RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	YCL002C	P25565	263 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CBF5	YLR175W	CHK1	P38147	527 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	SHE1	P38200	338 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CBF5	YLR175W	NVJ1	P38881	321 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	JLP2	P40206	208 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	ECO1	P43605	281 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	YAE1	P47118	141 aa	Predicted RBP	4.08	□□□□□ -1.76
CBF5	YLR175W	VPS73	P53142	486 aa	Known RBP	4.08	□□□□□ -1.76
CBF5	YLR175W	RRN9	P53437	365 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	PDR16	P53860	351 aa	Known RBP	4.08	□□□□□ -1.76
CBF5	YLR175W	YPL039W	Q03080	316 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	RSM24	Q03976	319 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	COX20	Q04935	205 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	MRPL51	Q06090	140 aa	Predicted RBP	4.08	□□□□□ -1.76
CBF5	YLR175W	YPR147C	Q06522	304 aa	Known RBP	4.08	□□□□□ -1.76
CBF5	YLR175W	IPK1	Q06667	281 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	MCM21	Q06675	368 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	YDL114W	Q07530	308 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	BTS1	Q12051	335 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	MDM32	Q12171	622 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	SWM1	Q12379	170 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	TMA7	Q3E764	64 aa	Known RBP	4.08	□□□□□ -1.76
CBF5	YLR175W	MTR10	Q99189	972 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	GCD1	P09032	578 aa	Predicted RBP	4.07	□□□□□ -1.76
CBF5	YLR175W	PRE7	P23724	241 aa	Known RBP	4.07	□□□□□ -1.76
CBF5	YLR175W	CLB2	P24869	491 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	GIT1	P25346	518 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
CBF5	YLR175W	DTR1	P38125	572 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	REE1	P40893	198 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	SFH5	P47008	294 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	GPG1	P53130	126 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	PBP1	P53297	722 aa	Known RBP	4.07	□□□□□ -1.76
CBF5	YLR175W	MKC7	P53379	596 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	ATG4	P53867	494 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	MAK3	Q03503	176 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	GIS1	Q03833	894 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	VBA4	Q04602	768 aa	Known RBP	4.07	□□□□□ -1.76
CBF5	YLR175W	TAZ1	Q06510	381 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	NIP7	Q08962	181 aa	Known RBP	4.07	□□□□□ -1.76
CBF5	YLR175W	YOL114C	Q12322	202 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	FRE6	Q12473	712 aa		4.07	□□□□□ -1.76
CBF5	YLR175W	CYC7	P00045	113 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	QCR7	P00128	127 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	YFR010W-A	P0C5N0	62 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	PDX1	P16451	410 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	UTR1	P21373	530 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	GAS1	P22146	559 aa	Known RBP	4.06	□□□□□ -1.76
CBF5	YLR175W	AHC2	P25649	128 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	ATS1	P31386	333 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	YBR063C	P38083	404 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	THI2	P38141	450 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	GPX2	P38143	162 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	MOH1	P38191	138 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	PHO90	P39535	881 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	YJL218W	P40892	196 aa	Known RBP	4.06	□□□□□ -1.76
CBF5	YLR175W	GDS1	P41913	522 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	YJR120W	P47157	116 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	BPL1	P48445	690 aa	Predicted RBP	4.06	□□□□□ -1.76
CBF5	YLR175W	YGR126W	P53274	230 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	PAU12	P53343	120 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	NUP116	Q02630	1113 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	SDC1	Q03323	175 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	RSM28	Q03430	361 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	HRT1	Q08273	121 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	RDL2	Q08742	149 aa	Known RBP	4.06	□□□□□ -1.76
CBF5	YLR175W	FRE5	Q08908	694 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	MSH5	Q12175	901 aa		4.06	□□□□□ -1.76
CBF5	YLR175W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
CBF5	YLR175W	PRP8	P33334	2413 aa	Known RBP	4.06	□□□□□ -1.76
CBF5	YLR175W	YAL064W-B	O13512	126 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	COX9	P07255	59 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	RPL24B	P24000	155 aa	Known RBP	4.05	□□□□□ -1.76
CBF5	YLR175W	STE50	P25344	346 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	ADH7	P25377	361 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	CAM1	P29547	415 aa	Known RBP	4.05	□□□□□ -1.76
CBF5	YLR175W	ARO7	P32178	256 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	DOA4	P32571	926 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	VPS17	P32913	551 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	SDS22	P36047	338 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	PAU24	P38155	120 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	SHO1	P40073	367 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	RFC4	P40339	323 aa	Known RBP	4.05	□□□□□ -1.76
CBF5	YLR175W	SDP1	P40479	209 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	PMT6	P42934	759 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	MNN5	P46982	586 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	CCC1	P47818	322 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	RAI1	P53063	387 aa	Known RBP	4.05	□□□□□ -1.76
CBF5	YLR175W	CPR8	P53728	308 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	FDC1	Q03034	503 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	LRS4	Q04087	347 aa	Known RBP	4.05	□□□□□ -1.76
CBF5	YLR175W	MIX14	Q04341	121 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	MGR3	Q04472	501 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	ATG33	Q06485	197 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	RRP9	Q06506	573 aa	Known RBP	4.05	□□□□□ -1.76
CBF5	YLR175W	AIM6	Q07716	390 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	MIM1	Q08176	113 aa		4.05	□□□□□ -1.76
CBF5	YLR175W	RKM1	Q08961	583 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 159.5 ms