RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W RPL24AP04449 155 aaKnown RBP2.45□□□□□ -2.02
SEC4YFL005W SUA5P32579 426 aa2.45□□□□□ -2.02
SEC4YFL005W CSE1P33307 960 aa2.45□□□□□ -2.02
SEC4YFL005W MRPL3P36516 390 aa2.45□□□□□ -2.02
SEC4YFL005W MRPL37P36532 105 aa2.45□□□□□ -2.02
SEC4YFL005W RCY1P39531 840 aa2.45□□□□□ -2.02
SEC4YFL005W KRE29P40026 464 aa2.45□□□□□ -2.02
SEC4YFL005W ASG7P46993 209 aa2.45□□□□□ -2.02
SEC4YFL005W LSB1P53281 241 aa2.45□□□□□ -2.02
SEC4YFL005W GMC2Q06201 188 aa2.45□□□□□ -2.02
SEC4YFL005W YOR114WQ12219 294 aa2.45□□□□□ -2.02
SEC4YFL005W FAB1P34756 2278 aa2.45□□□□□ -2.02
SEC4YFL005W IMP1P28627 190 aa2.44□□□□□ -2.02
SEC4YFL005W FMT1P32785 401 aa2.44□□□□□ -2.02
SEC4YFL005W PRP24P49960 444 aaKnown RBP2.44□□□□□ -2.02
SEC4YFL005W KAP114P53067 1004 aa2.44□□□□□ -2.02
SEC4YFL005W ZRG17P53735 605 aa2.44□□□□□ -2.02
SEC4YFL005W YPL113CQ02961 396 aa2.44□□□□□ -2.02
SEC4YFL005W VBA1Q04301 562 aa2.44□□□□□ -2.02
SEC4YFL005W YPL264CQ08980 353 aa2.44□□□□□ -2.02
SEC4YFL005W PET494P07390 489 aaPredicted RBP2.43□□□□□ -2.02
SEC4YFL005W YCR025CP25352 136 aa2.43□□□□□ -2.02
SEC4YFL005W YIL012WP40551 113 aa2.43□□□□□ -2.02
SEC4YFL005W COS4P43542 379 aa2.43□□□□□ -2.02
SEC4YFL005W IBA57P47158 497 aa2.43□□□□□ -2.02
SEC4YFL005W COG7P53195 279 aa2.43□□□□□ -2.02
SEC4YFL005W YNL040WP53960 456 aaPredicted RBP2.43□□□□□ -2.02
SEC4YFL005W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
SEC4YFL005W TRM44Q02648 567 aaKnown RBP2.43□□□□□ -2.02
SEC4YFL005W CSI1Q04368 295 aa2.43□□□□□ -2.02
SEC4YFL005W KAP95Q06142 861 aaKnown RBP2.43□□□□□ -2.02
SEC4YFL005W YLL007CQ07799 665 aa2.43□□□□□ -2.02
SEC4YFL005W YAL063C-AQ3E791 96 aa2.43□□□□□ -2.02
SEC4YFL005W INO80P53115 1489 aa2.42□□□□□ -2.02
SEC4YFL005W ARO4P32449 370 aaKnown RBP2.42□□□□□ -2.02
SEC4YFL005W YHL044WP38727 235 aa2.42□□□□□ -2.02
SEC4YFL005W AVT7P40501 490 aa2.42□□□□□ -2.02
SEC4YFL005W UFD1P53044 361 aa2.42□□□□□ -2.02
SEC4YFL005W MPP6P53725 186 aaPredicted RBP2.42□□□□□ -2.02
SEC4YFL005W VPS60Q03390 229 aa2.42□□□□□ -2.02
SEC4YFL005W SFH1Q06168 426 aa2.42□□□□□ -2.02
SEC4YFL005W YDL144CQ07589 356 aa2.42□□□□□ -2.02
SEC4YFL005W SSK22P25390 1331 aaPredicted RBP2.42□□□□□ -2.02
SEC4YFL005W RPS3P05750 240 aaKnown RBP2.41□□□□□ -2.02
SEC4YFL005W MET16P18408 261 aaPredicted RBP2.41□□□□□ -2.02
SEC4YFL005W PHO80P20052 293 aa2.41□□□□□ -2.02
SEC4YFL005W OSM1P21375 501 aaKnown RBP2.41□□□□□ -2.02
SEC4YFL005W VPS1P21576 704 aaKnown RBP2.41□□□□□ -2.02
SEC4YFL005W AST1P35183 429 aa2.41□□□□□ -2.02
SEC4YFL005W PRY2P36110 329 aa2.41□□□□□ -2.02
SEC4YFL005W HSM3P38348 480 aa2.41□□□□□ -2.02
SEC4YFL005W NPT1P39683 429 aaKnown RBP2.41□□□□□ -2.02
SEC4YFL005W SEN34P39707 275 aa2.41□□□□□ -2.02
SEC4YFL005W AVT6P40074 448 aa2.41□□□□□ -2.02
SEC4YFL005W SCC4P40090 624 aa2.41□□□□□ -2.02
SEC4YFL005W SYS1P41544 203 aa2.41□□□□□ -2.02
SEC4YFL005W PFS2P42841 465 aaKnown RBP2.41□□□□□ -2.02
SEC4YFL005W TAD2P47058 250 aa2.41□□□□□ -2.02
SEC4YFL005W PEX31P53203 462 aa2.41□□□□□ -2.02
SEC4YFL005W MRS2Q01926 470 aa2.41□□□□□ -2.02
SEC4YFL005W ATC1Q04005 294 aa2.41□□□□□ -2.02
SEC4YFL005W PER33Q12144 273 aa2.41□□□□□ -2.02
SEC4YFL005W YAL064W-BO13512 126 aa2.4□□□□□ -2.03
SEC4YFL005W POF1P25576 258 aa2.4□□□□□ -2.03
SEC4YFL005W KRE6P32486 720 aa2.4□□□□□ -2.03
SEC4YFL005W COT1P32798 439 aa2.4□□□□□ -2.03
SEC4YFL005W COA1P40452 197 aa2.4□□□□□ -2.03
SEC4YFL005W YFR045WP43617 309 aa2.4□□□□□ -2.03
SEC4YFL005W NNT1Q05874 261 aa2.4□□□□□ -2.03
SEC4YFL005W SEC10Q06245 871 aa2.4□□□□□ -2.03
SEC4YFL005W SGT2Q12118 346 aaKnown RBP2.4□□□□□ -2.03
SEC4YFL005W IES3Q12345 250 aa2.4□□□□□ -2.03
SEC4YFL005W YMR316C-AI2HB70 103 aa2.39□□□□□ -2.03
SEC4YFL005W COX2P00410 251 aa2.39□□□□□ -2.03
SEC4YFL005W PRE7P23724 241 aaKnown RBP2.39□□□□□ -2.03
SEC4YFL005W ATG15P25641 520 aa2.39□□□□□ -2.03
SEC4YFL005W PEX3P28795 441 aa2.39□□□□□ -2.03
SEC4YFL005W YUH1P35127 236 aa2.39□□□□□ -2.03
SEC4YFL005W MED8P38304 223 aa2.39□□□□□ -2.03
SEC4YFL005W SHC1P39000 512 aa2.39□□□□□ -2.03
SEC4YFL005W PRM9P39551 298 aa2.39□□□□□ -2.03
SEC4YFL005W YIL059CP40520 121 aa2.39□□□□□ -2.03
SEC4YFL005W YAR1P46683 200 aa2.39□□□□□ -2.03
SEC4YFL005W MNT4P53745 580 aa2.39□□□□□ -2.03
SEC4YFL005W CDC14Q00684 551 aa2.39□□□□□ -2.03
SEC4YFL005W YPR195CQ06594 109 aa2.39□□□□□ -2.03
SEC4YFL005W YOS9Q99220 542 aa2.39□□□□□ -2.03
SEC4YFL005W HIS1P00498 297 aaKnown RBP2.38□□□□□ -2.03
SEC4YFL005W RPP0P05317 312 aaKnown RBP2.38□□□□□ -2.03
SEC4YFL005W YAK1P14680 807 aa2.38□□□□□ -2.03
SEC4YFL005W POL30P15873 258 aaKnown RBP2.38□□□□□ -2.03
SEC4YFL005W CDC42P19073 191 aa2.38□□□□□ -2.03
SEC4YFL005W AGA2P32781 87 aa2.38□□□□□ -2.03
SEC4YFL005W ALK2P32789 676 aaPredicted RBP2.38□□□□□ -2.03
SEC4YFL005W CAT2P32796 670 aaKnown RBP2.38□□□□□ -2.03
SEC4YFL005W POP8P38208 133 aa2.38□□□□□ -2.03
SEC4YFL005W ATG12P38316 186 aa2.38□□□□□ -2.03
SEC4YFL005W DDI1P40087 428 aa2.38□□□□□ -2.03
SEC4YFL005W CPR7P47103 393 aa2.38□□□□□ -2.03
SEC4YFL005W TIM21P53220 239 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms