RNA–Protein interactions for RNA: YDR014W

RAD61, Transcript of Subunit of a complex that inhibits sister chromatid cohesion, yeast

Gene RAD61, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD61	YDR014W	SMC6	Q12749	1114 aa		0.2	□□□□□ -2.38
RAD61	YDR014W	RPL6B	P05739	176 aa	Known RBP	0.19	□□□□□ -2.38
RAD61	YDR014W	UBA1	P22515	1024 aa	Known RBP	0.19	□□□□□ -2.38
RAD61	YDR014W	CAJ1	P39101	391 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	RPE1	P46969	238 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	YGR016W	P53209	190 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	RPL6A	Q02326	176 aa	Known RBP	0.19	□□□□□ -2.38
RAD61	YDR014W	YLL053C	P0CD98	152 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	YGL010W	P25338	174 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	RDS1	P25611	832 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	GDT1	P38301	280 aa	Predicted RBP	0.19	□□□□□ -2.38
RAD61	YDR014W	VAB2	P40003	282 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	YJL055W	P47044	245 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	VPS9	P54787	451 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	SNX41	Q04053	625 aa		0.19	□□□□□ -2.38
RAD61	YDR014W	YMR114C	Q04471	368 aa	Known RBP	0.19	□□□□□ -2.38
RAD61	YDR014W	MDL1	P33310	695 aa		0.18	□□□□□ -2.38
RAD61	YDR014W	SPT8	P38915	602 aa		0.18	□□□□□ -2.38
RAD61	YDR014W	YNL143C	P53908	130 aa		0.18	□□□□□ -2.38
RAD61	YDR014W	YBL112C	Q3E7Y4	105 aa		0.18	□□□□□ -2.38
RAD61	YDR014W	VMA5	P31412	392 aa	Known RBP	0.17	□□□□□ -2.38
RAD61	YDR014W	YBR220C	P38318	560 aa		0.17	□□□□□ -2.38
RAD61	YDR014W	YFL040W	P43562	540 aa		0.17	□□□□□ -2.38
RAD61	YDR014W	UTP23	Q12339	254 aa	Known RBP	0.17	□□□□□ -2.38
RAD61	YDR014W	DCN1	Q12395	269 aa		0.17	□□□□□ -2.38
RAD61	YDR014W	FPR1	P20081	114 aa	Known RBP	0.17	□□□□□ -2.38
RAD61	YDR014W	BMH1	P29311	267 aa	Known RBP	0.17	□□□□□ -2.38
RAD61	YDR014W	MCH2	P36032	473 aa		0.17	□□□□□ -2.38
RAD61	YDR014W	YML6	P51998	286 aa		0.17	□□□□□ -2.38
RAD61	YDR014W	ECM18	Q04623	453 aa		0.17	□□□□□ -2.38
RAD61	YDR014W	TFB5	Q3E7C1	72 aa	Predicted RBP	0.17	□□□□□ -2.38
RAD61	YDR014W	RAS2	P01120	322 aa	Known RBP	0.16	□□□□□ -2.38
RAD61	YDR014W	PXA2	P34230	853 aa		0.16	□□□□□ -2.38
RAD61	YDR014W	IRC4	Q03036	179 aa		0.16	□□□□□ -2.38
RAD61	YDR014W	RVB1	Q03940	463 aa	Known RBP	0.16	□□□□□ -2.38
RAD61	YDR014W	BUR2	Q05949	395 aa		0.16	□□□□□ -2.38
RAD61	YDR014W	PHO89	P38361	574 aa		0.15	□□□□□ -2.39
RAD61	YDR014W	SNX4	P47057	423 aa		0.15	□□□□□ -2.39
RAD61	YDR014W	RPL37A	P49166	88 aa	Known RBP	0.15	□□□□□ -2.39
RAD61	YDR014W	AAH1	P53909	347 aa		0.15	□□□□□ -2.39
RAD61	YDR014W	YPL039W	Q03080	316 aa		0.15	□□□□□ -2.39
RAD61	YDR014W	PEX12	Q04370	399 aa		0.15	□□□□□ -2.39
RAD61	YDR014W	VPH1	P32563	840 aa	Known RBP	0.15	□□□□□ -2.39
RAD61	YDR014W	IMP3	P32899	183 aa	Predicted RBP	0.15	□□□□□ -2.39
RAD61	YDR014W	YHR035W	P38769	630 aa		0.15	□□□□□ -2.39
RAD61	YDR014W	ALP1	P38971	573 aa		0.15	□□□□□ -2.39
RAD61	YDR014W	YHB1	P39676	399 aa	Known RBP	0.15	□□□□□ -2.39
RAD61	YDR014W	PRP39	P39682	629 aa	Known RBP	0.15	□□□□□ -2.39
RAD61	YDR014W	AVT7	P40501	490 aa		0.15	□□□□□ -2.39
RAD61	YDR014W	RPA34	P47006	233 aa	Predicted RBP	0.15	□□□□□ -2.39
RAD61	YDR014W	ERG2	P32352	222 aa		0.14	□□□□□ -2.39
RAD61	YDR014W	SHQ1	P40486	507 aa	Predicted RBP	0.14	□□□□□ -2.39
RAD61	YDR014W	YPT32	P51996	222 aa	Known RBP	0.14	□□□□□ -2.39
RAD61	YDR014W	MNE1	P24720	663 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	COT1	P32798	439 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	DRE2	P36152	348 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	YSW1	P38280	609 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	PRM15	Q03262	622 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	PAR32	Q12515	295 aa	Known RBP	0.13	□□□□□ -2.39
RAD61	YDR014W	FBA1	P14540	359 aa	Known RBP	0.13	□□□□□ -2.39
RAD61	YDR014W	MDH2	P22133	377 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	AEP1	P32493	518 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	KDX1	P36005	433 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	POP8	P38208	133 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	YHI9	P38765	294 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	GDI1	P39958	451 aa	Known RBP	0.13	□□□□□ -2.39
RAD61	YDR014W	RPL37B	P51402	88 aa	Known RBP	0.13	□□□□□ -2.39
RAD61	YDR014W	UBC13	P52490	153 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	MHT1	Q12525	324 aa		0.13	□□□□□ -2.39
RAD61	YDR014W	RPL2A	P0CX45	254 aa	Known RBP	0.12	□□□□□ -2.39
RAD61	YDR014W	RPL2B	P0CX46	254 aa	Known RBP	0.12	□□□□□ -2.39
RAD61	YDR014W	POX1	P13711	748 aa		0.12	□□□□□ -2.39
RAD61	YDR014W	CCA1	P21269	546 aa		0.12	□□□□□ -2.39
RAD61	YDR014W	YPC1	P38298	316 aa		0.12	□□□□□ -2.39
RAD61	YDR014W	SHC1	P39000	512 aa		0.12	□□□□□ -2.39
RAD61	YDR014W	SCL1	P21243	252 aa	Known RBP	0.11	□□□□□ -2.39
RAD61	YDR014W	DPB2	P24482	689 aa	Predicted RBP	0.11	□□□□□ -2.39
RAD61	YDR014W	GDH2	P33327	1092 aa	Known RBP	0.11	□□□□□ -2.39
RAD61	YDR014W	YBR219C	P38317	127 aa		0.11	□□□□□ -2.39
RAD61	YDR014W	SEN34	P39707	275 aa		0.11	□□□□□ -2.39
RAD61	YDR014W	TAD2	P47058	250 aa		0.11	□□□□□ -2.39
RAD61	YDR014W	SXM1	Q04175	944 aa	Known RBP	0.11	□□□□□ -2.39
RAD61	YDR014W	SMT3	Q12306	101 aa	Known RBP	0.11	□□□□□ -2.39
RAD61	YDR014W	SPO24	Q3E752	67 aa		0.11	□□□□□ -2.39
RAD61	YDR014W	ZRT1	P32804	376 aa		0.11	□□□□□ -2.39
RAD61	YDR014W	CSG2	P35206	410 aa		0.11	□□□□□ -2.39
RAD61	YDR014W	CSI2	Q08054	341 aa		0.11	□□□□□ -2.39
RAD61	YDR014W	SAS5	Q99314	248 aa		0.11	□□□□□ -2.39
RAD61	YDR014W	VTC1	P40046	129 aa	RIP-Chip data	0.1	□□□□□ -2.39	not detected
RAD61	YDR014W	BMT5	P40493	336 aa		0.1	□□□□□ -2.39
RAD61	YDR014W	SWC4	P53201	476 aa		0.1	□□□□□ -2.39
RAD61	YDR014W	YDR262W	Q12331	272 aa		0.1	□□□□□ -2.39
RAD61	YDR014W	VAR1	P02381	398 aa		0.09	□□□□□ -2.39
RAD61	YDR014W	STE3	P06783	470 aa		0.09	□□□□□ -2.39
RAD61	YDR014W	PPH21	P23594	369 aa		0.09	□□□□□ -2.39
RAD61	YDR014W	YNL146W	P53906	100 aa		0.09	□□□□□ -2.39
RAD61	YDR014W	VMA8	P32610	256 aa	Known RBP	0.09	□□□□□ -2.4
RAD61	YDR014W	HUA1	P40325	198 aa		0.09	□□□□□ -2.4
RAD61	YDR014W	YGR168C	P53293	376 aa		0.09	□□□□□ -2.4
RAD61	YDR014W	GEP5	Q12393	293 aa		0.09	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms