RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C TAD3Q9URQ3 322 aa5.15□□□□□ -1.59
SEC20YDR498C MRP10O75012 95 aa5.14□□□□□ -1.59
SEC20YDR498C COX9P07255 59 aa5.14□□□□□ -1.59
SEC20YDR498C MRP1P10662 321 aaKnown RBP5.14□□□□□ -1.59
SEC20YDR498C ARF1P11076 181 aaKnown RBP5.14□□□□□ -1.59
SEC20YDR498C STE12P13574 688 aa5.14□□□□□ -1.59
SEC20YDR498C CTA1P15202 515 aa5.14□□□□□ -1.59
SEC20YDR498C DBF2P22204 572 aa5.14□□□□□ -1.59
SEC20YDR498C AHC2P25649 128 aa5.14□□□□□ -1.59
SEC20YDR498C PRE4P30657 266 aa5.14□□□□□ -1.59
SEC20YDR498C PMT2P31382 759 aa5.14□□□□□ -1.59
SEC20YDR498C RNP1P32385 249 aa5.14□□□□□ -1.59
SEC20YDR498C PAU2P32612 120 aa5.14□□□□□ -1.59
SEC20YDR498C PDR3P33200 976 aa5.14□□□□□ -1.59
SEC20YDR498C UTP30P36144 274 aaKnown RBP5.14□□□□□ -1.59
SEC20YDR498C CHK1P38147 527 aa5.14□□□□□ -1.59
SEC20YDR498C VMA22P38784 181 aa5.14□□□□□ -1.59
SEC20YDR498C YHR180WP38868 163 aa5.14□□□□□ -1.59
SEC20YDR498C FET3P38993 636 aa5.14□□□□□ -1.59
SEC20YDR498C SDP1P40479 209 aa5.14□□□□□ -1.59
SEC20YDR498C DUG1P43616 481 aaKnown RBP5.14□□□□□ -1.59
SEC20YDR498C BRR6P53062 197 aa5.14□□□□□ -1.59
SEC20YDR498C LSM7P53905 115 aaKnown RBP5.14□□□□□ -1.59
SEC20YDR498C YLR460CP54007 376 aa5.14□□□□□ -1.59
SEC20YDR498C BUD25P85052 153 aa5.14□□□□□ -1.59
SEC20YDR498C ATG21Q02887 496 aa5.14□□□□□ -1.59
SEC20YDR498C NGL2Q03264 515 aaKnown RBP5.14□□□□□ -1.59
SEC20YDR498C RSM28Q03430 361 aa5.14□□□□□ -1.59
SEC20YDR498C COA4Q05809 96 aa5.14□□□□□ -1.59
SEC20YDR498C YLR456WQ06199 204 aa5.14□□□□□ -1.59
SEC20YDR498C GPN3Q06543 272 aa5.14□□□□□ -1.59
SEC20YDR498C SFG1Q12507 346 aa5.14□□□□□ -1.59
SEC20YDR498C QCR7P00128 127 aa5.13□□□□□ -1.59
SEC20YDR498C CPR2P23285 205 aa5.13□□□□□ -1.59
SEC20YDR498C VPS17P32913 551 aa5.13□□□□□ -1.59
SEC20YDR498C MSN4P33749 630 aa5.13□□□□□ -1.59
SEC20YDR498C TAF14P35189 244 aa5.13□□□□□ -1.59
SEC20YDR498C MTH1P35198 433 aa5.13□□□□□ -1.59
SEC20YDR498C YHR122WP38829 231 aa5.13□□□□□ -1.59
SEC20YDR498C FAA3P39002 694 aa5.13□□□□□ -1.59
SEC20YDR498C YER184CP39961 794 aa5.13□□□□□ -1.59
SEC20YDR498C IDS2P46958 469 aa5.13□□□□□ -1.59
SEC20YDR498C RPE1P46969 238 aa5.13□□□□□ -1.59
SEC20YDR498C SFH5P47008 294 aa5.13□□□□□ -1.59
SEC20YDR498C YIP4P53093 235 aa5.13□□□□□ -1.59
SEC20YDR498C MTL1P53214 551 aa5.13□□□□□ -1.59
SEC20YDR498C MRPS16Q02608 121 aa5.13□□□□□ -1.59
SEC20YDR498C SNX41Q04053 625 aa5.13□□□□□ -1.59
SEC20YDR498C COX20Q04935 205 aa5.13□□□□□ -1.59
SEC20YDR498C RGC1Q06108 1083 aaKnown RBP5.13□□□□□ -1.59
SEC20YDR498C KEI1Q06346 221 aa5.13□□□□□ -1.59
SEC20YDR498C TSR2Q06672 205 aaKnown RBP5.13□□□□□ -1.59
SEC20YDR498C AIM6Q07716 390 aa5.13□□□□□ -1.59
SEC20YDR498C YOR378WQ08902 515 aa5.13□□□□□ -1.59
SEC20YDR498C GCN4P03069 281 aa5.12□□□□□ -1.59
SEC20YDR498C RPS13P05756 151 aaKnown RBP5.12□□□□□ -1.59
SEC20YDR498C PDA1P16387 420 aaKnown RBP5.12□□□□□ -1.59
SEC20YDR498C NUP1P20676 1076 aa5.12□□□□□ -1.59
SEC20YDR498C PCL1P24867 279 aa5.12□□□□□ -1.59
SEC20YDR498C YCP4P25349 247 aaKnown RBP5.12□□□□□ -1.59
SEC20YDR498C NFS1P25374 497 aa5.12□□□□□ -1.59
SEC20YDR498C ERG9P29704 444 aa5.12□□□□□ -1.59
SEC20YDR498C ATS1P31386 333 aa5.12□□□□□ -1.59
SEC20YDR498C HYM1P32464 399 aa5.12□□□□□ -1.59
SEC20YDR498C GPX1P36014 167 aa5.12□□□□□ -1.59
SEC20YDR498C SHE2P36068 246 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
SEC20YDR498C TCM62P38228 572 aaKnown RBP5.12□□□□□ -1.59
SEC20YDR498C SDS24P38314 527 aa5.12□□□□□ -1.59
SEC20YDR498C SHR5P41912 237 aa5.12□□□□□ -1.59
SEC20YDR498C SLS1P42900 643 aa5.12□□□□□ -1.59
SEC20YDR498C MDE1P47095 244 aa5.12□□□□□ -1.59
SEC20YDR498C TDA1Q03533 586 aa5.12□□□□□ -1.59
SEC20YDR498C YPL199CQ08954 240 aa5.12□□□□□ -1.59
SEC20YDR498C YLR125WQ12138 136 aa5.12□□□□□ -1.59
SEC20YDR498C HSP42Q12329 375 aa5.12□□□□□ -1.59
SEC20YDR498C THI4P32318 326 aa5.11□□□□□ -1.59
SEC20YDR498C AGA2P32781 87 aa5.11□□□□□ -1.59
SEC20YDR498C SEF1P34228 1148 aa5.11□□□□□ -1.59
SEC20YDR498C SFK1P35735 353 aa5.11□□□□□ -1.59
SEC20YDR498C PHO90P39535 881 aa5.11□□□□□ -1.59
SEC20YDR498C YIL060WP40519 144 aa5.11□□□□□ -1.59
SEC20YDR498C PKP1P40530 394 aa5.11□□□□□ -1.59
SEC20YDR498C CAT5P41735 233 aa5.11□□□□□ -1.59
SEC20YDR498C DPB11P47027 764 aaPredicted RBP5.11□□□□□ -1.59
SEC20YDR498C YGL204CP53089 101 aa5.11□□□□□ -1.59
SEC20YDR498C PET191Q02772 108 aa5.11□□□□□ -1.59
SEC20YDR498C TPP1Q03796 238 aa5.11□□□□□ -1.59
SEC20YDR498C GIS1Q03833 894 aa5.11□□□□□ -1.59
SEC20YDR498C SIZ1Q04195 904 aa5.11□□□□□ -1.59
SEC20YDR498C MRPL51Q06090 140 aaPredicted RBP5.11□□□□□ -1.59
SEC20YDR498C SCM3Q12334 223 aa5.11□□□□□ -1.59
SEC20YDR498C SWM1Q12379 170 aa5.11□□□□□ -1.59
SEC20YDR498C HMS1Q12398 434 aa5.11□□□□□ -1.59
SEC20YDR498C YPR053CQ6Q5F3 151 aa5.11□□□□□ -1.59
SEC20YDR498C SPS2P08459 502 aa5.1□□□□□ -1.59
SEC20YDR498C YGL041W-AP0C5N3 154 aa5.1□□□□□ -1.59
SEC20YDR498C RPL3P14126 387 aaKnown RBP5.1□□□□□ -1.59
SEC20YDR498C STE18P18852 110 aa5.1□□□□□ -1.59
SEC20YDR498C DAL82P21705 255 aa5.1□□□□□ -1.59
SEC20YDR498C CNE1P27825 502 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms