RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A RPP0P05317 312 aaKnown RBP2.38□□□□□ -2.03
SFT1YKL006C-A STE7P06784 515 aa2.38□□□□□ -2.03
SFT1YKL006C-A CDC33P07260 213 aaKnown RBP2.38□□□□□ -2.03
SFT1YKL006C-A RPS18AP0CX55 146 aaKnown RBP2.38□□□□□ -2.03
SFT1YKL006C-A RPS18BP0CX56 146 aaPredicted RBP2.38□□□□□ -2.03
SFT1YKL006C-A NHP6BP11633 99 aaKnown RBP2.38□□□□□ -2.03
SFT1YKL006C-A COQ1P18900 473 aa2.38□□□□□ -2.03
SFT1YKL006C-A PPA2P28239 310 aa2.38□□□□□ -2.03
SFT1YKL006C-A CSE1P33307 960 aa2.38□□□□□ -2.03
SFT1YKL006C-A MRPL27P36526 146 aaPredicted RBP2.38□□□□□ -2.03
SFT1YKL006C-A MRX3P38172 270 aa2.38□□□□□ -2.03
SFT1YKL006C-A RTC3P38804 111 aaPredicted RBP2.38□□□□□ -2.03
SFT1YKL006C-A TAD2P47058 250 aa2.38□□□□□ -2.03
SFT1YKL006C-A HAM1P47119 197 aaKnown RBP2.38□□□□□ -2.03
SFT1YKL006C-A HOC1P47124 396 aa2.38□□□□□ -2.03
SFT1YKL006C-A RPL21AQ02753 160 aaKnown RBP2.38□□□□□ -2.03
SFT1YKL006C-A SNZ1Q03148 297 aa2.38□□□□□ -2.03
SFT1YKL006C-A YMR010WQ03687 405 aa2.38□□□□□ -2.03
SFT1YKL006C-A KRE28Q04431 385 aa2.38□□□□□ -2.03
SFT1YKL006C-A SPO77Q06134 477 aa2.38□□□□□ -2.03
SFT1YKL006C-A TAZ1Q06510 381 aa2.38□□□□□ -2.03
SFT1YKL006C-A SNF8Q12483 233 aa2.38□□□□□ -2.03
SFT1YKL006C-A YPR064WQ12492 139 aa2.38□□□□□ -2.03
SFT1YKL006C-A RPL21BQ12672 160 aaKnown RBP2.38□□□□□ -2.03
SFT1YKL006C-A TFS1P14306 219 aa2.37□□□□□ -2.03
SFT1YKL006C-A CTA1P15202 515 aa2.37□□□□□ -2.03
SFT1YKL006C-A ERD1P16151 362 aa2.37□□□□□ -2.03
SFT1YKL006C-A FUS3P16892 353 aaKnown RBP2.37□□□□□ -2.03
SFT1YKL006C-A YPK2P18961 677 aa2.37□□□□□ -2.03
SFT1YKL006C-A CMK2P22517 447 aa2.37□□□□□ -2.03
SFT1YKL006C-A RPL24BP24000 155 aaKnown RBP2.37□□□□□ -2.03
SFT1YKL006C-A GIT1P25346 518 aa2.37□□□□□ -2.03
SFT1YKL006C-A SPT4P32914 102 aaPredicted RBP2.37□□□□□ -2.03
SFT1YKL006C-A YKL187CP34231 750 aa2.37□□□□□ -2.03
SFT1YKL006C-A SOL2P37262 315 aa2.37□□□□□ -2.03
SFT1YKL006C-A ATG12P38316 186 aa2.37□□□□□ -2.03
SFT1YKL006C-A CHL4P38907 458 aa2.37□□□□□ -2.03
SFT1YKL006C-A PEX22P39718 180 aa2.37□□□□□ -2.03
SFT1YKL006C-A MOB2P43563 287 aa2.37□□□□□ -2.03
SFT1YKL006C-A JHD2P47156 728 aaPredicted RBP2.37□□□□□ -2.03
SFT1YKL006C-A TPC1P53257 314 aa2.37□□□□□ -2.03
SFT1YKL006C-A SEC13Q04491 297 aaKnown RBP2.37□□□□□ -2.03
SFT1YKL006C-A DCR2Q05924 578 aa2.37□□□□□ -2.03
SFT1YKL006C-A SMD2Q06217 110 aaKnown RBP2.37□□□□□ -2.03
SFT1YKL006C-A MRX9Q07349 420 aaKnown RBP2.37□□□□□ -2.03
SFT1YKL006C-A CSM4Q08955 156 aa2.37□□□□□ -2.03
SFT1YKL006C-A GET4Q12125 312 aa2.37□□□□□ -2.03
SFT1YKL006C-A ATP16Q12165 160 aa2.37□□□□□ -2.03
SFT1YKL006C-A RRP42Q12277 265 aaPredicted RBP2.37□□□□□ -2.03
SFT1YKL006C-A MCT1Q12283 360 aa2.37□□□□□ -2.03
SFT1YKL006C-A HMS1Q12398 434 aa2.37□□□□□ -2.03
SFT1YKL006C-A PRM4Q12498 284 aa2.37□□□□□ -2.03
SFT1YKL006C-A SEY1Q99287 776 aa2.37□□□□□ -2.03
SFT1YKL006C-A THP2O13539 261 aaKnown RBP2.36□□□□□ -2.03
SFT1YKL006C-A APA2P22108 325 aa2.36□□□□□ -2.03
SFT1YKL006C-A RNA15P25299 296 aaPredicted RBP2.36□□□□□ -2.03
SFT1YKL006C-A INO2P26798 304 aa2.36□□□□□ -2.03
SFT1YKL006C-A VMA6P32366 345 aaKnown RBP2.36□□□□□ -2.03
SFT1YKL006C-A KTI12P34253 313 aaKnown RBP2.36□□□□□ -2.03
SFT1YKL006C-A CAB3P36076 571 aa2.36□□□□□ -2.03
SFT1YKL006C-A RIB1P38066 345 aa2.36□□□□□ -2.03
SFT1YKL006C-A MIC12P38341 106 aa2.36□□□□□ -2.03
SFT1YKL006C-A RCK1P38622 512 aa2.36□□□□□ -2.03
SFT1YKL006C-A PET8P38921 284 aa2.36□□□□□ -2.03
SFT1YKL006C-A YRB2P40517 327 aa2.36□□□□□ -2.03
SFT1YKL006C-A ASG7P46993 209 aa2.36□□□□□ -2.03
SFT1YKL006C-A GLG2P47011 380 aa2.36□□□□□ -2.03
SFT1YKL006C-A AIM23P47015 356 aa2.36□□□□□ -2.03
SFT1YKL006C-A RPC17P47076 161 aa2.36□□□□□ -2.03
SFT1YKL006C-A YPT32P51996 222 aaKnown RBP2.36□□□□□ -2.03
SFT1YKL006C-A VAC7P53950 1165 aa2.36□□□□□ -2.03
SFT1YKL006C-A TRM44Q02648 567 aaKnown RBP2.36□□□□□ -2.03
SFT1YKL006C-A SCS7Q03529 384 aa2.36□□□□□ -2.03
SFT1YKL006C-A FAR10Q06001 478 aa2.36□□□□□ -2.03
SFT1YKL006C-A SFH1Q06168 426 aa2.36□□□□□ -2.03
SFT1YKL006C-A YLR446WQ06204 433 aa2.36□□□□□ -2.03
SFT1YKL006C-A CTR3Q06686 241 aa2.36□□□□□ -2.03
SFT1YKL006C-A YOR114WQ12219 294 aa2.36□□□□□ -2.03
SFT1YKL006C-A YPS3Q12303 508 aa2.36□□□□□ -2.03
SFT1YKL006C-A RAX2Q12465 1220 aa2.36□□□□□ -2.03
SFT1YKL006C-A YKL183C-AQ3E765 70 aa2.36□□□□□ -2.03
SFT1YKL006C-A RPS3P05750 240 aaKnown RBP2.35□□□□□ -2.03
SFT1YKL006C-A ASP3-2P0CX77 362 aa2.35□□□□□ -2.03
SFT1YKL006C-A ASP3-3P0CX78 362 aa2.35□□□□□ -2.03
SFT1YKL006C-A ASP3-4P0CX79 362 aa2.35□□□□□ -2.03
SFT1YKL006C-A ASP3-1P0CZ17 362 aa2.35□□□□□ -2.03
SFT1YKL006C-A PRP18P33411 251 aaPredicted RBP2.35□□□□□ -2.03
SFT1YKL006C-A CBT1P36038 271 aaPredicted RBP2.35□□□□□ -2.03
SFT1YKL006C-A YBR241CP38142 488 aa2.35□□□□□ -2.03
SFT1YKL006C-A YBR062CP38239 180 aa2.35□□□□□ -2.03
SFT1YKL006C-A URA8P38627 578 aaPredicted RBP2.35□□□□□ -2.03
SFT1YKL006C-A LSM12P38828 187 aaKnown RBP2.35□□□□□ -2.03
SFT1YKL006C-A SMB1P40018 196 aaKnown RBP2.35□□□□□ -2.03
SFT1YKL006C-A ERG28P40030 148 aa2.35□□□□□ -2.03
SFT1YKL006C-A RFC4P40339 323 aaKnown RBP2.35□□□□□ -2.03
SFT1YKL006C-A YRB1P41920 201 aaKnown RBP2.35□□□□□ -2.03
SFT1YKL006C-A YJR012CP47087 207 aa2.35□□□□□ -2.03
SFT1YKL006C-A IBA57P47158 497 aa2.35□□□□□ -2.03
SFT1YKL006C-A CWC23P52868 283 aaPredicted RBP2.35□□□□□ -2.03
SFT1YKL006C-A VEL1P53058 206 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms