RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C PTR2P32901 601 aa1.48□□□□□ -2.17
SFB2YNL049C RIM2P38127 377 aa1.48□□□□□ -2.17
SFB2YNL049C GDT1P38301 280 aaPredicted RBP1.48□□□□□ -2.17
SFB2YNL049C NPT1P39683 429 aaKnown RBP1.48□□□□□ -2.17
SFB2YNL049C SHO1P40073 367 aa1.48□□□□□ -2.17
SFB2YNL049C EFM3P47163 339 aa1.48□□□□□ -2.17
SFB2YNL049C PMT5P52867 743 aa1.48□□□□□ -2.17
SFB2YNL049C GOR1P53839 350 aa1.48□□□□□ -2.17
SFB2YNL049C ODC1Q03028 310 aa1.48□□□□□ -2.17
SFB2YNL049C VPS20Q04272 221 aa1.48□□□□□ -2.17
SFB2YNL049C CDC123Q05791 360 aa1.48□□□□□ -2.17
SFB2YNL049C YLR413WQ06689 675 aa1.48□□□□□ -2.17
SFB2YNL049C SKI7Q08491 747 aaPredicted RBP1.48□□□□□ -2.17
SFB2YNL049C YCL012CQ8J0M4 134 aa1.48□□□□□ -2.17
SFB2YNL049C CDC39P25655 2108 aaKnown RBP1.48□□□□□ -2.17
SFB2YNL049C SPT3P06844 337 aa1.48□□□□□ -2.17
SFB2YNL049C DST1P07273 309 aa1.48□□□□□ -2.17
SFB2YNL049C YFR010W-AP0C5N0 62 aa1.48□□□□□ -2.17
SFB2YNL049C GPA2P10823 449 aa1.48□□□□□ -2.17
SFB2YNL049C CDC23P16522 626 aa1.48□□□□□ -2.17
SFB2YNL049C LSB5P25369 354 aa1.48□□□□□ -2.17
SFB2YNL049C TIP1P27654 210 aaPredicted RBP1.48□□□□□ -2.17
SFB2YNL049C MTC4P38335 694 aaKnown RBP1.48□□□□□ -2.17
SFB2YNL049C MSG5P38590 489 aa1.48□□□□□ -2.17
SFB2YNL049C YER079WP40052 210 aaKnown RBP1.48□□□□□ -2.17
SFB2YNL049C APQ12P40532 138 aa1.48□□□□□ -2.17
SFB2YNL049C RPR2P40571 144 aa1.48□□□□□ -2.17
SFB2YNL049C PHB1P40961 287 aa1.48□□□□□ -2.17
SFB2YNL049C DIM1P41819 318 aaKnown RBP1.48□□□□□ -2.17
SFB2YNL049C TOS2P50078 622 aa1.48□□□□□ -2.17
SFB2YNL049C POP6P53218 158 aa1.48□□□□□ -2.17
SFB2YNL049C RSN1Q03516 953 aa1.48□□□□□ -2.17
SFB2YNL049C BOP2Q06150 570 aa1.48□□□□□ -2.17
SFB2YNL049C TAZ1Q06510 381 aa1.48□□□□□ -2.17
SFB2YNL049C REX4Q08237 289 aa1.48□□□□□ -2.17
SFB2YNL049C RIO1Q12196 484 aaKnown RBP1.48□□□□□ -2.17
SFB2YNL049C AYT1Q12226 474 aa1.48□□□□□ -2.17
SFB2YNL049C RUP1Q12242 671 aa1.48□□□□□ -2.17
SFB2YNL049C RRP36Q12481 300 aaPredicted RBP1.48□□□□□ -2.17
SFB2YNL049C MHF1Q3E835 90 aa1.48□□□□□ -2.17
SFB2YNL049C YPR096CO13587 100 aa1.47□□□□□ -2.17
SFB2YNL049C UNG1P12887 359 aa1.47□□□□□ -2.17
SFB2YNL049C TAL1P15019 335 aaKnown RBP1.47□□□□□ -2.17
SFB2YNL049C SCO1P23833 295 aa1.47□□□□□ -2.17
SFB2YNL049C RNA14P25298 677 aaKnown RBP1.47□□□□□ -2.17
SFB2YNL049C PHA2P32452 334 aa1.47□□□□□ -2.17
SFB2YNL049C MEI5P32489 222 aa1.47□□□□□ -2.17
SFB2YNL049C SUR1P33300 382 aa1.47□□□□□ -2.17
SFB2YNL049C HIS2P38635 335 aa1.47□□□□□ -2.17
SFB2YNL049C RRF1P38771 230 aa1.47□□□□□ -2.17
SFB2YNL049C SIM1P40472 476 aa1.47□□□□□ -2.17
SFB2YNL049C RPE1P46969 238 aa1.47□□□□□ -2.17
SFB2YNL049C RPA34P47006 233 aaPredicted RBP1.47□□□□□ -2.17
SFB2YNL049C GPI8P49018 411 aa1.47□□□□□ -2.17
SFB2YNL049C BIO3P50277 480 aa1.47□□□□□ -2.17
SFB2YNL049C YNR048WP53740 393 aa1.47□□□□□ -2.17
SFB2YNL049C OSH6Q02201 448 aa1.47□□□□□ -2.17
SFB2YNL049C STD1Q02794 444 aa1.47□□□□□ -2.17
SFB2YNL049C YPL039WQ03080 316 aa1.47□□□□□ -2.17
SFB2YNL049C BET5Q03630 159 aa1.47□□□□□ -2.17
SFB2YNL049C RVB1Q03940 463 aaKnown RBP1.47□□□□□ -2.17
SFB2YNL049C YLR177WQ06251 628 aa1.47□□□□□ -2.17
SFB2YNL049C SRL1Q08673 210 aa1.47□□□□□ -2.17
SFB2YNL049C NIP7Q08962 181 aaKnown RBP1.47□□□□□ -2.17
SFB2YNL049C SRL2Q12020 392 aa1.47□□□□□ -2.17
SFB2YNL049C SRN2Q99176 213 aa1.47□□□□□ -2.17
SFB2YNL049C FAS1P07149 2051 aaKnown RBP1.47□□□□□ -2.17
SFB2YNL049C HEM2P05373 342 aa1.47□□□□□ -2.17
SFB2YNL049C RPL12AP0CX53 165 aaKnown RBP1.47□□□□□ -2.17
SFB2YNL049C RPL12BP0CX54 165 aa1.47□□□□□ -2.17
SFB2YNL049C YAK1P14680 807 aa1.47□□□□□ -2.17
SFB2YNL049C RPB5P20434 215 aa1.47□□□□□ -2.17
SFB2YNL049C CKI1P20485 582 aa1.47□□□□□ -2.17
SFB2YNL049C SAG1P20840 650 aa1.47□□□□□ -2.17
SFB2YNL049C IME2P32581 645 aa1.47□□□□□ -2.17
SFB2YNL049C SMF2P38778 549 aa1.47□□□□□ -2.17
SFB2YNL049C MST28P39552 234 aa1.47□□□□□ -2.17
SFB2YNL049C YER184CP39961 794 aa1.47□□□□□ -2.17
SFB2YNL049C PAC11P40960 533 aa1.47□□□□□ -2.17
SFB2YNL049C YRB1P41920 201 aaKnown RBP1.47□□□□□ -2.17
SFB2YNL049C YFL064CP43540 174 aa1.47□□□□□ -2.17
SFB2YNL049C BOL2P53082 120 aa1.47□□□□□ -2.17
SFB2YNL049C YNL260CP53846 198 aa1.47□□□□□ -2.17
SFB2YNL049C MRP51Q02950 344 aa1.47□□□□□ -2.17
SFB2YNL049C YDR391CQ04170 232 aa1.47□□□□□ -2.17
SFB2YNL049C GMC1Q04399 608 aa1.47□□□□□ -2.17
SFB2YNL049C RRP9Q06506 573 aaKnown RBP1.47□□□□□ -2.17
SFB2YNL049C SGT1Q08446 395 aa1.47□□□□□ -2.17
SFB2YNL049C TIM18Q08749 192 aa1.47□□□□□ -2.17
SFB2YNL049C YPR202WQ08993 238 aa1.47□□□□□ -2.17
SFB2YNL049C YSF3P0C074 85 aaPredicted RBP1.46□□□□□ -2.18
SFB2YNL049C MSS116P15424 664 aaKnown RBP1.46□□□□□ -2.18
SFB2YNL049C RPB4P20433 221 aaPredicted RBP1.46□□□□□ -2.18
SFB2YNL049C URA10P30402 227 aa1.46□□□□□ -2.18
SFB2YNL049C UBC6P33296 250 aaPredicted RBP1.46□□□□□ -2.18
SFB2YNL049C CBF5P33322 483 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
SFB2YNL049C LOS1P33418 1100 aaPredicted RBP1.46□□□□□ -2.18
SFB2YNL049C YET1P35723 206 aa1.46□□□□□ -2.18
SFB2YNL049C PMU1P36069 295 aa1.46□□□□□ -2.18
SFB2YNL049C YCR087C-AP37263 153 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms