RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W FAU1P40099 211 aa3.17□□□□□ -1.9
BCD1YHR040W LAS21P40367 830 aa3.17□□□□□ -1.9
BCD1YHR040W SER2P42941 309 aa3.17□□□□□ -1.9
BCD1YHR040W IRC7P43623 340 aa3.17□□□□□ -1.9
BCD1YHR040W MDV1P47025 714 aa3.17□□□□□ -1.9
BCD1YHR040W JHD2P47156 728 aaPredicted RBP3.17□□□□□ -1.9
BCD1YHR040W BAT2P47176 376 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W BIO3P50277 480 aa3.17□□□□□ -1.9
BCD1YHR040W YNL092WP53934 400 aa3.17□□□□□ -1.9
BCD1YHR040W AQR1P53943 586 aa3.17□□□□□ -1.9
BCD1YHR040W EGD1Q02642 157 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W MSC3Q05812 728 aa3.17□□□□□ -1.9
BCD1YHR040W YPR172WQ06608 200 aa3.17□□□□□ -1.9
BCD1YHR040W YDL086WQ07505 273 aa3.17□□□□□ -1.9
BCD1YHR040W GSH2Q08220 491 aa3.17□□□□□ -1.9
BCD1YHR040W RRP40Q08285 240 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W UIP4Q08926 304 aa3.17□□□□□ -1.9
BCD1YHR040W YPL199CQ08954 240 aa3.17□□□□□ -1.9
BCD1YHR040W SAM4Q08985 325 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W THP3Q12049 470 aaKnown RBP3.17□□□□□ -1.9
BCD1YHR040W YLR126CQ12288 251 aa3.17□□□□□ -1.9
BCD1YHR040W YPR064WQ12492 139 aa3.17□□□□□ -1.9
BCD1YHR040W YIL002W-AQ3E7Z5 69 aa3.17□□□□□ -1.9
BCD1YHR040W YLR422WQ06409 1932 aa3.17□□□□□ -1.9
BCD1YHR040W LEU4P06208 619 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W RPS14AP06367 137 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W DPM1P14020 267 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W ARO3P14843 370 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W SPO7P18410 259 aa3.16□□□□□ -1.9
BCD1YHR040W PHO80P20052 293 aa3.16□□□□□ -1.9
BCD1YHR040W DBF2P22204 572 aa3.16□□□□□ -1.9
BCD1YHR040W MGR1P25573 417 aa3.16□□□□□ -1.9
BCD1YHR040W IMG1P25626 169 aa3.16□□□□□ -1.9
BCD1YHR040W LAC1P28496 418 aa3.16□□□□□ -1.9
BCD1YHR040W FAA1P30624 700 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W LHP1P33399 275 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W MSN2P33748 704 aa3.16□□□□□ -1.9
BCD1YHR040W RCN1P36054 211 aa3.16□□□□□ -1.9
BCD1YHR040W RSM22P36056 628 aa3.16□□□□□ -1.9
BCD1YHR040W VPS51P36116 164 aa3.16□□□□□ -1.9
BCD1YHR040W YPT10P38146 199 aa3.16□□□□□ -1.9
BCD1YHR040W IPI1P38803 334 aaPredicted RBP3.16□□□□□ -1.9
BCD1YHR040W BFR1P38934 470 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
BCD1YHR040W MET30P39014 640 aa3.16□□□□□ -1.9
BCD1YHR040W RPS14BP39516 138 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W ELO1P39540 310 aa3.16□□□□□ -1.9
BCD1YHR040W AIM2P39721 246 aa3.16□□□□□ -1.9
BCD1YHR040W PCL6P40038 420 aa3.16□□□□□ -1.9
BCD1YHR040W GDS1P41913 522 aa3.16□□□□□ -1.9
BCD1YHR040W RPA34P47006 233 aaPredicted RBP3.16□□□□□ -1.9
BCD1YHR040W YAE1P47118 141 aaPredicted RBP3.16□□□□□ -1.9
BCD1YHR040W ECM27P47144 725 aa3.16□□□□□ -1.9
BCD1YHR040W BPL1P48445 690 aaPredicted RBP3.16□□□□□ -1.9
BCD1YHR040W NBP35P52920 328 aa3.16□□□□□ -1.9
BCD1YHR040W YIP4P53093 235 aa3.16□□□□□ -1.9
BCD1YHR040W MPC1P53157 130 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W CPR8P53728 308 aa3.16□□□□□ -1.9
BCD1YHR040W RHO4Q00246 291 aa3.16□□□□□ -1.9
BCD1YHR040W TPS1Q00764 495 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W NUP116Q02630 1113 aa3.16□□□□□ -1.9
BCD1YHR040W MAK3Q03503 176 aa3.16□□□□□ -1.9
BCD1YHR040W YMR130WQ04223 302 aa3.16□□□□□ -1.9
BCD1YHR040W RNH202Q05635 350 aa3.16□□□□□ -1.9
BCD1YHR040W IPK1Q06667 281 aa3.16□□□□□ -1.9
BCD1YHR040W SRO7Q12038 1033 aa3.16□□□□□ -1.9
BCD1YHR040W AEP3Q12089 606 aa3.16□□□□□ -1.9
BCD1YHR040W RKI1Q12189 258 aa3.16□□□□□ -1.9
BCD1YHR040W TPO4Q12256 659 aa3.16□□□□□ -1.9
BCD1YHR040W YDR061WQ12298 539 aa3.16□□□□□ -1.9
BCD1YHR040W RRP12Q12754 1228 aaKnown RBP3.16□□□□□ -1.9
BCD1YHR040W SPS4P09937 338 aa3.15□□□□□ -1.91
BCD1YHR040W RPL31BP0C2H9 113 aaKnown RBP3.15□□□□□ -1.91
BCD1YHR040W HOM2P13663 365 aaKnown RBP3.15□□□□□ -1.91
BCD1YHR040W CHA1P25379 360 aaKnown RBP3.15□□□□□ -1.91
BCD1YHR040W PBN1P25580 416 aa3.15□□□□□ -1.91
BCD1YHR040W YIM1P28625 365 aa3.15□□□□□ -1.91
BCD1YHR040W ITR1P30605 584 aa3.15□□□□□ -1.91
BCD1YHR040W SPT14P32363 452 aa3.15□□□□□ -1.91
BCD1YHR040W HYM1P32464 399 aa3.15□□□□□ -1.91
BCD1YHR040W KRE6P32486 720 aa3.15□□□□□ -1.91
BCD1YHR040W SUI1P32911 108 aaKnown RBP3.15□□□□□ -1.91
BCD1YHR040W ECM15P35195 104 aa3.15□□□□□ -1.91
BCD1YHR040W SHE2P36068 246 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
BCD1YHR040W APL3P38065 1025 aa3.15□□□□□ -1.91
BCD1YHR040W VBA2P38358 474 aaKnown RBP3.15□□□□□ -1.91
BCD1YHR040W TRR2P38816 342 aa3.15□□□□□ -1.91
BCD1YHR040W SWM2P40342 146 aa3.15□□□□□ -1.91
BCD1YHR040W PFS2P42841 465 aaKnown RBP3.15□□□□□ -1.91
BCD1YHR040W YFR020WP43600 232 aa3.15□□□□□ -1.91
BCD1YHR040W ATG18P43601 500 aa3.15□□□□□ -1.91
BCD1YHR040W APS3P47064 194 aa3.15□□□□□ -1.91
BCD1YHR040W RMD9P53140 646 aaKnown RBP3.15□□□□□ -1.91
BCD1YHR040W ERG26P53199 349 aaKnown RBP3.15□□□□□ -1.91
BCD1YHR040W YGR067CP53243 804 aa3.15□□□□□ -1.91
BCD1YHR040W YGR151CP53287 111 aa3.15□□□□□ -1.91
BCD1YHR040W RRN9P53437 365 aa3.15□□□□□ -1.91
BCD1YHR040W COS1P53822 381 aa3.15□□□□□ -1.91
BCD1YHR040W AAT1Q01802 451 aa3.15□□□□□ -1.91
BCD1YHR040W AIM36Q03798 255 aa3.15□□□□□ -1.91
BCD1YHR040W SEC13Q04491 297 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms