RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C PRE7P23724 241 aaKnown RBP1.5□□□□□ -2.17
SGD1YLR336C ICL1P28240 557 aaPredicted RBP1.5□□□□□ -2.17
SGD1YLR336C VPH2P32341 215 aa1.5□□□□□ -2.17
SGD1YLR336C ARO4P32449 370 aaKnown RBP1.5□□□□□ -2.17
SGD1YLR336C AIM29P36154 155 aa1.5□□□□□ -2.17
SGD1YLR336C AVT7P40501 490 aa1.5□□□□□ -2.17
SGD1YLR336C YFL064CP43540 174 aa1.5□□□□□ -2.17
SGD1YLR336C CPR7P47103 393 aa1.5□□□□□ -2.17
SGD1YLR336C UFD1P53044 361 aa1.5□□□□□ -2.17
SGD1YLR336C LSB1P53281 241 aa1.5□□□□□ -2.17
SGD1YLR336C PRM7Q12459 698 aa1.5□□□□□ -2.17
SGD1YLR336C PET494P07390 489 aaPredicted RBP1.49□□□□□ -2.17
SGD1YLR336C YSR3P23501 404 aa1.49□□□□□ -2.17
SGD1YLR336C ATG15P25641 520 aa1.49□□□□□ -2.17
SGD1YLR336C IMP1P28627 190 aa1.49□□□□□ -2.17
SGD1YLR336C RIB7P33312 244 aa1.49□□□□□ -2.17
SGD1YLR336C MRPL3P36516 390 aa1.49□□□□□ -2.17
SGD1YLR336C PEX18P38855 283 aa1.49□□□□□ -2.17
SGD1YLR336C SPP2Q02521 185 aa1.49□□□□□ -2.17
SGD1YLR336C ILV1P00927 576 aaKnown RBP1.49□□□□□ -2.17
SGD1YLR336C RPS23AP0CX29 145 aaKnown RBP1.49□□□□□ -2.17
SGD1YLR336C RPS23BP0CX30 145 aa1.49□□□□□ -2.17
SGD1YLR336C AST1P35183 429 aa1.49□□□□□ -2.17
SGD1YLR336C YBL081WP38180 368 aaKnown RBP1.49□□□□□ -2.17
SGD1YLR336C ATG12P38316 186 aa1.49□□□□□ -2.17
SGD1YLR336C SCC4P40090 624 aa1.49□□□□□ -2.17
SGD1YLR336C YIL059CP40520 121 aa1.49□□□□□ -2.17
SGD1YLR336C YIR035CP40579 254 aa1.49□□□□□ -2.17
SGD1YLR336C PRP24P49960 444 aaKnown RBP1.49□□□□□ -2.17
SGD1YLR336C RPN14P53196 417 aa1.49□□□□□ -2.17
SGD1YLR336C ARC18Q05933 178 aaKnown RBP1.49□□□□□ -2.17
SGD1YLR336C RPP0P05317 312 aaKnown RBP1.48□□□□□ -2.17
SGD1YLR336C TDA11P38854 504 aa1.48□□□□□ -2.17
SGD1YLR336C YIA6P40556 373 aa1.48□□□□□ -2.17
SGD1YLR336C IBA57P47158 497 aa1.48□□□□□ -2.17
SGD1YLR336C LIF1P53150 421 aa1.48□□□□□ -2.17
SGD1YLR336C PEX31P53203 462 aa1.48□□□□□ -2.17
SGD1YLR336C CPD1P53314 239 aa1.48□□□□□ -2.17
SGD1YLR336C MRS2Q01926 470 aa1.48□□□□□ -2.17
SGD1YLR336C OSH6Q02201 448 aa1.48□□□□□ -2.17
SGD1YLR336C YML018CQ03730 393 aa1.48□□□□□ -2.17
SGD1YLR336C ARV1Q06541 321 aa1.48□□□□□ -2.17
SGD1YLR336C YLL007CQ07799 665 aa1.48□□□□□ -2.17
SGD1YLR336C SUA5P32579 426 aa1.48□□□□□ -2.17
SGD1YLR336C GCG1P32656 232 aaKnown RBP1.48□□□□□ -2.17
SGD1YLR336C EBP2P36049 427 aaKnown RBP1.48□□□□□ -2.17
SGD1YLR336C MRPL37P36532 105 aa1.48□□□□□ -2.17
SGD1YLR336C SEN34P39707 275 aa1.48□□□□□ -2.17
SGD1YLR336C SYS1P41544 203 aa1.48□□□□□ -2.17
SGD1YLR336C YMR209CQ03648 457 aa1.48□□□□□ -2.17
SGD1YLR336C DXO1Q06349 442 aa1.48□□□□□ -2.17
SGD1YLR336C KRE29P40026 464 aa1.47□□□□□ -2.17
SGD1YLR336C YFR045WP43617 309 aa1.47□□□□□ -2.17
SGD1YLR336C POF1P25576 258 aa1.47□□□□□ -2.17
SGD1YLR336C COT1P32798 439 aa1.47□□□□□ -2.17
SGD1YLR336C SER33P40510 469 aa1.47□□□□□ -2.17
SGD1YLR336C VPS60Q03390 229 aa1.47□□□□□ -2.17
SGD1YLR336C SFH1Q06168 426 aa1.47□□□□□ -2.17
SGD1YLR336C ATG5Q12380 294 aa1.47□□□□□ -2.17
SGD1YLR336C INO80P53115 1489 aa1.47□□□□□ -2.17
SGD1YLR336C MON2P48563 1636 aaPredicted RBP1.46□□□□□ -2.17
SGD1YLR336C RPS3P05750 240 aaKnown RBP1.46□□□□□ -2.17
SGD1YLR336C PHO80P20052 293 aa1.46□□□□□ -2.17
SGD1YLR336C SMC2P38989 1170 aaKnown RBP1.46□□□□□ -2.17
SGD1YLR336C FMP41P53889 259 aaKnown RBP1.46□□□□□ -2.17
SGD1YLR336C TAF9Q05027 157 aa1.46□□□□□ -2.17
SGD1YLR336C YDL144CQ07589 356 aa1.46□□□□□ -2.17
SGD1YLR336C SGT2Q12118 346 aaKnown RBP1.46□□□□□ -2.17
SGD1YLR336C RFM1Q12192 310 aa1.46□□□□□ -2.17
SGD1YLR336C IES3Q12345 250 aa1.46□□□□□ -2.17
SGD1YLR336C CSE1P33307 960 aa1.46□□□□□ -2.18
SGD1YLR336C POP8P38208 133 aa1.46□□□□□ -2.18
SGD1YLR336C YHL044WP38727 235 aa1.46□□□□□ -2.18
SGD1YLR336C RCY1P39531 840 aa1.46□□□□□ -2.18
SGD1YLR336C AVT6P40074 448 aa1.46□□□□□ -2.18
SGD1YLR336C COA1P40452 197 aa1.46□□□□□ -2.18
SGD1YLR336C MRX5P47007 382 aa1.46□□□□□ -2.18
SGD1YLR336C YJL118WP47022 219 aa1.46□□□□□ -2.18
SGD1YLR336C EMC2P47133 292 aaKnown RBP1.46□□□□□ -2.18
SGD1YLR336C SDC1Q03323 175 aa1.46□□□□□ -2.18
SGD1YLR336C CSI1Q04368 295 aa1.46□□□□□ -2.18
SGD1YLR336C YAK1P14680 807 aa1.46□□□□□ -2.18
SGD1YLR336C RPT5P33297 434 aaKnown RBP1.46□□□□□ -2.18
SGD1YLR336C KAP95Q06142 861 aaKnown RBP1.46□□□□□ -2.18
SGD1YLR336C YPR063CQ12160 140 aa1.46□□□□□ -2.18
SGD1YLR336C YPS3Q12303 508 aa1.46□□□□□ -2.18
SGD1YLR336C COX2P00410 251 aa1.45□□□□□ -2.18
SGD1YLR336C POL30P15873 258 aaKnown RBP1.45□□□□□ -2.18
SGD1YLR336C HSM3P38348 480 aa1.45□□□□□ -2.18
SGD1YLR336C ECM14P38836 430 aa1.45□□□□□ -2.18
SGD1YLR336C ECO1P43605 281 aa1.45□□□□□ -2.18
SGD1YLR336C COX20Q04935 205 aa1.45□□□□□ -2.18
SGD1YLR336C GMC2Q06201 188 aa1.45□□□□□ -2.18
SGD1YLR336C SSK22P25390 1331 aaPredicted RBP1.45□□□□□ -2.18
SGD1YLR336C MET16P18408 261 aaPredicted RBP1.45□□□□□ -2.18
SGD1YLR336C NBP35P52920 328 aa1.45□□□□□ -2.18
SGD1YLR336C COG7P53195 279 aa1.45□□□□□ -2.18
SGD1YLR336C SWT21P53873 357 aaPredicted RBP1.45□□□□□ -2.18
SGD1YLR336C SWS2P53937 143 aa1.45□□□□□ -2.18
SGD1YLR336C NNT1Q05874 261 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms