RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W SNX4P47057 423 aa2.89□□□□□ -1.95
SWD2YKL018W SED5Q01590 340 aa2.89□□□□□ -1.95
SWD2YKL018W COX20Q04935 205 aa2.89□□□□□ -1.95
SWD2YKL018W DCR2Q05924 578 aa2.89□□□□□ -1.95
SWD2YKL018W FDH1Q08911 376 aa2.89□□□□□ -1.95
SWD2YKL018W GRE1Q08969 168 aa2.89□□□□□ -1.95
SWD2YKL018W BTS1Q12051 335 aa2.89□□□□□ -1.95
SWD2YKL018W ATP16Q12165 160 aa2.89□□□□□ -1.95
SWD2YKL018W WTM1Q12363 437 aaKnown RBP2.89□□□□□ -1.95
SWD2YKL018W RPN6Q12377 434 aa2.89□□□□□ -1.95
SWD2YKL018W PAN1P32521 1480 aa2.89□□□□□ -1.95
SWD2YKL018W TDH2P00358 332 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W TDH3P00359 332 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SWD2YKL018W REP1P03871 373 aa2.88□□□□□ -1.95
SWD2YKL018W SPS100P13130 326 aa2.88□□□□□ -1.95
SWD2YKL018W ERD1P16151 362 aa2.88□□□□□ -1.95
SWD2YKL018W ZRC1P20107 442 aa2.88□□□□□ -1.95
SWD2YKL018W GIT1P25346 518 aa2.88□□□□□ -1.95
SWD2YKL018W RPL16BP26785 198 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W CWP1P28319 239 aa2.88□□□□□ -1.95
SWD2YKL018W MEI4P29467 408 aa2.88□□□□□ -1.95
SWD2YKL018W PMT2P31382 759 aa2.88□□□□□ -1.95
SWD2YKL018W NUP2P32499 720 aa2.88□□□□□ -1.95
SWD2YKL018W KTI12P34253 313 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W ANR2P36090 516 aaPredicted RBP2.88□□□□□ -1.95
SWD2YKL018W WSC4P38739 605 aa2.88□□□□□ -1.95
SWD2YKL018W PEX22P39718 180 aa2.88□□□□□ -1.95
SWD2YKL018W SEC72P39742 193 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W HEM14P40012 539 aa2.88□□□□□ -1.95
SWD2YKL018W YER186CP40101 306 aa2.88□□□□□ -1.95
SWD2YKL018W YIA6P40556 373 aa2.88□□□□□ -1.95
SWD2YKL018W ERG10P41338 398 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W AGP3P43548 558 aa2.88□□□□□ -1.95
SWD2YKL018W HIT1P46973 164 aa2.88□□□□□ -1.95
SWD2YKL018W FMP33P46998 180 aa2.88□□□□□ -1.95
SWD2YKL018W LSM1P47017 172 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W VMA10P48836 114 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W NOP13P53883 403 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SWD2YKL018W SUR7P54003 302 aa2.88□□□□□ -1.95
SWD2YKL018W MRS2Q01926 470 aa2.88□□□□□ -1.95
SWD2YKL018W SKI8Q02793 397 aaPredicted RBP2.88□□□□□ -1.95
SWD2YKL018W PRM15Q03262 622 aa2.88□□□□□ -1.95
SWD2YKL018W MYO5Q04439 1219 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W LIP2Q06005 328 aa2.88□□□□□ -1.95
SWD2YKL018W RDL2Q08742 149 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W SFM1Q12314 213 aa2.88□□□□□ -1.95
SWD2YKL018W UTP23Q12339 254 aaKnown RBP2.88□□□□□ -1.95
SWD2YKL018W ATG31Q12421 196 aa2.88□□□□□ -1.95
SWD2YKL018W YPK9Q12697 1472 aa2.88□□□□□ -1.95
SWD2YKL018W RKR1Q04781 1562 aa2.87□□□□□ -1.95
SWD2YKL018W RHO1P06780 209 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W CDC33P07260 213 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W RPL27AP0C2H6 136 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W RPL27BP0C2H7 136 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W FRS2P15625 503 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W SNF6P18888 332 aa2.87□□□□□ -1.95
SWD2YKL018W VPS1P21576 704 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W PBN1P25580 416 aa2.87□□□□□ -1.95
SWD2YKL018W PPA2P28239 310 aa2.87□□□□□ -1.95
SWD2YKL018W URA10P30402 227 aa2.87□□□□□ -1.95
SWD2YKL018W AST1P35183 429 aa2.87□□□□□ -1.95
SWD2YKL018W AIM29P36154 155 aa2.87□□□□□ -1.95
SWD2YKL018W VMA22P38784 181 aa2.87□□□□□ -1.95
SWD2YKL018W PFS1P38872 237 aa2.87□□□□□ -1.95
SWD2YKL018W GIM4P40005 111 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W ICE2P40499 491 aa2.87□□□□□ -1.95
SWD2YKL018W YIL001WP40560 513 aa2.87□□□□□ -1.95
SWD2YKL018W PHB1P40961 287 aa2.87□□□□□ -1.95
SWD2YKL018W GAB1P41733 394 aa2.87□□□□□ -1.95
SWD2YKL018W YFL040WP43562 540 aa2.87□□□□□ -1.95
SWD2YKL018W PMT4P46971 762 aa2.87□□□□□ -1.95
SWD2YKL018W YJL118WP47022 219 aa2.87□□□□□ -1.95
SWD2YKL018W YGL159WP53110 370 aa2.87□□□□□ -1.95
SWD2YKL018W SWC4P53201 476 aa2.87□□□□□ -1.95
SWD2YKL018W PRP38Q00723 242 aaPredicted RBP2.87□□□□□ -1.95
SWD2YKL018W SNX41Q04053 625 aa2.87□□□□□ -1.95
SWD2YKL018W YET2Q04210 160 aa2.87□□□□□ -1.95
SWD2YKL018W SPC24Q04477 213 aa2.87□□□□□ -1.95
SWD2YKL018W YMR226CQ05016 267 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W CDD1Q06549 142 aa2.87□□□□□ -1.95
SWD2YKL018W ASR1Q06834 288 aa2.87□□□□□ -1.95
SWD2YKL018W YLR012CQ07927 99 aa2.87□□□□□ -1.95
SWD2YKL018W SDO1Q07953 250 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W YRA1Q12159 226 aaKnown RBP2.87□□□□□ -1.95
SWD2YKL018W POM33Q12164 279 aa2.87□□□□□ -1.95
SWD2YKL018W MSH5Q12175 901 aa2.87□□□□□ -1.95
SWD2YKL018W SOD1P00445 154 aaKnown RBP2.86□□□□□ -1.95
SWD2YKL018W ILV1P00927 576 aaKnown RBP2.86□□□□□ -1.95
SWD2YKL018W STE7P06784 515 aa2.86□□□□□ -1.95
SWD2YKL018W RPS24AP0CX31 135 aaKnown RBP2.86□□□□□ -1.95
SWD2YKL018W RPS24BP0CX32 135 aaKnown RBP2.86□□□□□ -1.95
SWD2YKL018W FBA1P14540 359 aaKnown RBP2.86□□□□□ -1.95
SWD2YKL018W POL30P15873 258 aaKnown RBP2.86□□□□□ -1.95
SWD2YKL018W CBF1P17106 351 aa2.86□□□□□ -1.95
SWD2YKL018W INO2P26798 304 aa2.86□□□□□ -1.95
SWD2YKL018W PEX3P28795 441 aa2.86□□□□□ -1.95
SWD2YKL018W GCG1P32656 232 aaKnown RBP2.86□□□□□ -1.95
SWD2YKL018W SOL2P37262 315 aa2.86□□□□□ -1.95
SWD2YKL018W RFT1P38206 574 aaPredicted RBP2.86□□□□□ -1.95
SWD2YKL018W BMT2P38278 337 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms