RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C GIT1P25346 518 aa4.56□□□□□ -1.68
SCM3YDL139C RAD51P25454 400 aa4.56□□□□□ -1.68
SCM3YDL139C PBN1P25580 416 aa4.56□□□□□ -1.68
SCM3YDL139C AGA2P32781 87 aa4.56□□□□□ -1.68
SCM3YDL139C PDR3P33200 976 aa4.56□□□□□ -1.68
SCM3YDL139C NUF2P33895 451 aa4.56□□□□□ -1.68
SCM3YDL139C SEF1P34228 1148 aa4.56□□□□□ -1.68
SCM3YDL139C TRR2P38816 342 aa4.56□□□□□ -1.68
SCM3YDL139C ALB1P47019 175 aaPredicted RBP4.56□□□□□ -1.68
SCM3YDL139C BUD25P85052 153 aa4.56□□□□□ -1.68
SCM3YDL139C YKR005CQ02203 525 aa4.56□□□□□ -1.68
SCM3YDL139C SMA2Q04658 369 aa4.56□□□□□ -1.68
SCM3YDL139C GAL83Q04739 417 aa4.56□□□□□ -1.68
SCM3YDL139C RBS1Q05672 457 aaKnown RBP4.56□□□□□ -1.68
SCM3YDL139C HEM25Q07534 307 aa4.56□□□□□ -1.68
SCM3YDL139C RRG7Q08774 242 aaPredicted RBP4.56□□□□□ -1.68
SCM3YDL139C FDH1Q08911 376 aa4.56□□□□□ -1.68
SCM3YDL139C LEU9Q12166 604 aaKnown RBP4.56□□□□□ -1.68
SCM3YDL139C COX17Q12287 69 aa4.56□□□□□ -1.68
SCM3YDL139C DCP1Q12517 231 aaPredicted RBP4.56□□□□□ -1.68
SCM3YDL139C YDL007C-AQ2V2Q0 85 aa4.56□□□□□ -1.68
SCM3YDL139C LAG2Q92325 660 aa4.56□□□□□ -1.68
SCM3YDL139C PHO80P20052 293 aa4.55□□□□□ -1.68
SCM3YDL139C IDP1P21954 428 aaKnown RBP4.55□□□□□ -1.68
SCM3YDL139C CMK1P27466 446 aaKnown RBP4.55□□□□□ -1.68
SCM3YDL139C PPA2P28239 310 aa4.55□□□□□ -1.68
SCM3YDL139C PPZ2P33329 710 aa4.55□□□□□ -1.68
SCM3YDL139C SLC1P33333 303 aa4.55□□□□□ -1.68
SCM3YDL139C MRPL36P36531 177 aa4.55□□□□□ -1.68
SCM3YDL139C THI2P38141 450 aa4.55□□□□□ -1.68
SCM3YDL139C LNP1P38878 278 aa4.55□□□□□ -1.68
SCM3YDL139C CHL4P38907 458 aa4.55□□□□□ -1.68
SCM3YDL139C FMC1P40491 155 aa4.55□□□□□ -1.68
SCM3YDL139C CIN2P46670 268 aa4.55□□□□□ -1.68
SCM3YDL139C HOC1P47124 396 aa4.55□□□□□ -1.68
SCM3YDL139C LYS20P48570 428 aaKnown RBP4.55□□□□□ -1.68
SCM3YDL139C FMP48P53233 369 aa4.55□□□□□ -1.68
SCM3YDL139C SAY1P53324 424 aa4.55□□□□□ -1.68
SCM3YDL139C PAL1Q05518 499 aaKnown RBP4.55□□□□□ -1.68
SCM3YDL139C YLR030WQ07967 263 aa4.55□□□□□ -1.68
SCM3YDL139C BRX1Q08235 291 aaKnown RBP4.55□□□□□ -1.68
SCM3YDL139C UIP4Q08926 304 aa4.55□□□□□ -1.68
SCM3YDL139C YPL272CQ08984 517 aa4.55□□□□□ -1.68
SCM3YDL139C LYS21Q12122 440 aaKnown RBP4.55□□□□□ -1.68
SCM3YDL139C MED2Q12124 431 aa4.55□□□□□ -1.68
SCM3YDL139C YRA1Q12159 226 aaKnown RBP4.55□□□□□ -1.68
SCM3YDL139C MSH5Q12175 901 aa4.55□□□□□ -1.68
SCM3YDL139C TPO4Q12256 659 aa4.55□□□□□ -1.68
SCM3YDL139C SFM1Q12314 213 aa4.55□□□□□ -1.68
SCM3YDL139C MDM35O60200 86 aa4.54□□□□□ -1.68
SCM3YDL139C RPS18AP0CX55 146 aaKnown RBP4.54□□□□□ -1.68
SCM3YDL139C RPS18BP0CX56 146 aaPredicted RBP4.54□□□□□ -1.68
SCM3YDL139C MCM10P32354 571 aa4.54□□□□□ -1.68
SCM3YDL139C SPT14P32363 452 aa4.54□□□□□ -1.68
SCM3YDL139C ECM15P35195 104 aa4.54□□□□□ -1.68
SCM3YDL139C FET3P38993 636 aa4.54□□□□□ -1.68
SCM3YDL139C JLP2P40206 208 aa4.54□□□□□ -1.68
SCM3YDL139C ICE2P40499 491 aa4.54□□□□□ -1.68
SCM3YDL139C YFL015CP43578 164 aa4.54□□□□□ -1.68
SCM3YDL139C SFH5P47008 294 aa4.54□□□□□ -1.68
SCM3YDL139C SEH1P53011 349 aaKnown RBP4.54□□□□□ -1.68
SCM3YDL139C BRR6P53062 197 aa4.54□□□□□ -1.68
SCM3YDL139C YGL235WP53071 178 aa4.54□□□□□ -1.68
SCM3YDL139C NCE101Q02820 53 aa4.54□□□□□ -1.68
SCM3YDL139C FIN1Q03898 291 aa4.54□□□□□ -1.68
SCM3YDL139C BNA5Q05979 453 aa4.54□□□□□ -1.68
SCM3YDL139C YOR365CQ08844 703 aa4.54□□□□□ -1.68
SCM3YDL139C ATG41Q12048 136 aa4.54□□□□□ -1.68
SCM3YDL139C SKM1Q12469 655 aa4.54□□□□□ -1.68
SCM3YDL139C PSF1Q12488 208 aa4.54□□□□□ -1.68
SCM3YDL139C DET1Q99288 334 aaKnown RBP4.54□□□□□ -1.68
SCM3YDL139C RPL7AP05737 244 aaKnown RBP4.53□□□□□ -1.68
SCM3YDL139C SIR2P06700 562 aa4.53□□□□□ -1.68
SCM3YDL139C SGA1P08019 549 aa4.53□□□□□ -1.68
SCM3YDL139C YSF3P0C074 85 aaPredicted RBP4.53□□□□□ -1.68
SCM3YDL139C DBP3P20447 523 aaKnown RBP4.53□□□□□ -1.68
SCM3YDL139C BOS1P25385 244 aa4.53□□□□□ -1.68
SCM3YDL139C ATG22P25568 528 aa4.53□□□□□ -1.68
SCM3YDL139C YCR102CP25608 368 aa4.53□□□□□ -1.68
SCM3YDL139C HSP30P25619 332 aa4.53□□□□□ -1.68
SCM3YDL139C MDH3P32419 343 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
SCM3YDL139C SRL3P36167 246 aa4.53□□□□□ -1.68
SCM3YDL139C MAL32P38158 584 aa4.53□□□□□ -1.68
SCM3YDL139C YBR137WP38276 179 aa4.53□□□□□ -1.68
SCM3YDL139C PEX32P38292 413 aa4.53□□□□□ -1.68
SCM3YDL139C PRP39P39682 629 aaKnown RBP4.53□□□□□ -1.68
SCM3YDL139C YKE4P40544 346 aa4.53□□□□□ -1.68
SCM3YDL139C PFS2P42841 465 aaKnown RBP4.53□□□□□ -1.68
SCM3YDL139C DIE2P50076 525 aa4.53□□□□□ -1.68
SCM3YDL139C RMD9P53140 646 aaKnown RBP4.53□□□□□ -1.68
SCM3YDL139C LSG1P53145 640 aaKnown RBP4.53□□□□□ -1.68
SCM3YDL139C LCL3P53153 274 aa4.53□□□□□ -1.68
SCM3YDL139C NQM1P53228 333 aaPredicted RBP4.53□□□□□ -1.68
SCM3YDL139C ERV29P53337 310 aa4.53□□□□□ -1.68
SCM3YDL139C MAL12P53341 584 aa4.53□□□□□ -1.68
SCM3YDL139C YAT1P80235 687 aa4.53□□□□□ -1.68
SCM3YDL139C YSA1Q01976 231 aa4.53□□□□□ -1.68
SCM3YDL139C YPR091CQ06833 770 aa4.53□□□□□ -1.68
SCM3YDL139C YOR289WQ12012 251 aaPredicted RBP4.53□□□□□ -1.68
SCM3YDL139C RPL7BQ12213 244 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms