RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W CLB2P24869 491 aa8.84□□□□□ -0.99
UBA4YHR111W ERG4P25340 473 aa8.84□□□□□ -0.99
UBA4YHR111W PRP21P32524 280 aaPredicted RBP8.84□□□□□ -0.99
UBA4YHR111W SSE2P32590 693 aaKnown RBP8.84□□□□□ -0.99
UBA4YHR111W RSM22P36056 628 aa8.84□□□□□ -0.99
UBA4YHR111W MNT4P53745 580 aa8.84□□□□□ -0.99
UBA4YHR111W GRX5Q02784 150 aa8.84□□□□□ -0.99
UBA4YHR111W RSM28Q03430 361 aa8.84□□□□□ -0.99
UBA4YHR111W THI72Q08579 599 aa8.84□□□□□ -0.99
UBA4YHR111W TY1A-BLQ12266 440 aa8.84□□□□□ -0.99
UBA4YHR111W RAS1P01119 309 aa8.83□□□□□ -1
UBA4YHR111W PCL1P24867 279 aa8.83□□□□□ -1
UBA4YHR111W RPC34P32910 317 aa8.83□□□□□ -1
UBA4YHR111W ECM1P39715 212 aa8.83□□□□□ -1
UBA4YHR111W LSM4P40070 187 aaKnown RBP8.83□□□□□ -1
UBA4YHR111W BUR6P40096 142 aa8.83□□□□□ -1
UBA4YHR111W QDR1P40475 563 aa8.83□□□□□ -1
UBA4YHR111W VOA1P53262 265 aa8.83□□□□□ -1
UBA4YHR111W ASI3P53983 676 aa8.83□□□□□ -1
UBA4YHR111W AIM36Q03798 255 aa8.83□□□□□ -1
UBA4YHR111W YMR315WQ04869 349 aaKnown RBP8.83□□□□□ -1
UBA4YHR111W AIM6Q07716 390 aa8.83□□□□□ -1
UBA4YHR111W TMC1Q08422 150 aaPredicted RBP8.83□□□□□ -1
UBA4YHR111W RRI1Q12468 440 aa8.83□□□□□ -1
UBA4YHR111W SCEIP03882 235 aa8.82□□□□□ -1
UBA4YHR111W KIN28P06242 306 aa8.82□□□□□ -1
UBA4YHR111W FPS1P23900 669 aa8.82□□□□□ -1
UBA4YHR111W CLB6P32943 380 aa8.82□□□□□ -1
UBA4YHR111W SOP4P39543 234 aaPredicted RBP8.82□□□□□ -1
UBA4YHR111W YJL055WP47044 245 aa8.82□□□□□ -1
UBA4YHR111W RMD9P53140 646 aaKnown RBP8.82□□□□□ -1
UBA4YHR111W CRZ1P53968 678 aa8.82□□□□□ -1
UBA4YHR111W SKO1Q02100 647 aa8.82□□□□□ -1
UBA4YHR111W FIN1Q03898 291 aa8.82□□□□□ -1
UBA4YHR111W Q0297Q9ZZV8 51 aa8.82□□□□□ -1
UBA4YHR111W IDP1P21954 428 aaKnown RBP8.81□□□□□ -1
UBA4YHR111W MEK1P24719 497 aaPredicted RBP8.81□□□□□ -1
UBA4YHR111W FUN19P28003 413 aaPredicted RBP8.81□□□□□ -1
UBA4YHR111W NDC1P32500 655 aa8.81□□□□□ -1
UBA4YHR111W SPC29P33419 253 aa8.81□□□□□ -1
UBA4YHR111W YHR035WP38769 630 aa8.81□□□□□ -1
UBA4YHR111W EGD2P38879 174 aaKnown RBP8.81□□□□□ -1
UBA4YHR111W AIM10P39965 576 aaKnown RBP8.81□□□□□ -1
UBA4YHR111W UBC13P52490 153 aa8.81□□□□□ -1
UBA4YHR111W YMR087WQ04299 284 aa8.81□□□□□ -1
UBA4YHR111W MRX8Q05473 314 aa8.81□□□□□ -1
UBA4YHR111W YOR097CQ12274 175 aaPredicted RBP8.81□□□□□ -1
UBA4YHR111W SUR1P33300 382 aa8.8□□□□□ -1
UBA4YHR111W ECT1P33412 323 aa8.8□□□□□ -1
UBA4YHR111W SPT10P35208 640 aa8.8□□□□□ -1
UBA4YHR111W APL3P38065 1025 aa8.8□□□□□ -1
UBA4YHR111W YLF2P38746 405 aa8.8□□□□□ -1
UBA4YHR111W MDM31P38880 579 aa8.8□□□□□ -1
UBA4YHR111W GDS1P41913 522 aa8.8□□□□□ -1
UBA4YHR111W LOH1P47055 219 aa8.8□□□□□ -1
UBA4YHR111W SLD3P53135 668 aa8.8□□□□□ -1
UBA4YHR111W LAP3Q01532 483 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
UBA4YHR111W YTH1Q06102 208 aaPredicted RBP8.8□□□□□ -1
UBA4YHR111W COX5BP00425 151 aa8.8□□□□□ -1
UBA4YHR111W DBF2P22204 572 aa8.8□□□□□ -1
UBA4YHR111W BOS1P25385 244 aa8.8□□□□□ -1
UBA4YHR111W DAL80P26343 269 aa8.8□□□□□ -1
UBA4YHR111W YKL107WP34251 309 aa8.8□□□□□ -1
UBA4YHR111W CLG1P35190 452 aa8.8□□□□□ -1
UBA4YHR111W YIP5P53108 310 aa8.8□□□□□ -1
UBA4YHR111W SAY1P53324 424 aa8.8□□□□□ -1
UBA4YHR111W SED1Q01589 338 aa8.8□□□□□ -1
UBA4YHR111W YPL077CQ02831 240 aa8.8□□□□□ -1
UBA4YHR111W ARP10Q04549 284 aa8.8□□□□□ -1
UBA4YHR111W RKM1Q08961 583 aaPredicted RBP8.8□□□□□ -1
UBA4YHR111W SRL2Q12020 392 aa8.8□□□□□ -1
UBA4YHR111W YPK3P38070 525 aa8.79□□□□□ -1
UBA4YHR111W SHE1P38200 338 aa8.79□□□□□ -1
UBA4YHR111W ECM14P38836 430 aa8.79□□□□□ -1
UBA4YHR111W IPT1P38954 527 aa8.79□□□□□ -1
UBA4YHR111W SDP1P40479 209 aa8.79□□□□□ -1
UBA4YHR111W YIL029CP40538 142 aa8.79□□□□□ -1
UBA4YHR111W TEX1P53851 422 aaKnown RBP8.79□□□□□ -1
UBA4YHR111W RSM23Q01163 450 aa8.79□□□□□ -1
UBA4YHR111W TLG1Q03322 224 aa8.79□□□□□ -1
UBA4YHR111W DIG2Q03373 323 aaKnown RBP8.79□□□□□ -1
UBA4YHR111W YDR391CQ04170 232 aa8.79□□□□□ -1
UBA4YHR111W RNH1Q04740 348 aa8.79□□□□□ -1
UBA4YHR111W BRE4Q07660 1125 aa8.79□□□□□ -1
UBA4YHR111W YOR378WQ08902 515 aa8.79□□□□□ -1
UBA4YHR111W VCX1Q99385 411 aa8.79□□□□□ -1
UBA4YHR111W PDE2P06776 526 aa8.78□□□□□ -1
UBA4YHR111W DSF1P0CX08 502 aa8.78□□□□□ -1
UBA4YHR111W YNR073CP0CX09 502 aa8.78□□□□□ -1
UBA4YHR111W RPA135P22138 1203 aaKnown RBP8.78□□□□□ -1
UBA4YHR111W DTR1P38125 572 aa8.78□□□□□ -1
UBA4YHR111W YIL012WP40551 113 aa8.78□□□□□ -1
UBA4YHR111W GAT3Q07928 141 aa8.78□□□□□ -1
UBA4YHR111W YGK3Q12222 375 aaPredicted RBP8.78□□□□□ -1
UBA4YHR111W SPO24Q3E752 67 aa8.78□□□□□ -1
UBA4YHR111W YGL041W-AP0C5N3 154 aa8.77□□□□□ -1.01
UBA4YHR111W RPS23AP0CX29 145 aaKnown RBP8.77□□□□□ -1.01
UBA4YHR111W RPS23BP0CX30 145 aa8.77□□□□□ -1.01
UBA4YHR111W GLC7P32598 312 aaKnown RBP8.77□□□□□ -1.01
UBA4YHR111W ECM4P36156 370 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms