RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	DDI3	P0CH64	225 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	HEM15	P16622	393 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	DAL82	P21705	255 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	PRE1	P22141	198 aa	Known RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
AVT1	YJR001W	CDC20	P26309	610 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	GAR1	P28007	205 aa	Known RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	LST4	P34239	828 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	DRE2	P36152	348 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	PRS3	P38689	320 aa	Known RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	DHH1	P39517	506 aa	Known RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	MBB1	P39534	108 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	FAU1	P40099	211 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YIL067C	P40514	678 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	URM1	P40554	99 aa	Predicted RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	TRS85	P46944	698 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YJR030C	P47101	745 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	HOC1	P47124	396 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	SPT20	P50875	604 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YGR035C	P53222	116 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YTP1	P53584	459 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YDR391C	Q04170	232 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	SFH1	Q06168	426 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	RAD34	Q06665	692 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YET3	Q07451	203 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	FEX1	Q08913	375 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	TRM13	Q12383	476 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YHR213W-A	Q8TGT4	77 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YER175W-A	Q8TGU4	54 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YLL053C	P0CD98	152 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	DPM1	P14020	267 aa	Known RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	CCA1	P21269	546 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	GAC1	P28006	793 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	SCM4	P32564	187 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	BCS1	P32839	456 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	MIC12	P38341	106 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	HIS2	P38635	335 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	EFM1	P38732	585 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	NPT1	P39683	429 aa	Known RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	DSE1	P40077	573 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	COX15	P40086	486 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	PGD1	P40356	397 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	PTR3	P43606	678 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	ADO1	P47143	340 aa	Known RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	LYS20	P48570	428 aa	Known RBP	4.07	□□□□□ -1.76
AVT1	YJR001W	COG7	P53195	279 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	HST3	P53687	447 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YCL001W-A	P87012	153 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	DPP1	Q05521	289 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	PEX10	Q05568	337 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	RUP1	Q12242	671 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	YDR461C-A	Q2V2P7	80 aa		4.07	□□□□□ -1.76
AVT1	YJR001W	COR1	P07256	457 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	RPS1B	P23248	255 aa	Known RBP	4.06	□□□□□ -1.76
AVT1	YJR001W	TRR1	P29509	319 aa	Known RBP	4.06	□□□□□ -1.76
AVT1	YJR001W	ERG9	P29704	444 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	MSK1	P32048	576 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	CDC5	P32562	705 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	YKL162C	P36052	402 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	COS8	P38723	381 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	EXO1	P39875	702 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	OXA1	P39952	402 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	ASG7	P46993	209 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	LYS5	P50113	272 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	MTL1	P53214	551 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	BOR1	P53838	576 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	ERG5	P54781	538 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	TPS1	Q00764	495 aa	Known RBP	4.06	□□□□□ -1.76
AVT1	YJR001W	SDH7	Q04401	133 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	YML096W	Q04489	525 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	COQ11	Q05892	277 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	TPO3	Q06451	622 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	TEN1	Q07921	160 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	GAS5	Q08193	484 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	YPL257W	Q08974	193 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	SWM1	Q12379	170 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	YPR1	Q12458	312 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	RRI1	Q12468	440 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	YKL183C-A	Q3E765	70 aa		4.06	□□□□□ -1.76
AVT1	YJR001W	ATP10	P18496	279 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	PHO13	P19881	312 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	PUT3	P25502	979 aa	Predicted RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	AHC2	P25649	128 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	CNE1	P27825	502 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	SUA7	P29055	345 aa	Predicted RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	RNP1	P32385	249 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	TMT1	P32643	299 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	REC114	P32841	428 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	RPL32	P38061	130 aa	Known RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	YPT31	P38555	223 aa	Known RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	ATG7	P38862	630 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	PAC2	P39937	518 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	YNL194C	P40169	301 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	RFC2	P40348	353 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	YPS6	P40583	537 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	YFR020W	P43600	232 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	YJR079W	P47126	109 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	KIN4	Q01919	800 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	CTK1	Q03957	528 aa	Known RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	ADH6	Q04894	360 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms