RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W PPQ1P32945 549 aa2.19□□□□□ -2.06
CAP1YKL007W EDC2P40023 145 aaPredicted RBP2.19□□□□□ -2.06
CAP1YKL007W YNR066CP53752 436 aa2.19□□□□□ -2.06
CAP1YKL007W GTO3Q04806 366 aa2.19□□□□□ -2.06
CAP1YKL007W MIM1Q08176 113 aa2.19□□□□□ -2.06
CAP1YKL007W REX3Q12090 404 aa2.19□□□□□ -2.06
CAP1YKL007W TRM3Q07527 1436 aa2.18□□□□□ -2.06
CAP1YKL007W SPS100P13130 326 aa2.18□□□□□ -2.06
CAP1YKL007W SMC2P38989 1170 aaKnown RBP2.18□□□□□ -2.06
CAP1YKL007W NAS2P40555 220 aa2.18□□□□□ -2.06
CAP1YKL007W ECO1P43605 281 aa2.18□□□□□ -2.06
CAP1YKL007W YDR222WQ04925 415 aa2.18□□□□□ -2.06
CAP1YKL007W RTC5Q12108 567 aaKnown RBP2.18□□□□□ -2.06
CAP1YKL007W DRS2P39524 1355 aa2.18□□□□□ -2.06
CAP1YKL007W DAL81P21657 970 aa2.17□□□□□ -2.06
CAP1YKL007W MIG1P27705 504 aa2.17□□□□□ -2.06
CAP1YKL007W SUR1P33300 382 aa2.17□□□□□ -2.06
CAP1YKL007W EBP2P36049 427 aaKnown RBP2.17□□□□□ -2.06
CAP1YKL007W YKR032WP36127 104 aa2.17□□□□□ -2.06
CAP1YKL007W AIM29P36154 155 aa2.17□□□□□ -2.06
CAP1YKL007W YHR035WP38769 630 aa2.17□□□□□ -2.06
CAP1YKL007W YNL040WP53960 456 aaPredicted RBP2.17□□□□□ -2.06
CAP1YKL007W ACT1P60010 375 aaKnown RBP2.17□□□□□ -2.06
CAP1YKL007W IRC4Q03036 179 aa2.17□□□□□ -2.06
CAP1YKL007W DXO1Q06349 442 aa2.17□□□□□ -2.06
CAP1YKL007W PML1Q07930 204 aaPredicted RBP2.17□□□□□ -2.06
CAP1YKL007W MET2P08465 486 aa2.16□□□□□ -2.06
CAP1YKL007W IFM1P25038 676 aa2.16□□□□□ -2.06
CAP1YKL007W RSA4P25382 515 aaKnown RBP2.16□□□□□ -2.06
CAP1YKL007W MRPL6P32904 214 aa2.16□□□□□ -2.06
CAP1YKL007W CAB3P36076 571 aa2.16□□□□□ -2.06
CAP1YKL007W RRF1P38771 230 aa2.16□□□□□ -2.06
CAP1YKL007W LIN1P38852 340 aaPredicted RBP2.16□□□□□ -2.06
CAP1YKL007W YGR168CP53293 376 aa2.16□□□□□ -2.06
CAP1YKL007W ARP5P53946 755 aa2.16□□□□□ -2.06
CAP1YKL007W ARC18Q05933 178 aaKnown RBP2.16□□□□□ -2.06
CAP1YKL007W MRX4Q12467 430 aa2.16□□□□□ -2.06
CAP1YKL007W TY1B-NL2Q99337 1749 aaKnown RBP2.16□□□□□ -2.06
CAP1YKL007W BCK1Q01389 1478 aa2.15□□□□□ -2.06
CAP1YKL007W PET18P25362 215 aa2.15□□□□□ -2.07
CAP1YKL007W PET8P38921 284 aa2.15□□□□□ -2.07
CAP1YKL007W YDR089WP38966 869 aa2.15□□□□□ -2.07
CAP1YKL007W SOP4P39543 234 aaPredicted RBP2.15□□□□□ -2.07
CAP1YKL007W UTP25P40498 721 aaKnown RBP2.15□□□□□ -2.07
CAP1YKL007W LIF1P53150 421 aa2.15□□□□□ -2.07
CAP1YKL007W YPL080CQ02826 108 aa2.15□□□□□ -2.07
CAP1YKL007W YOR292CQ08743 309 aa2.15□□□□□ -2.07
CAP1YKL007W UTP23Q12339 254 aaKnown RBP2.15□□□□□ -2.07
CAP1YKL007W YIL002W-AQ3E7Z5 69 aa2.15□□□□□ -2.07
CAP1YKL007W DNF3Q12674 1656 aa2.15□□□□□ -2.07
CAP1YKL007W MLP1Q02455 1875 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W CFT1Q06632 1357 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W YIL177CP40434 1758 aa2.14□□□□□ -2.07
CAP1YKL007W YJL225CP40889 1758 aa2.14□□□□□ -2.07
CAP1YKL007W CDC37P06101 506 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W YOL163WP0CF20 169 aa2.14□□□□□ -2.07
CAP1YKL007W RPL18AP0CX49 186 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W RPL18BP0CX50 186 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W GCD2P12754 651 aaPredicted RBP2.14□□□□□ -2.07
CAP1YKL007W VPS1P21576 704 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W DAL80P26343 269 aa2.14□□□□□ -2.07
CAP1YKL007W GCG1P32656 232 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W YAP3P38749 330 aa2.14□□□□□ -2.07
CAP1YKL007W SSO2P39926 295 aa2.14□□□□□ -2.07
CAP1YKL007W INA22P40576 216 aa2.14□□□□□ -2.07
CAP1YKL007W GPI8P49018 411 aa2.14□□□□□ -2.07
CAP1YKL007W PRO2P54885 456 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W SNX41Q04053 625 aa2.14□□□□□ -2.07
CAP1YKL007W SEC13Q04491 297 aaKnown RBP2.14□□□□□ -2.07
CAP1YKL007W MDY2Q12285 212 aa2.14□□□□□ -2.07
CAP1YKL007W LAG2Q92325 660 aa2.14□□□□□ -2.07
CAP1YKL007W HAP1P0CE41 1502 aa2.13□□□□□ -2.07
CAP1YKL007W TDH3P00359 332 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
CAP1YKL007W GAL3P13045 520 aa2.13□□□□□ -2.07
CAP1YKL007W YAK1P14680 807 aa2.13□□□□□ -2.07
CAP1YKL007W ZRT1P32804 376 aa2.13□□□□□ -2.07
CAP1YKL007W PCL7P40186 285 aa2.13□□□□□ -2.07
CAP1YKL007W OSW5P40219 148 aa2.13□□□□□ -2.07
CAP1YKL007W YFL064CP43540 174 aa2.13□□□□□ -2.07
CAP1YKL007W YFL040WP43562 540 aa2.13□□□□□ -2.07
CAP1YKL007W UFD1P53044 361 aa2.13□□□□□ -2.07
CAP1YKL007W VPS20Q04272 221 aa2.13□□□□□ -2.07
CAP1YKL007W PEX30Q06169 523 aa2.13□□□□□ -2.07
CAP1YKL007W PFK27Q12471 397 aaPredicted RBP2.13□□□□□ -2.07
CAP1YKL007W DCP1Q12517 231 aaPredicted RBP2.13□□□□□ -2.07
CAP1YKL007W SNF2P22082 1703 aa2.13□□□□□ -2.07
CAP1YKL007W RAD9P14737 1309 aa2.13□□□□□ -2.07
CAP1YKL007W TDH2P00358 332 aaKnown RBP2.12□□□□□ -2.07
CAP1YKL007W MCH2P36032 473 aa2.12□□□□□ -2.07
CAP1YKL007W YHL044WP38727 235 aa2.12□□□□□ -2.07
CAP1YKL007W RSM27P53305 110 aa2.12□□□□□ -2.07
CAP1YKL007W YLR446WQ06204 433 aa2.12□□□□□ -2.07
CAP1YKL007W SAM4Q08985 325 aaKnown RBP2.12□□□□□ -2.07
CAP1YKL007W MNN9P39107 395 aaKnown RBP2.11□□□□□ -2.07
CAP1YKL007W LOC1P43586 204 aaPredicted RBP2.11□□□□□ -2.07
CAP1YKL007W OKP1P53298 406 aa2.11□□□□□ -2.07
CAP1YKL007W EGD1Q02642 157 aaKnown RBP2.11□□□□□ -2.07
CAP1YKL007W YLR297WQ05899 129 aa2.11□□□□□ -2.07
CAP1YKL007W CLP1Q08685 445 aaPredicted RBP2.11□□□□□ -2.07
CAP1YKL007W IZH4Q99393 312 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms