RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W YOX1P34161 385 aa3.59□□□□□ -1.83
HPR1YDR138W AIM29P36154 155 aa3.59□□□□□ -1.83
HPR1YDR138W LDB7P38210 180 aa3.59□□□□□ -1.83
HPR1YDR138W RPS14BP39516 138 aaKnown RBP3.59□□□□□ -1.83
HPR1YDR138W YAT2P40017 923 aa3.59□□□□□ -1.83
HPR1YDR138W XBP1P40489 647 aa3.59□□□□□ -1.83
HPR1YDR138W YGL159WP53110 370 aa3.59□□□□□ -1.83
HPR1YDR138W YGL082WP53155 381 aa3.59□□□□□ -1.83
HPR1YDR138W MTM1P53320 366 aa3.59□□□□□ -1.83
HPR1YDR138W TRM112P53738 135 aaPredicted RBP3.59□□□□□ -1.83
HPR1YDR138W RNY1Q02933 434 aaKnown RBP3.59□□□□□ -1.83
HPR1YDR138W AI5_BETAQ9ZZX0 354 aa3.59□□□□□ -1.83
HPR1YDR138W RHO1P06780 209 aaKnown RBP3.59□□□□□ -1.84
HPR1YDR138W RPL4AP10664 362 aaKnown RBP3.59□□□□□ -1.84
HPR1YDR138W RPO26P20435 155 aa3.59□□□□□ -1.84
HPR1YDR138W PBN1P25580 416 aa3.59□□□□□ -1.84
HPR1YDR138W ATO2P32907 282 aa3.59□□□□□ -1.84
HPR1YDR138W AVT5P38176 459 aa3.59□□□□□ -1.84
HPR1YDR138W RPH1P39956 796 aa3.59□□□□□ -1.84
HPR1YDR138W PSA1P41940 361 aaKnown RBP3.59□□□□□ -1.84
HPR1YDR138W LCB3P47013 409 aa3.59□□□□□ -1.84
HPR1YDR138W YJR054WP47114 497 aa3.59□□□□□ -1.84
HPR1YDR138W RPL4BP49626 362 aaKnown RBP3.59□□□□□ -1.84
HPR1YDR138W NBP35P52920 328 aa3.59□□□□□ -1.84
HPR1YDR138W PRP38Q00723 242 aaPredicted RBP3.59□□□□□ -1.84
HPR1YDR138W OST6Q03723 332 aa3.59□□□□□ -1.84
HPR1YDR138W ERP1Q05359 219 aaKnown RBP3.59□□□□□ -1.84
HPR1YDR138W BER1Q06688 274 aaKnown RBP3.59□□□□□ -1.84
HPR1YDR138W PAM18Q07914 168 aa3.59□□□□□ -1.84
HPR1YDR138W RFU1Q08003 200 aa3.59□□□□□ -1.84
HPR1YDR138W TAF10Q12030 206 aa3.59□□□□□ -1.84
HPR1YDR138W MDS3P53094 1487 aa3.58□□□□□ -1.84
HPR1YDR138W RPL20AP0CX23 172 aaKnown RBP3.58□□□□□ -1.84
HPR1YDR138W RPL20BP0CX24 172 aaPredicted RBP3.58□□□□□ -1.84
HPR1YDR138W REV1P12689 985 aa3.58□□□□□ -1.84
HPR1YDR138W ATR1P13090 542 aa3.58□□□□□ -1.84
HPR1YDR138W IFM1P25038 676 aa3.58□□□□□ -1.84
HPR1YDR138W CAM1P29547 415 aaKnown RBP3.58□□□□□ -1.84
HPR1YDR138W SUI1P32911 108 aaKnown RBP3.58□□□□□ -1.84
HPR1YDR138W CLG1P35190 452 aa3.58□□□□□ -1.84
HPR1YDR138W CYC2P38909 366 aa3.58□□□□□ -1.84
HPR1YDR138W YKE4P40544 346 aa3.58□□□□□ -1.84
HPR1YDR138W COS4P43542 379 aa3.58□□□□□ -1.84
HPR1YDR138W MRM2P53123 320 aa3.58□□□□□ -1.84
HPR1YDR138W CDH1P53197 566 aa3.58□□□□□ -1.84
HPR1YDR138W CAF40P53829 373 aa3.58□□□□□ -1.84
HPR1YDR138W SUR7P54003 302 aa3.58□□□□□ -1.84
HPR1YDR138W TRM82Q03774 444 aa3.58□□□□□ -1.84
HPR1YDR138W YHC1Q05900 231 aaKnown RBP3.58□□□□□ -1.84
HPR1YDR138W TAZ1Q06510 381 aa3.58□□□□□ -1.84
HPR1YDR138W YLR012CQ07927 99 aa3.58□□□□□ -1.84
HPR1YDR138W YLR053CQ12026 108 aa3.58□□□□□ -1.84
HPR1YDR138W FYV7Q12247 151 aa3.58□□□□□ -1.84
HPR1YDR138W Q0144Q9ZZW2 109 aa3.58□□□□□ -1.84
HPR1YDR138W DRS2P39524 1355 aa3.58□□□□□ -1.84
HPR1YDR138W IPP1P00817 287 aaKnown RBP3.58□□□□□ -1.84
HPR1YDR138W GPA2P10823 449 aa3.58□□□□□ -1.84
HPR1YDR138W SPS100P13130 326 aa3.58□□□□□ -1.84
HPR1YDR138W NSP1P14907 823 aaKnown RBP3.58□□□□□ -1.84
HPR1YDR138W COQ1P18900 473 aa3.58□□□□□ -1.84
HPR1YDR138W ZRC1P20107 442 aa3.58□□□□□ -1.84
HPR1YDR138W YKL187CP34231 750 aa3.58□□□□□ -1.84
HPR1YDR138W AST1P35183 429 aa3.58□□□□□ -1.84
HPR1YDR138W SWD2P36104 329 aaPredicted RBP3.58□□□□□ -1.84
HPR1YDR138W HEK2P38199 381 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
HPR1YDR138W MTC6P38849 526 aa3.58□□□□□ -1.84
HPR1YDR138W AIM2P39721 246 aa3.58□□□□□ -1.84
HPR1YDR138W SHY1P53266 389 aa3.58□□□□□ -1.84
HPR1YDR138W WSC2P53832 503 aa3.58□□□□□ -1.84
HPR1YDR138W CWC27Q02770 301 aa3.58□□□□□ -1.84
HPR1YDR138W LOA1Q06508 300 aa3.58□□□□□ -1.84
HPR1YDR138W SFM1Q12314 213 aa3.58□□□□□ -1.84
HPR1YDR138W SNU23Q12368 194 aaPredicted RBP3.58□□□□□ -1.84
HPR1YDR138W RNA15P25299 296 aaPredicted RBP3.57□□□□□ -1.84
HPR1YDR138W ZRT1P32804 376 aa3.57□□□□□ -1.84
HPR1YDR138W YIL169CP40442 995 aa3.57□□□□□ -1.84
HPR1YDR138W YKR005CQ02203 525 aa3.57□□□□□ -1.84
HPR1YDR138W SCS7Q03529 384 aa3.57□□□□□ -1.84
HPR1YDR138W YMR226CQ05016 267 aaKnown RBP3.57□□□□□ -1.84
HPR1YDR138W CDC123Q05791 360 aa3.57□□□□□ -1.84
HPR1YDR138W YPR127WQ06494 345 aa3.57□□□□□ -1.84
HPR1YDR138W CDD1Q06549 142 aa3.57□□□□□ -1.84
HPR1YDR138W ASR1Q06834 288 aa3.57□□□□□ -1.84
HPR1YDR138W SLF1Q12034 447 aaKnown RBP3.57□□□□□ -1.84
HPR1YDR138W TMS1Q12116 473 aa3.57□□□□□ -1.84
HPR1YDR138W TY1B-DR4Q07793 1604 aa3.57□□□□□ -1.84
HPR1YDR138W QCR2P07257 368 aa3.56□□□□□ -1.84
HPR1YDR138W RPL27AP0C2H6 136 aaKnown RBP3.56□□□□□ -1.84
HPR1YDR138W RPL27BP0C2H7 136 aaKnown RBP3.56□□□□□ -1.84
HPR1YDR138W RPS8AP0CX39 200 aaKnown RBP3.56□□□□□ -1.84
HPR1YDR138W RPS8BP0CX40 200 aaKnown RBP3.56□□□□□ -1.84
HPR1YDR138W EHD3P28817 500 aa3.56□□□□□ -1.84
HPR1YDR138W MCH2P36032 473 aa3.56□□□□□ -1.84
HPR1YDR138W NAT2P37293 288 aa3.56□□□□□ -1.84
HPR1YDR138W YBP1P38315 674 aa3.56□□□□□ -1.84
HPR1YDR138W PFS1P38872 237 aa3.56□□□□□ -1.84
HPR1YDR138W NPT1P39683 429 aaKnown RBP3.56□□□□□ -1.84
HPR1YDR138W DDI1P40087 428 aa3.56□□□□□ -1.84
HPR1YDR138W YFH7P43591 353 aa3.56□□□□□ -1.84
HPR1YDR138W YJR085CP47131 105 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms