RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	RTC5	Q12108	567 aa	Known RBP	11.27	□□□□□ -0.61
LSM3	YLR438C-A	MED2	Q12124	431 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	COX17	Q12287	69 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	IES3	Q12345	250 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	TY1A-NL1	Q12391	440 aa	Known RBP	11.27	□□□□□ -0.61
LSM3	YLR438C-A	YEL009C-A	A0A023PZF2	135 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	RPA135	P22138	1203 aa	Known RBP	11.26	□□□□□ -0.61
LSM3	YLR438C-A	EXG1	P23776	448 aa	Known RBP	11.26	□□□□□ -0.61
LSM3	YLR438C-A	CLB2	P24869	491 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	RSM22	P36056	628 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	MRPL39	P36533	70 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	PAU24	P38155	120 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	CHS7	P38843	316 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	RTT105	P40063	208 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	CCC1	P47818	322 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	YNR040W	P53736	256 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	YDL180W	Q12301	547 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	FRE6	Q12473	712 aa		11.26	□□□□□ -0.61
LSM3	YLR438C-A	YBR056W-A	I2HB52	66 aa		11.25	□□□□□ -0.61
LSM3	YLR438C-A	XBP1	P40489	647 aa		11.25	□□□□□ -0.61
LSM3	YLR438C-A	ELA1	P53861	379 aa	Predicted RBP	11.25	□□□□□ -0.61
LSM3	YLR438C-A	YMR265C	Q03508	461 aa	Known RBP	11.25	□□□□□ -0.61
LSM3	YLR438C-A	YDR514C	Q04408	483 aa		11.25	□□□□□ -0.61
LSM3	YLR438C-A	TSR2	Q06672	205 aa	Known RBP	11.25	□□□□□ -0.61
LSM3	YLR438C-A	LUC7	Q07508	261 aa	Predicted RBP	11.25	□□□□□ -0.61
LSM3	YLR438C-A	PRS5	Q12265	496 aa	Known RBP	11.25	□□□□□ -0.61
LSM3	YLR438C-A	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	11.25	□□□□□ -0.61	not detected
LSM3	YLR438C-A	RRI1	Q12468	440 aa		11.25	□□□□□ -0.61
LSM3	YLR438C-A	PRE7	P23724	241 aa	Known RBP	11.24	□□□□□ -0.61
LSM3	YLR438C-A	MEK1	P24719	497 aa	Predicted RBP	11.24	□□□□□ -0.61
LSM3	YLR438C-A	SPT10	P35208	640 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	GPI16	P38875	610 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	SCW11	P53189	542 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	MRPL19	P53875	158 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	MRP51	Q02950	344 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	PLB2	Q03674	706 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	RCF1	Q03713	159 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	COQ11	Q05892	277 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	YLR099W-A	Q3E798	87 aa		11.24	□□□□□ -0.61
LSM3	YLR438C-A	SIR2	P06700	562 aa		11.23	□□□□□ -0.61
LSM3	YLR438C-A	RPS16A	P0CX51	143 aa	Known RBP	11.23	□□□□□ -0.61
LSM3	YLR438C-A	RPS16B	P0CX52	143 aa	Known RBP	11.23	□□□□□ -0.61
LSM3	YLR438C-A	DOA4	P32571	926 aa		11.23	□□□□□ -0.61
LSM3	YLR438C-A	AIM3	P38266	947 aa	Known RBP	11.23	□□□□□ -0.61
LSM3	YLR438C-A	GDS1	P41913	522 aa		11.23	□□□□□ -0.61
LSM3	YLR438C-A	RMD9	P53140	646 aa	Known RBP	11.23	□□□□□ -0.61
LSM3	YLR438C-A	ASI3	P53983	676 aa		11.23	□□□□□ -0.61
LSM3	YLR438C-A	AIM36	Q03798	255 aa		11.23	□□□□□ -0.61
LSM3	YLR438C-A	RAF1	Q06891	181 aa		11.23	□□□□□ -0.61
LSM3	YLR438C-A	SCEI	P03882	235 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	SBA1	P28707	216 aa	Known RBP	11.22	□□□□□ -0.61
LSM3	YLR438C-A	MTH1	P35198	433 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	SHE2	P36068	246 aa	Known RBP RIP-Chip data	11.22	□□□□□ -0.61	not detected
LSM3	YLR438C-A	GPX2	P38143	162 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	TIR3	P40552	269 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	AAD14	P42884	376 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	PMT6	P42934	759 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	PET191	Q02772	108 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	YMR252C	Q04814	134 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	MCH4	Q08268	501 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	TY1A-BL	Q12266	440 aa		11.22	□□□□□ -0.61
LSM3	YLR438C-A	DCP1	Q12517	231 aa	Predicted RBP	11.22	□□□□□ -0.61
LSM3	YLR438C-A	PDE2	P06776	526 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	COX9	P07255	59 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	MRP1	P10662	321 aa	Known RBP	11.21	□□□□□ -0.61
LSM3	YLR438C-A	MCM1	P11746	286 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	ITR1	P30605	584 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	PEX32	P38292	413 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	YJL218W	P40892	196 aa	Known RBP	11.21	□□□□□ -0.61
LSM3	YLR438C-A	PAM16	P42949	149 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	MTM1	P53320	366 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	CIK1	Q01649	594 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	TDA1	Q03533	586 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	SSY1	Q03770	852 aa		11.21	□□□□□ -0.61
LSM3	YLR438C-A	DBF2	P22204	572 aa		11.2	□□□□□ -0.62
LSM3	YLR438C-A	UBX6	P47049	396 aa		11.2	□□□□□ -0.62
LSM3	YLR438C-A	PMT5	P52867	743 aa		11.2	□□□□□ -0.62
LSM3	YLR438C-A	CPR8	P53728	308 aa		11.2	□□□□□ -0.62
LSM3	YLR438C-A	DIG2	Q03373	323 aa	Known RBP	11.2	□□□□□ -0.62
LSM3	YLR438C-A	YAP6	Q03935	383 aa		11.2	□□□□□ -0.62
LSM3	YLR438C-A	YDR387C	Q04162	555 aa		11.2	□□□□□ -0.62
LSM3	YLR438C-A	RTN2	Q12443	393 aa		11.2	□□□□□ -0.62
LSM3	YLR438C-A	CDC36	P06100	191 aa	Predicted RBP	11.19	□□□□□ -0.62
LSM3	YLR438C-A	SED4	P25365	1065 aa		11.19	□□□□□ -0.62
LSM3	YLR438C-A	IDP2	P41939	412 aa		11.19	□□□□□ -0.62
LSM3	YLR438C-A	SCY1	P53009	804 aa		11.19	□□□□□ -0.62
LSM3	YLR438C-A	IMO32	P53219	342 aa		11.19	□□□□□ -0.62
LSM3	YLR438C-A	YGR054W	P53235	642 aa	Known RBP	11.19	□□□□□ -0.62
LSM3	YLR438C-A	MKC7	P53379	596 aa		11.19	□□□□□ -0.62
LSM3	YLR438C-A	BRE4	Q07660	1125 aa		11.19	□□□□□ -0.62
LSM3	YLR438C-A	SOG2	Q08817	791 aa		11.19	□□□□□ -0.62
LSM3	YLR438C-A	SUS1	Q6WNK7	96 aa		11.19	□□□□□ -0.62
LSM3	YLR438C-A	BLM10	P43583	2143 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	GCN4	P03069	281 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	PAU2	P32612	120 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	YBR096W	P38256	230 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	YMR262W	P38430	313 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	DLS1	P40366	167 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	SLS1	P42900	643 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	LOH1	P47055	219 aa		11.18	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms