RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W YLR446WQ06204 433 aa3.94□□□□□ -1.78
PRE9YGR135W CLP1Q08685 445 aaPredicted RBP3.94□□□□□ -1.78
PRE9YGR135W UBR2Q07963 1872 aa3.93□□□□□ -1.78
PRE9YGR135W VPS63O13549 108 aa3.93□□□□□ -1.78
PRE9YGR135W LEU4P06208 619 aaKnown RBP3.93□□□□□ -1.78
PRE9YGR135W PEP4P07267 405 aaKnown RBP3.93□□□□□ -1.78
PRE9YGR135W MET2P08465 486 aa3.93□□□□□ -1.78
PRE9YGR135W TFS1P14306 219 aa3.93□□□□□ -1.78
PRE9YGR135W ATP10P18496 279 aa3.93□□□□□ -1.78
PRE9YGR135W CKS1P20486 150 aaKnown RBP3.93□□□□□ -1.78
PRE9YGR135W OAC1P32332 324 aa3.93□□□□□ -1.78
PRE9YGR135W CAT2P32796 670 aaKnown RBP3.93□□□□□ -1.78
PRE9YGR135W PDR3P33200 976 aa3.93□□□□□ -1.78
PRE9YGR135W ASC1P38011 319 aaKnown RBP3.93□□□□□ -1.78
PRE9YGR135W BNA4P38169 460 aa3.93□□□□□ -1.78
PRE9YGR135W NVJ1P38881 321 aa3.93□□□□□ -1.78
PRE9YGR135W FET3P38993 636 aa3.93□□□□□ -1.78
PRE9YGR135W HPA3P39979 161 aa3.93□□□□□ -1.78
PRE9YGR135W CDC1P40986 491 aa3.93□□□□□ -1.78
PRE9YGR135W YJL043WP47053 257 aa3.93□□□□□ -1.78
PRE9YGR135W SCS3P53012 380 aa3.93□□□□□ -1.78
PRE9YGR135W JAC1P53193 184 aa3.93□□□□□ -1.78
PRE9YGR135W YGR067CP53243 804 aa3.93□□□□□ -1.78
PRE9YGR135W RRN9P53437 365 aa3.93□□□□□ -1.78
PRE9YGR135W COS1P53822 381 aa3.93□□□□□ -1.78
PRE9YGR135W MPS1P54199 764 aa3.93□□□□□ -1.78
PRE9YGR135W HXT11P54862 567 aa3.93□□□□□ -1.78
PRE9YGR135W STP1Q00947 519 aa3.93□□□□□ -1.78
PRE9YGR135W PRM15Q03262 622 aa3.93□□□□□ -1.78
PRE9YGR135W VHS1Q03785 461 aa3.93□□□□□ -1.78
PRE9YGR135W SNX41Q04053 625 aa3.93□□□□□ -1.78
PRE9YGR135W YMR087WQ04299 284 aa3.93□□□□□ -1.78
PRE9YGR135W SPG3Q04398 127 aaPredicted RBP3.93□□□□□ -1.78
PRE9YGR135W YPR172WQ06608 200 aa3.93□□□□□ -1.78
PRE9YGR135W LDB18Q07887 179 aa3.93□□□□□ -1.78
PRE9YGR135W YOR289WQ12012 251 aaPredicted RBP3.93□□□□□ -1.78
PRE9YGR135W YGL194C-AQ2V2P6 80 aa3.93□□□□□ -1.78
PRE9YGR135W YEL009C-AA0A023PZF2 135 aa3.92□□□□□ -1.78
PRE9YGR135W RIP1P08067 215 aa3.92□□□□□ -1.78
PRE9YGR135W YUR1P26725 428 aa3.92□□□□□ -1.78
PRE9YGR135W IDH1P28834 360 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
PRE9YGR135W SEC17P32602 292 aa3.92□□□□□ -1.78
PRE9YGR135W REC114P32841 428 aa3.92□□□□□ -1.78
PRE9YGR135W YUH1P35127 236 aa3.92□□□□□ -1.78
PRE9YGR135W MAK5P38112 773 aaPredicted RBP3.92□□□□□ -1.78
PRE9YGR135W MDM31P38880 579 aa3.92□□□□□ -1.78
PRE9YGR135W SSO2P39926 295 aa3.92□□□□□ -1.78
PRE9YGR135W PAN6P40459 309 aa3.92□□□□□ -1.78
PRE9YGR135W CIN1P40987 1014 aa3.92□□□□□ -1.78
PRE9YGR135W YHC3P47040 408 aa3.92□□□□□ -1.78
PRE9YGR135W STE24P47154 453 aa3.92□□□□□ -1.78
PRE9YGR135W PYK2P52489 506 aaKnown RBP3.92□□□□□ -1.78
PRE9YGR135W RPN14P53196 417 aa3.92□□□□□ -1.78
PRE9YGR135W SMM1P53720 384 aaKnown RBP3.92□□□□□ -1.78
PRE9YGR135W IRC15Q02733 499 aa3.92□□□□□ -1.78
PRE9YGR135W YDR541CQ03049 344 aa3.92□□□□□ -1.78
PRE9YGR135W EKI1Q03764 534 aa3.92□□□□□ -1.78
PRE9YGR135W MSS11Q03825 758 aa3.92□□□□□ -1.78
PRE9YGR135W BUR2Q05949 395 aa3.92□□□□□ -1.78
PRE9YGR135W TPO3Q06451 622 aa3.92□□□□□ -1.78
PRE9YGR135W MRPL35Q06678 367 aa3.92□□□□□ -1.78
PRE9YGR135W PLB3Q08108 686 aa3.92□□□□□ -1.78
PRE9YGR135W MRPL23Q12487 163 aaPredicted RBP3.92□□□□□ -1.78
PRE9YGR135W SFG1Q12507 346 aa3.92□□□□□ -1.78
PRE9YGR135W SRN2Q99176 213 aa3.92□□□□□ -1.78
PRE9YGR135W SIR2P06700 562 aa3.91□□□□□ -1.78
PRE9YGR135W NHP6BP11633 99 aaKnown RBP3.91□□□□□ -1.78
PRE9YGR135W FUS3P16892 353 aaKnown RBP3.91□□□□□ -1.78
PRE9YGR135W HOM6P31116 359 aaKnown RBP3.91□□□□□ -1.78
PRE9YGR135W ACB1P31787 87 aa3.91□□□□□ -1.78
PRE9YGR135W MIA40P36046 403 aa3.91□□□□□ -1.78
PRE9YGR135W YCR087C-AP37263 153 aa3.91□□□□□ -1.78
PRE9YGR135W TCM62P38228 572 aaKnown RBP3.91□□□□□ -1.78
PRE9YGR135W SHE3P38272 425 aaKnown RBP3.91□□□□□ -1.78
PRE9YGR135W YHR210CP38893 341 aa3.91□□□□□ -1.78
PRE9YGR135W AIM10P39965 576 aaKnown RBP3.91□□□□□ -1.78
PRE9YGR135W HHO1P53551 258 aa3.91□□□□□ -1.78
PRE9YGR135W FYV6P53913 173 aa3.91□□□□□ -1.78
PRE9YGR135W MSC3Q05812 728 aa3.91□□□□□ -1.78
PRE9YGR135W GPN3Q06543 272 aa3.91□□□□□ -1.78
PRE9YGR135W POS5Q06892 414 aa3.91□□□□□ -1.78
PRE9YGR135W YOR283WQ12040 230 aaKnown RBP3.91□□□□□ -1.78
PRE9YGR135W BSC1Q12140 328 aa3.91□□□□□ -1.78
PRE9YGR135W YRM1Q12340 786 aa3.91□□□□□ -1.78
PRE9YGR135W NDJ1Q12366 352 aa3.91□□□□□ -1.78
PRE9YGR135W MHT1Q12525 324 aa3.91□□□□□ -1.78
PRE9YGR135W TDH1P00360 332 aaKnown RBP3.9□□□□□ -1.79
PRE9YGR135W REP2P03872 296 aa3.9□□□□□ -1.79
PRE9YGR135W CDC43P18898 376 aa3.9□□□□□ -1.79
PRE9YGR135W NUP1P20676 1076 aa3.9□□□□□ -1.79
PRE9YGR135W UTR1P21373 530 aa3.9□□□□□ -1.79
PRE9YGR135W RSA4P25382 515 aaKnown RBP3.9□□□□□ -1.79
PRE9YGR135W TKL2P33315 681 aa3.9□□□□□ -1.79
PRE9YGR135W CBP4P37267 147 aa3.9□□□□□ -1.79
PRE9YGR135W RRN10P38204 145 aa3.9□□□□□ -1.79
PRE9YGR135W LDB7P38210 180 aa3.9□□□□□ -1.79
PRE9YGR135W ALG8P40351 577 aa3.9□□□□□ -1.79
PRE9YGR135W TES1P41903 349 aaKnown RBP3.9□□□□□ -1.79
PRE9YGR135W AGX1P43567 385 aa3.9□□□□□ -1.79
PRE9YGR135W GAT1P43574 510 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms