RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W EBP2P36049 427 aaKnown RBP1.54□□□□□ -2.16
SEC22YLR268W MRPL3P36516 390 aa1.54□□□□□ -2.16
SEC22YLR268W MED8P38304 223 aa1.54□□□□□ -2.16
SEC22YLR268W SHQ1P40486 507 aaPredicted RBP1.54□□□□□ -2.16
SEC22YLR268W UFD1P53044 361 aa1.54□□□□□ -2.16
SEC22YLR268W RPN14P53196 417 aa1.54□□□□□ -2.16
SEC22YLR268W YMR209CQ03648 457 aa1.54□□□□□ -2.16
SEC22YLR268W YML018CQ03730 393 aa1.54□□□□□ -2.16
SEC22YLR268W YPL264CQ08980 353 aa1.54□□□□□ -2.16
SEC22YLR268W IES3Q12345 250 aa1.54□□□□□ -2.16
SEC22YLR268W FMP16Q12497 93 aa1.54□□□□□ -2.16
SEC22YLR268W YAL063C-AQ3E791 96 aa1.54□□□□□ -2.16
SEC22YLR268W RPC40P07703 335 aaKnown RBP1.53□□□□□ -2.16
SEC22YLR268W YCR025CP25352 136 aa1.53□□□□□ -2.16
SEC22YLR268W ARO4P32449 370 aaKnown RBP1.53□□□□□ -2.16
SEC22YLR268W RPS0AP32905 252 aaKnown RBP1.53□□□□□ -2.16
SEC22YLR268W SPT4P32914 102 aaPredicted RBP1.53□□□□□ -2.16
SEC22YLR268W YKL070WP36087 169 aa1.53□□□□□ -2.16
SEC22YLR268W AVT6P40074 448 aa1.53□□□□□ -2.16
SEC22YLR268W ECO1P43605 281 aa1.53□□□□□ -2.16
SEC22YLR268W BUD13P46947 266 aaPredicted RBP1.53□□□□□ -2.16
SEC22YLR268W TPN1P53099 579 aa1.53□□□□□ -2.16
SEC22YLR268W MND1P53102 219 aa1.53□□□□□ -2.16
SEC22YLR268W COG7P53195 279 aa1.53□□□□□ -2.16
SEC22YLR268W YPL113CQ02961 396 aa1.53□□□□□ -2.16
SEC22YLR268W YDL144CQ07589 356 aa1.53□□□□□ -2.16
SEC22YLR268W YPR063CQ12160 140 aa1.53□□□□□ -2.16
SEC22YLR268W YOR114WQ12219 294 aa1.53□□□□□ -2.16
SEC22YLR268W YOL163WP0CF20 169 aa1.52□□□□□ -2.17
SEC22YLR268W RPS23AP0CX29 145 aaKnown RBP1.52□□□□□ -2.17
SEC22YLR268W RPS23BP0CX30 145 aa1.52□□□□□ -2.17
SEC22YLR268W YAK1P14680 807 aa1.52□□□□□ -2.17
SEC22YLR268W PHO80P20052 293 aa1.52□□□□□ -2.17
SEC22YLR268W VPS1P21576 704 aaKnown RBP1.52□□□□□ -2.17
SEC22YLR268W YSR3P23501 404 aa1.52□□□□□ -2.17
SEC22YLR268W PRE7P23724 241 aaKnown RBP1.52□□□□□ -2.17
SEC22YLR268W MBA1P38300 278 aa1.52□□□□□ -2.17
SEC22YLR268W YHL044WP38727 235 aa1.52□□□□□ -2.17
SEC22YLR268W ECM14P38836 430 aa1.52□□□□□ -2.17
SEC22YLR268W SEN34P39707 275 aa1.52□□□□□ -2.17
SEC22YLR268W SPO73P40031 143 aa1.52□□□□□ -2.17
SEC22YLR268W AVT7P40501 490 aa1.52□□□□□ -2.17
SEC22YLR268W YFR045WP43617 309 aa1.52□□□□□ -2.17
SEC22YLR268W MRX5P47007 382 aa1.52□□□□□ -2.17
SEC22YLR268W GPI8P49018 411 aa1.52□□□□□ -2.17
SEC22YLR268W MRS2Q01926 470 aa1.52□□□□□ -2.17
SEC22YLR268W VPS60Q03390 229 aa1.52□□□□□ -2.17
SEC22YLR268W YDR114CQ04597 100 aa1.52□□□□□ -2.17
SEC22YLR268W GTO3Q04806 366 aa1.52□□□□□ -2.17
SEC22YLR268W NNT1Q05874 261 aa1.52□□□□□ -2.17
SEC22YLR268W SSK22P25390 1331 aaPredicted RBP1.51□□□□□ -2.17
SEC22YLR268W SSA3P09435 649 aaKnown RBP1.51□□□□□ -2.17
SEC22YLR268W DAL5P15365 543 aa1.51□□□□□ -2.17
SEC22YLR268W OSM1P21375 501 aaKnown RBP1.51□□□□□ -2.17
SEC22YLR268W SYS1P41544 203 aa1.51□□□□□ -2.17
SEC22YLR268W FMP33P46998 180 aa1.51□□□□□ -2.17
SEC22YLR268W EMC2P47133 292 aaKnown RBP1.51□□□□□ -2.17
SEC22YLR268W RSM27P53305 110 aa1.51□□□□□ -2.17
SEC22YLR268W CPD1P53314 239 aa1.51□□□□□ -2.17
SEC22YLR268W OSH6Q02201 448 aa1.51□□□□□ -2.17
SEC22YLR268W SPP2Q02521 185 aa1.51□□□□□ -2.17
SEC22YLR268W VBA1Q04301 562 aa1.51□□□□□ -2.17
SEC22YLR268W TAF9Q05027 157 aa1.51□□□□□ -2.17
SEC22YLR268W DXO1Q06349 442 aa1.51□□□□□ -2.17
SEC22YLR268W YMR316C-AI2HB70 103 aa1.5□□□□□ -2.17
SEC22YLR268W TDH1P00360 332 aaKnown RBP1.5□□□□□ -2.17
SEC22YLR268W PET494P07390 489 aaPredicted RBP1.5□□□□□ -2.17
SEC22YLR268W ATG15P25641 520 aa1.5□□□□□ -2.17
SEC22YLR268W PEX3P28795 441 aa1.5□□□□□ -2.17
SEC22YLR268W ERG2P32352 222 aa1.5□□□□□ -2.17
SEC22YLR268W KRE6P32486 720 aa1.5□□□□□ -2.17
SEC22YLR268W CAT2P32796 670 aaKnown RBP1.5□□□□□ -2.17
SEC22YLR268W COT1P32798 439 aa1.5□□□□□ -2.17
SEC22YLR268W TKL2P33315 681 aa1.5□□□□□ -2.17
SEC22YLR268W PHO89P38361 574 aa1.5□□□□□ -2.17
SEC22YLR268W SMC2P38989 1170 aaKnown RBP1.5□□□□□ -2.17
SEC22YLR268W RTT105P40063 208 aa1.5□□□□□ -2.17
SEC22YLR268W RPE1P46969 238 aa1.5□□□□□ -2.17
SEC22YLR268W YJL144WP47009 104 aa1.5□□□□□ -2.17
SEC22YLR268W IBA57P47158 497 aa1.5□□□□□ -2.17
SEC22YLR268W HSH155P49955 971 aaKnown RBP1.5□□□□□ -2.17
SEC22YLR268W PEX31P53203 462 aa1.5□□□□□ -2.17
SEC22YLR268W LSB1P53281 241 aa1.5□□□□□ -2.17
SEC22YLR268W SWT21P53873 357 aaPredicted RBP1.5□□□□□ -2.17
SEC22YLR268W YLL007CQ07799 665 aa1.5□□□□□ -2.17
SEC22YLR268W RLP24Q07915 199 aaKnown RBP1.5□□□□□ -2.17
SEC22YLR268W YAL064W-BO13512 126 aa1.49□□□□□ -2.17
SEC22YLR268W RPS3P05750 240 aaKnown RBP1.49□□□□□ -2.17
SEC22YLR268W OM45P16547 393 aa1.49□□□□□ -2.17
SEC22YLR268W CAM1P29547 415 aaKnown RBP1.49□□□□□ -2.17
SEC22YLR268W PPQ1P32945 549 aa1.49□□□□□ -2.17
SEC22YLR268W YBL081WP38180 368 aaKnown RBP1.49□□□□□ -2.17
SEC22YLR268W POP8P38208 133 aa1.49□□□□□ -2.17
SEC22YLR268W RCY1P39531 840 aa1.49□□□□□ -2.17
SEC22YLR268W TRM44Q02648 567 aaKnown RBP1.49□□□□□ -2.17
SEC22YLR268W SFH1Q06168 426 aa1.49□□□□□ -2.17
SEC22YLR268W GMC2Q06201 188 aa1.49□□□□□ -2.17
SEC22YLR268W SEC10Q06245 871 aa1.49□□□□□ -2.17
SEC22YLR268W HRT1Q08273 121 aa1.49□□□□□ -2.17
SEC22YLR268W PER33Q12144 273 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms