RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	PSF1	Q12488	208 aa		4.26	□□□□□ -1.73
SUP35	YDR172W	GCN4	P03069	281 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	RPL6B	P05739	176 aa	Known RBP	4.25	□□□□□ -1.73
SUP35	YDR172W	RAD52	P06778	471 aa	Known RBP	4.25	□□□□□ -1.73
SUP35	YDR172W	STF2	P16965	84 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	CPR2	P23285	205 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	YCR006C	P25350	157 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	PUT3	P25502	979 aa	Predicted RBP	4.25	□□□□□ -1.73
SUP35	YDR172W	PBN1	P25580	416 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SUP35	YDR172W	TAF14	P35189	244 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	UTH1	P36135	365 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	YBR242W	P38331	238 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	HTD2	P38790	280 aa	Known RBP	4.25	□□□□□ -1.73
SUP35	YDR172W	MLH1	P38920	769 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	MSS4	P38994	779 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	ICE2	P40499	491 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	YIL086C	P40503	102 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	YFR054C	P43622	192 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	SFH5	P47008	294 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	NCE101	Q02820	53 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	YPR127W	Q06494	345 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	ASR1	Q06834	288 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	YOL073C	Q08232	322 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	RDR1	Q08904	546 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	FRE6	Q12473	712 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	SFG1	Q12507	346 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	YBR298C-A	Q8TGK4	73 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	FAS1	P07149	2051 aa	Known RBP	4.25	□□□□□ -1.73
SUP35	YDR172W	SPS2	P08459	502 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	SEC12	P11655	471 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	STP22	P25604	385 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	THI4	P32318	326 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	DOA4	P32571	926 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	PEX32	P38292	413 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	PHO90	P39535	881 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	HIS6	P40545	261 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	NAS2	P40555	220 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	DUG1	P43616	481 aa	Known RBP	4.25	□□□□□ -1.73
SUP35	YDR172W	BNA6	P43619	295 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	IDS2	P46958	469 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	MNN5	P46982	586 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	APS3	P47064	194 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	YJR141W	P47172	347 aa	Predicted RBP	4.25	□□□□□ -1.73
SUP35	YDR172W	BTS1	Q12051	335 aa		4.25	□□□□□ -1.73
SUP35	YDR172W	HTZ1	Q12692	134 aa	Known RBP	4.25	□□□□□ -1.73
SUP35	YDR172W	ADK1	P07170	222 aa	Known RBP	4.24	□□□□□ -1.73
SUP35	YDR172W	PEP4	P07267	405 aa	Known RBP	4.24	□□□□□ -1.73
SUP35	YDR172W	YGL041W-A	P0C5N3	154 aa		4.24	□□□□□ -1.73
SUP35	YDR172W	YCP4	P25349	247 aa	Known RBP	4.24	□□□□□ -1.73
SUP35	YDR172W	FUN19	P28003	413 aa	Predicted RBP	4.24	□□□□□ -1.73
SUP35	YDR172W	DCG1	P32460	244 aa		4.24	□□□□□ -1.73
SUP35	YDR172W	PMT6	P42934	759 aa		4.24	□□□□□ -1.73
SUP35	YDR172W	YLR456W	Q06199	204 aa		4.24	□□□□□ -1.73
SUP35	YDR172W	BBP1	Q12365	385 aa		4.24	□□□□□ -1.73
SUP35	YDR172W	YSF3	P0C074	85 aa	Predicted RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	STE12	P13574	688 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	NCP1	P16603	691 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	RPB8	P20436	146 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	ATS1	P31386	333 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	ERG24	P32462	438 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	PAU2	P32612	120 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	VPS17	P32913	551 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	AFR1	P33304	620 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	MTH1	P35198	433 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	AIM3	P38266	947 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	NSG1	P38837	291 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	CAT5	P41735	233 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	DPB11	P47027	764 aa	Predicted RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	LYS20	P48570	428 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	SEH1	P53011	349 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	YGR067C	P53243	804 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	OGG1	P53397	376 aa	Predicted RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	SNP1	Q00916	300 aa	Predicted RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	RPL6A	Q02326	176 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	AIM6	Q07716	390 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
SUP35	YDR172W	YDL109C	Q12103	647 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	LYS21	Q12122	440 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	INP53	Q12271	1107 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	MTR10	Q99189	972 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	BRR2	P32639	2163 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	MRP1	P10662	321 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	PDA1	P16387	420 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	HSP150	P32478	413 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	CHK1	P38147	527 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	TCM62	P38228	572 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	IFA38	P38286	347 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	MTC4	P38335	694 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	YHR122W	P38829	231 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	RTT105	P40063	208 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	YGR210C	P42942	411 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	SNO3	P43544	222 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	MDE1	P47095	244 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	NRM1	P53718	249 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	MRPL50	P53724	139 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	BUD25	P85052	153 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	NUP116	Q02630	1113 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	SRP1	Q02821	542 aa	Known RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	EKI1	Q03764	534 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms