RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YPL150WQ12152 901 aa4.06□□□□□ -1.76
VPS36YLR417W NUP192P47054 1683 aa4.05□□□□□ -1.76
VPS36YLR417W RSR1P13856 272 aa4.05□□□□□ -1.76
VPS36YLR417W RPO26P20435 155 aa4.05□□□□□ -1.76
VPS36YLR417W YKT6P36015 200 aaKnown RBP4.05□□□□□ -1.76
VPS36YLR417W RPC37P36121 282 aa4.05□□□□□ -1.76
VPS36YLR417W RCK1P38622 512 aa4.05□□□□□ -1.76
VPS36YLR417W WSC4P38739 605 aa4.05□□□□□ -1.76
VPS36YLR417W IGD1P43598 195 aa4.05□□□□□ -1.76
VPS36YLR417W BIO3P50277 480 aa4.05□□□□□ -1.76
VPS36YLR417W UBC13P52490 153 aa4.05□□□□□ -1.76
VPS36YLR417W NUP84P52891 726 aa4.05□□□□□ -1.76
VPS36YLR417W SDT1P53078 280 aa4.05□□□□□ -1.76
VPS36YLR417W RNH201P53942 307 aa4.05□□□□□ -1.76
VPS36YLR417W PAL1Q05518 499 aaKnown RBP4.05□□□□□ -1.76
VPS36YLR417W RPL21BQ12672 160 aaKnown RBP4.05□□□□□ -1.76
VPS36YLR417W NCB2Q92317 146 aa4.05□□□□□ -1.76
VPS36YLR417W SEC14P24280 304 aaKnown RBP4.04□□□□□ -1.76
VPS36YLR417W RAD51P25454 400 aa4.04□□□□□ -1.76
VPS36YLR417W INO2P26798 304 aa4.04□□□□□ -1.76
VPS36YLR417W YEL045CP32616 141 aa4.04□□□□□ -1.76
VPS36YLR417W COY1P34237 679 aa4.04□□□□□ -1.76
VPS36YLR417W RFT1P38206 574 aaPredicted RBP4.04□□□□□ -1.76
VPS36YLR417W SHE3P38272 425 aaKnown RBP4.04□□□□□ -1.76
VPS36YLR417W GDS1P41913 522 aa4.04□□□□□ -1.76
VPS36YLR417W TPC1P53257 314 aa4.04□□□□□ -1.76
VPS36YLR417W LSB1P53281 241 aa4.04□□□□□ -1.76
VPS36YLR417W RPA190P10964 1664 aaKnown RBP4.04□□□□□ -1.76
VPS36YLR417W ILV1P00927 576 aaKnown RBP4.04□□□□□ -1.76
VPS36YLR417W STB1P42845 420 aa4.04□□□□□ -1.76
VPS36YLR417W ILM1P47155 203 aa4.04□□□□□ -1.76
VPS36YLR417W TIM11P81449 96 aaPredicted RBP4.04□□□□□ -1.76
VPS36YLR417W YLR446WQ06204 433 aa4.04□□□□□ -1.76
VPS36YLR417W RRP42Q12277 265 aaPredicted RBP4.04□□□□□ -1.76
VPS36YLR417W SSK22P25390 1331 aaPredicted RBP4.03□□□□□ -1.76
VPS36YLR417W NUP188P52593 1655 aaKnown RBP4.03□□□□□ -1.76
VPS36YLR417W DNF3Q12674 1656 aa4.03□□□□□ -1.76
VPS36YLR417W TDH3P00359 332 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
VPS36YLR417W GPI18P38211 433 aa4.03□□□□□ -1.76
VPS36YLR417W YPC1P38298 316 aa4.03□□□□□ -1.76
VPS36YLR417W NRM1P53718 249 aa4.03□□□□□ -1.76
VPS36YLR417W ADD37Q03233 198 aa4.03□□□□□ -1.76
VPS36YLR417W YDR115WQ04598 105 aa4.03□□□□□ -1.76
VPS36YLR417W YLR173WQ06247 608 aa4.03□□□□□ -1.76
VPS36YLR417W YPL225WQ08971 146 aaKnown RBP4.03□□□□□ -1.76
VPS36YLR417W YPL245WQ12179 454 aaKnown RBP4.03□□□□□ -1.76
VPS36YLR417W PDR18P53756 1333 aa4.03□□□□□ -1.77
VPS36YLR417W COX2P00410 251 aa4.02□□□□□ -1.77
VPS36YLR417W CDC10P25342 322 aaKnown RBP4.02□□□□□ -1.77
VPS36YLR417W EFM1P38732 585 aa4.02□□□□□ -1.77
VPS36YLR417W YAR1P46683 200 aa4.02□□□□□ -1.77
VPS36YLR417W SCW10Q04951 389 aa4.02□□□□□ -1.77
VPS36YLR417W YOR376WQ08900 122 aa4.02□□□□□ -1.77
VPS36YLR417W YOL107WQ12239 342 aa4.02□□□□□ -1.77
VPS36YLR417W YPR064WQ12492 139 aa4.02□□□□□ -1.77
VPS36YLR417W BGL2P15703 313 aaKnown RBP4.01□□□□□ -1.77
VPS36YLR417W IFM1P25038 676 aa4.01□□□□□ -1.77
VPS36YLR417W PET8P38921 284 aa4.01□□□□□ -1.77
VPS36YLR417W PRM9P39551 298 aa4.01□□□□□ -1.77
VPS36YLR417W ALD5P40047 520 aaKnown RBP4.01□□□□□ -1.77
VPS36YLR417W RMI1Q02685 241 aa4.01□□□□□ -1.77
VPS36YLR417W COX20Q04935 205 aa4.01□□□□□ -1.77
VPS36YLR417W ABP140Q08641 628 aaKnown RBP4.01□□□□□ -1.77
VPS36YLR417W POM33Q12164 279 aa4.01□□□□□ -1.77
VPS36YLR417W BI3Q9ZZW7 517 aa4.01□□□□□ -1.77
VPS36YLR417W MSF1P08425 469 aa4.01□□□□□ -1.77
VPS36YLR417W TFS1P14306 219 aa4.01□□□□□ -1.77
VPS36YLR417W POL30P15873 258 aaKnown RBP4.01□□□□□ -1.77
VPS36YLR417W MRPL20P22354 195 aaPredicted RBP4.01□□□□□ -1.77
VPS36YLR417W IMP3P32899 183 aaPredicted RBP4.01□□□□□ -1.77
VPS36YLR417W YKL187CP34231 750 aa4.01□□□□□ -1.77
VPS36YLR417W YIA6P40556 373 aa4.01□□□□□ -1.77
VPS36YLR417W AGX1P43567 385 aa4.01□□□□□ -1.77
VPS36YLR417W TIS11P47977 285 aa4.01□□□□□ -1.77
VPS36YLR417W YGL039WP53183 348 aaKnown RBP4.01□□□□□ -1.77
VPS36YLR417W TLG1Q03322 224 aa4.01□□□□□ -1.77
VPS36YLR417W BTS1Q12051 335 aa4.01□□□□□ -1.77
VPS36YLR417W MED4Q12343 284 aa4.01□□□□□ -1.77
VPS36YLR417W CDC8P00572 216 aa4□□□□□ -1.77
VPS36YLR417W COX4P04037 155 aa4□□□□□ -1.77
VPS36YLR417W PHO13P19881 312 aa4□□□□□ -1.77
VPS36YLR417W IES6P32617 166 aa4□□□□□ -1.77
VPS36YLR417W YJL118WP47022 219 aa4□□□□□ -1.77
VPS36YLR417W LIA1P47120 325 aaKnown RBP4□□□□□ -1.77
VPS36YLR417W YPT32P51996 222 aaKnown RBP4□□□□□ -1.77
VPS36YLR417W SDS23P53172 527 aa4□□□□□ -1.77
VPS36YLR417W CPD1P53314 239 aa4□□□□□ -1.77
VPS36YLR417W MRX11Q03079 207 aa4□□□□□ -1.77
VPS36YLR417W YMR209CQ03648 457 aa4□□□□□ -1.77
VPS36YLR417W SRO7Q12038 1033 aa4□□□□□ -1.77
VPS36YLR417W MET16P18408 261 aaPredicted RBP3.99□□□□□ -1.77
VPS36YLR417W SRB4P32569 687 aa3.99□□□□□ -1.77
VPS36YLR417W YNR066CP53752 436 aa3.99□□□□□ -1.77
VPS36YLR417W VBA1Q04301 562 aa3.99□□□□□ -1.77
VPS36YLR417W RNH1Q04740 348 aa3.99□□□□□ -1.77
VPS36YLR417W CTS2Q06350 511 aa3.99□□□□□ -1.77
VPS36YLR417W MHR1Q06630 226 aa3.99□□□□□ -1.77
VPS36YLR417W MMT2Q08970 484 aa3.99□□□□□ -1.77
VPS36YLR417W TFC7Q12415 435 aa3.99□□□□□ -1.77
VPS36YLR417W FOL3Q12676 427 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms