RNA–Protein interactions for RNA: YEL052W

AFG1, Transcript of Protein that may act as a chaperone for cytochrome c oxidase subunits, yeast

Gene AFG1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG1	YEL052W	SRY1	P36007	326 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YKL162C	P36052	402 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	TSL1	P38427	1098 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	PRS3	P38689	320 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	YHR033W	P38690	423 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	MDM31	P38880	579 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	AIM46	P38885	310 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	ELO1	P39540	310 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	SLM1	P40485	686 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	BAP3	P41815	604 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YGR201C	P42936	225 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	NSE4	P43124	402 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YFR020W	P43600	232 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	MRX5	P47007	382 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	HMS2	P47175	358 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	SNN1	P48232	102 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	MDM34	P53083	459 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	SUN4	P53616	420 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YNR062C	P53748	327 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	GUP2	Q08929	609 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YEL009C-A	A0A023PZF2	135 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	PPH21	P23594	369 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	IFM1	P25038	676 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	EMP24	P32803	203 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	SPT10	P35208	640 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	SRP102	P36057	244 aa	Predicted RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	TUL1	P36096	758 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YBR063C	P38083	404 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	TRM7	P38238	310 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	YAL037W	P39728	267 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	RRG9	P40156	214 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	UTP25	P40498	721 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	GAB1	P41733	394 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	PSA1	P41940	361 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	CIS3	P47001	227 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	TIM21	P53220	239 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	RSM27	P53305	110 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YNL260C	P53846	198 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YPL108W	Q02872	168 aa	Predicted RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	CTK1	Q03957	528 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	YDR387C	Q04162	555 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	DCR2	Q05924	578 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	GPN3	Q06543	272 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	NDE2	Q07500	545 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	RRP40	Q08285	240 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	SCP1	Q08873	200 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	YPL245W	Q12179	454 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	RPN5	Q12250	445 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	YPR011C	Q12251	326 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	RKM5	Q12367	367 aa		5.69	□□□□□ -1.5
AFG1	YEL052W	HRP1	Q99383	534 aa	Known RBP	5.69	□□□□□ -1.5
AFG1	YEL052W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-DR6	P0CX70	440 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-ER1	P0CX71	440 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-LR2	P0CX72	440 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-PL	P0CX73	440 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-JR1	P0CX74	440 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-LR3	P0CX75	440 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-ML2	P0CX76	440 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TFS1	P14306	219 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	SNF6	P18888	332 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	MRPL44	P19956	98 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	HOP1	P20050	605 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	BUD5	P25300	642 aa	Predicted RBP	5.68	□□□□□ -1.5
AFG1	YEL052W	CDC50	P25656	391 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	HXT4	P32467	576 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	GSH1	P32477	678 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	CAT2	P32796	670 aa	Known RBP	5.68	□□□□□ -1.5
AFG1	YEL052W	SFC1	P33303	322 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	KKQ8	P36004	724 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	MRPL36	P36531	177 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	YPS6	P40583	537 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	MCM22	P47167	239 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	GTO1	P48239	356 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	ASK10	P48361	1146 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	NIT3	P49954	291 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	IMO32	P53219	342 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	GIP3	Q03016	1276 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	PLB2	Q03674	706 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	YMR087W	Q04299	284 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	YML096W	Q04489	525 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	YDR124W	Q04608	324 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	MRPL35	Q06678	367 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-GR1	Q12085	440 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	RGT2	Q12300	763 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.68	□□□□□ -1.5
AFG1	YEL052W	YCL012C	Q8J0M4	134 aa		5.68	□□□□□ -1.5
AFG1	YEL052W	TY1A-OL	Q92392	440 aa	Known RBP	5.68	□□□□□ -1.5
AFG1	YEL052W	GAL4	P04386	881 aa		5.67	□□□□□ -1.5
AFG1	YEL052W	RPS18A	P0CX55	146 aa	Known RBP	5.67	□□□□□ -1.5
AFG1	YEL052W	RPS18B	P0CX56	146 aa	Predicted RBP	5.67	□□□□□ -1.5
AFG1	YEL052W	EMC3	P36039	253 aa		5.67	□□□□□ -1.5
AFG1	YEL052W	UTH1	P36135	365 aa		5.67	□□□□□ -1.5
AFG1	YEL052W	GGC1	P38988	300 aa		5.67	□□□□□ -1.5
AFG1	YEL052W	ICE2	P40499	491 aa		5.67	□□□□□ -1.5
AFG1	YEL052W	YGL159W	P53110	370 aa		5.67	□□□□□ -1.5
AFG1	YEL052W	IGO1	P53897	168 aa		5.67	□□□□□ -1.5
AFG1	YEL052W	RHO3	Q00245	231 aa	Known RBP	5.67	□□□□□ -1.5
AFG1	YEL052W	PLM2	Q04383	521 aa		5.67	□□□□□ -1.5
AFG1	YEL052W	SMA2	Q04658	369 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms