RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C GET2P40056 285 aa3.24□□□□□ -1.89
SPT4YGR063C OPT1P40897 799 aa3.24□□□□□ -1.89
SPT4YGR063C GAB1P41733 394 aa3.24□□□□□ -1.89
SPT4YGR063C IME4P41833 600 aa3.24□□□□□ -1.89
SPT4YGR063C MOB2P43563 287 aa3.24□□□□□ -1.89
SPT4YGR063C CSN12P47130 423 aa3.24□□□□□ -1.89
SPT4YGR063C IBA57P47158 497 aa3.24□□□□□ -1.89
SPT4YGR063C OST3P48439 350 aa3.24□□□□□ -1.89
SPT4YGR063C MGA1P53050 456 aa3.24□□□□□ -1.89
SPT4YGR063C RRT6P53117 311 aaPredicted RBP3.24□□□□□ -1.89
SPT4YGR063C FRE4P53746 719 aa3.24□□□□□ -1.89
SPT4YGR063C AAT1Q01802 451 aa3.24□□□□□ -1.89
SPT4YGR063C YKR011CQ02209 353 aa3.24□□□□□ -1.89
SPT4YGR063C YVH1Q02256 364 aaKnown RBP3.24□□□□□ -1.89
SPT4YGR063C VPS28Q02767 242 aa3.24□□□□□ -1.89
SPT4YGR063C GIP3Q03016 1276 aa3.24□□□□□ -1.89
SPT4YGR063C YML018CQ03730 393 aa3.24□□□□□ -1.89
SPT4YGR063C YDR248CQ03786 193 aa3.24□□□□□ -1.89
SPT4YGR063C RIM13Q03792 727 aa3.24□□□□□ -1.89
SPT4YGR063C YAP6Q03935 383 aa3.24□□□□□ -1.89
SPT4YGR063C DFG5Q05031 458 aa3.24□□□□□ -1.89
SPT4YGR063C NOC4Q06512 552 aaPredicted RBP3.24□□□□□ -1.89
SPT4YGR063C PUN1Q06991 263 aa3.24□□□□□ -1.89
SPT4YGR063C IZH3Q07959 543 aa3.24□□□□□ -1.89
SPT4YGR063C PAU23Q07987 124 aa3.24□□□□□ -1.89
SPT4YGR063C YOR059CQ08448 450 aaKnown RBP3.24□□□□□ -1.89
SPT4YGR063C NRT1Q08485 598 aa3.24□□□□□ -1.89
SPT4YGR063C ATG41Q12048 136 aa3.24□□□□□ -1.89
SPT4YGR063C BTS1Q12051 335 aa3.24□□□□□ -1.89
SPT4YGR063C YLR049CQ12110 428 aa3.24□□□□□ -1.89
SPT4YGR063C UPC2Q12151 913 aa3.24□□□□□ -1.89
SPT4YGR063C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SPT4YGR063C PAU17Q12370 124 aa3.24□□□□□ -1.89
SPT4YGR063C TRM13Q12383 476 aa3.24□□□□□ -1.89
SPT4YGR063C AIM45Q12480 344 aaKnown RBP3.24□□□□□ -1.89
SPT4YGR063C SNF8Q12483 233 aa3.24□□□□□ -1.89
SPT4YGR063C YPL247CQ12523 523 aa3.24□□□□□ -1.89
SPT4YGR063C IZH4Q99393 312 aa3.24□□□□□ -1.89
SPT4YGR063C HEM2P05373 342 aa3.23□□□□□ -1.89
SPT4YGR063C ILV5P06168 395 aaKnown RBP3.23□□□□□ -1.89
SPT4YGR063C YPR170W-BP0C5R9 85 aa3.23□□□□□ -1.89
SPT4YGR063C TY2A-FP0CX61 438 aa3.23□□□□□ -1.89
SPT4YGR063C TY2A-GR2P0CX62 438 aa3.23□□□□□ -1.89
SPT4YGR063C HSP26P15992 214 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SPT4YGR063C STE4P18851 423 aa3.23□□□□□ -1.89
SPT4YGR063C SAM2P19358 384 aaKnown RBP3.23□□□□□ -1.89
SPT4YGR063C PPH21P23594 369 aa3.23□□□□□ -1.89
SPT4YGR063C EXG1P23776 448 aaKnown RBP3.23□□□□□ -1.89
SPT4YGR063C KIN82P25341 720 aa3.23□□□□□ -1.89
SPT4YGR063C PUT3P25502 979 aaPredicted RBP3.23□□□□□ -1.89
SPT4YGR063C STP22P25604 385 aa3.23□□□□□ -1.89
SPT4YGR063C POP5P28005 173 aa3.23□□□□□ -1.89
SPT4YGR063C SEC17P32602 292 aa3.23□□□□□ -1.89
SPT4YGR063C RML2P32611 393 aa3.23□□□□□ -1.89
SPT4YGR063C SKT5P34226 696 aa3.23□□□□□ -1.89
SPT4YGR063C YUH1P35127 236 aa3.23□□□□□ -1.89
SPT4YGR063C YPT53P36019 220 aa3.23□□□□□ -1.89
SPT4YGR063C MRPL11P36521 249 aaPredicted RBP3.23□□□□□ -1.89
SPT4YGR063C YCR087C-AP37263 153 aa3.23□□□□□ -1.89
SPT4YGR063C YPC1P38298 316 aa3.23□□□□□ -1.89
SPT4YGR063C YBR220CP38318 560 aa3.23□□□□□ -1.89
SPT4YGR063C TRS20P38334 175 aa3.23□□□□□ -1.89
SPT4YGR063C LRP1P38801 184 aaKnown RBP3.23□□□□□ -1.89
SPT4YGR063C SFB3P38810 929 aa3.23□□□□□ -1.89
SPT4YGR063C HEM14P40012 539 aa3.23□□□□□ -1.89
SPT4YGR063C AVT7P40501 490 aa3.23□□□□□ -1.89
SPT4YGR063C SYS1P41544 203 aa3.23□□□□□ -1.89
SPT4YGR063C YGL114WP53134 725 aa3.23□□□□□ -1.89
SPT4YGR063C LCL3P53153 274 aa3.23□□□□□ -1.89
SPT4YGR063C PEX31P53203 462 aa3.23□□□□□ -1.89
SPT4YGR063C PUS6P53294 404 aa3.23□□□□□ -1.89
SPT4YGR063C YNR066CP53752 436 aa3.23□□□□□ -1.89
SPT4YGR063C IBD2P53892 351 aa3.23□□□□□ -1.89
SPT4YGR063C APJ1P53940 528 aa3.23□□□□□ -1.89
SPT4YGR063C YPL067CQ02754 198 aa3.23□□□□□ -1.89
SPT4YGR063C EMI1Q04406 187 aa3.23□□□□□ -1.89
SPT4YGR063C NAT4Q04751 285 aa3.23□□□□□ -1.89
SPT4YGR063C YLR346CQ06139 101 aa3.23□□□□□ -1.89
SPT4YGR063C PEX30Q06169 523 aa3.23□□□□□ -1.89
SPT4YGR063C YLR179CQ06252 201 aaKnown RBP3.23□□□□□ -1.89
SPT4YGR063C ATG10Q07879 167 aa3.23□□□□□ -1.89
SPT4YGR063C TEN1Q07921 160 aa3.23□□□□□ -1.89
SPT4YGR063C AIM39Q08223 395 aa3.23□□□□□ -1.89
SPT4YGR063C TY1A-NL1Q12391 440 aaKnown RBP3.23□□□□□ -1.89
SPT4YGR063C RDI1Q12434 202 aa3.23□□□□□ -1.89
SPT4YGR063C HKR1P41809 1802 aa3.23□□□□□ -1.89
SPT4YGR063C MSW1P04803 379 aa3.22□□□□□ -1.89
SPT4YGR063C GDH1P07262 454 aaKnown RBP3.22□□□□□ -1.89
SPT4YGR063C PRB1P09232 635 aa3.22□□□□□ -1.89
SPT4YGR063C TY2A-LR1P0C2J4 438 aa3.22□□□□□ -1.89
SPT4YGR063C SST2P11972 698 aaKnown RBP3.22□□□□□ -1.89
SPT4YGR063C UNG1P12887 359 aa3.22□□□□□ -1.89
SPT4YGR063C ART10P18634 518 aaKnown RBP3.22□□□□□ -1.89
SPT4YGR063C ESS1P22696 170 aa3.22□□□□□ -1.89
SPT4YGR063C TY2A-CP25383 438 aa3.22□□□□□ -1.89
SPT4YGR063C PER1P25625 357 aa3.22□□□□□ -1.89
SPT4YGR063C YJU3P28321 313 aa3.22□□□□□ -1.89
SPT4YGR063C AAR2P32357 355 aaPredicted RBP3.22□□□□□ -1.89
SPT4YGR063C TIP20P33891 701 aa3.22□□□□□ -1.89
SPT4YGR063C SHE2P36068 246 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms