□□□□□ -1.92
SQS1YNL224C YHR210CP38893 341 aa3.04□□□□□ -1.92
SQS1YNL224C LSM4P40070 187 aaKnown RBP3.04□□□□□ -1.92
SQS1YNL224C MOB1P40484 314 aa3.04□□□□□ -1.92
SQS1YNL224C YFR020WP43600 232 aa3.04□□□□□ -1.92
SQS1YNL224C ERJ5P43613 295 aaPredicted RBP3.04□□□□□ -1.92
SQS1YNL224C TAX4P47030 604 aa3.04□□□□□ -1.92
SQS1YNL224C UBC9P50623 157 aaPredicted RBP3.04□□□□□ -1.92
SQS1YNL224C AIF1P52923 378 aa3.04□□□□□ -1.92
SQS1YNL224C YIP1P53039 248 aa3.04□□□□□ -1.92
SQS1YNL224C ARO8P53090 500 aaKnown RBP3.04□□□□□ -1.92
SQS1YNL224C YIP5P53108 310 aa3.04□□□□□ -1.92
SQS1YNL224C USE1P53146 245 aa3.04□□□□□ -1.92
SQS1YNL224C YGR283CP53336 341 aaPredicted RBP3.04□□□□□ -1.92
SQS1YNL224C SMP3Q04174 516 aa3.04□□□□□ -1.92
SQS1YNL224C TAF9Q05027 157 aa3.04□□□□□ -1.92
SQS1YNL224C BNA5Q05979 453 aa3.04□□□□□ -1.92
SQS1YNL224C GAS2Q06135 555 aa3.04□□□□□ -1.92
SQS1YNL224C HNT3Q08702 217 aa3.04□□□□□ -1.92
SQS1YNL224C PER33Q12144 273 aa3.04□□□□□ -1.92
SQS1YNL224C YPR063CQ12160 140 aa3.04□□□□□ -1.92
SQS1YNL224C NBP2Q12163 236 aa3.04□□□□□ -1.92
SQS1YNL224C COX17Q12287 69 aa3.04□□□□□ -1.92
SQS1YNL224C TRM11Q12463 433 aa3.04□□□□□ -1.92
SQS1YNL224C FOL3Q12676 427 aaPredicted RBP3.04□□□□□ -1.92
SQS1YNL224C SLO1Q3E784 85 aa3.04□□□□□ -1.92
SQS1YNL224C YLR099W-AQ3E798 87 aa3.04□□□□□ -1.92
SQS1YNL224C ESP1Q03018 1630 aa3.04□□□□□ -1.92
SQS1YNL224C CHO1P08456 276 aa3.04□□□□□ -1.92
SQS1YNL224C MSS51P32335 436 aa3.04□□□□□ -1.92
SQS1YNL224C SRP68P38687 599 aaKnown RBP3.04□□□□□ -1.92
SQS1YNL224C MIT1P40002 666 aa3.04□□□□□ -1.92
SQS1YNL224C BST1P43571 1029 aa3.04□□□□□ -1.92
SQS1YNL224C IKS1P47042 667 aa3.04□□□□□ -1.92
SQS1YNL224C YGL039WP53183 348 aaKnown RBP3.04□□□□□ -1.92
SQS1YNL224C MPA43P53583 542 aaPredicted RBP3.04□□□□□ -1.92
SQS1YNL224C UBC7Q02159 165 aa3.04□□□□□ -1.92
SQS1YNL224C TMA23Q03525 211 aa3.04□□□□□ -1.92
SQS1YNL224C AIM34Q03673 198 aa3.04□□□□□ -1.92
SQS1YNL224C HOF1Q05080 669 aa3.04□□□□□ -1.92
SQS1YNL224C MCH1Q07376 486 aa3.04□□□□□ -1.92
SQS1YNL224C IRC13Q08630 104 aa3.04□□□□□ -1.92
SQS1YNL224C BI3Q9ZZW7 517 aa3.04□□□□□ -1.92
SQS1YNL224C GDH1P07262 454 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C SEC22P22214 214 aa3.03□□□□□ -1.92
SQS1YNL224C GPI12P23797 304 aa3.03□□□□□ -1.92
SQS1YNL224C BUB3P26449 341 aa3.03□□□□□ -1.92
SQS1YNL224C COQ3P27680 312 aa3.03□□□□□ -1.92
SQS1YNL224C NTH1P32356 751 aa3.03□□□□□ -1.92
SQS1YNL224C SGE1P33335 543 aa3.03□□□□□ -1.92
SQS1YNL224C PAD1P33751 242 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SQS1YNL224C HES1P35843 434 aa3.03□□□□□ -1.92
SQS1YNL224C FRM2P37261 193 aa3.03□□□□□ -1.92
SQS1YNL224C TRM5P38793 499 aa3.03□□□□□ -1.92
SQS1YNL224C SNU13P39990 126 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C SDP1P40479 209 aa3.03□□□□□ -1.92
SQS1YNL224C GLR1P41921 483 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C AIM23P47015 356 aa3.03□□□□□ -1.92
SQS1YNL224C ADO1P47143 340 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C COS10P52924 374 aa3.03□□□□□ -1.92
SQS1YNL224C ROG1P53118 685 aa3.03□□□□□ -1.92
SQS1YNL224C YNR071CP53757 342 aa3.03□□□□□ -1.92
SQS1YNL224C STP1Q00947 519 aa3.03□□□□□ -1.92
SQS1YNL224C YPL068CQ02749 293 aa3.03□□□□□ -1.92
SQS1YNL224C LRS4Q04087 347 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C MRX8Q05473 314 aa3.03□□□□□ -1.92
SQS1YNL224C WTM2Q12206 467 aa3.03□□□□□ -1.92
SQS1YNL224C PST2Q12335 198 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C COX3P00420 269 aa3.03□□□□□ -1.92
SQS1YNL224C RPB5P20434 215 aa3.03□□□□□ -1.92
SQS1YNL224C SLY41P22215 453 aa3.03□□□□□ -1.92
SQS1YNL224C SFK1P35735 353 aa3.03□□□□□ -1.92
SQS1YNL224C SHE2P36068 246 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SQS1YNL224C HIS2P38635 335 aa3.03□□□□□ -1.92
SQS1YNL224C CHL4P38907 458 aa3.03□□□□□ -1.92
SQS1YNL224C SSN3P39073 555 aa3.03□□□□□ -1.92
SQS1YNL224C YER076CP40049 302 aa3.03□□□□□ -1.92
SQS1YNL224C AZF1P41696 914 aa3.03□□□□□ -1.92
SQS1YNL224C POP1P41812 875 aa3.03□□□□□ -1.92
SQS1YNL224C CIN2P46670 268 aa3.03□□□□□ -1.92
SQS1YNL224C BUD9P53226 547 aa3.03□□□□□ -1.92
SQS1YNL224C MKC7P53379 596 aa3.03□□□□□ -1.92
SQS1YNL224C HHO1P53551 258 aa3.03□□□□□ -1.92
SQS1YNL224C NSG2P53898 299 aa3.03□□□□□ -1.92
SQS1YNL224C ARK1P53974 638 aa3.03□□□□□ -1.92
SQS1YNL224C YPL067CQ02754 198 aa3.03□□□□□ -1.92
SQS1YNL224C GIP3Q03016 1276 aa3.03□□□□□ -1.92
SQS1YNL224C GOT1Q03554 138 aa3.03□□□□□ -1.92
SQS1YNL224C FMN1Q03778 218 aa3.03□□□□□ -1.92
SQS1YNL224C SEC13Q04491 297 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C SEI1Q06058 285 aa3.03□□□□□ -1.92
SQS1YNL224C YLR446WQ06204 433 aa3.03□□□□□ -1.92
SQS1YNL224C PRP11Q07350 266 aaPredicted RBP3.03□□□□□ -1.92
SQS1YNL224C YOR059CQ08448 450 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SQS1YNL224C YLL058WQ12198 575 aa3.03□□□□□ -1.92
SQS1YNL224C LPX1Q12405 387 aaKnown RBP3.03□□□□□ -1.92
SQS1YNL224C YJR112W-AQ3E743 109 aa3.03□□□□□ -1.92
SQS1YNL224C IZH4Q99393 312 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms