RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C RNA14P25298 677 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C BOS1P25385 244 aa1.91□□□□□ -2.1
BRE1YDL074C SBA1P28707 216 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C YBR096WP38256 230 aa1.91□□□□□ -2.1
BRE1YDL074C LAG1P38703 411 aa1.91□□□□□ -2.1
BRE1YDL074C COS8P38723 381 aa1.91□□□□□ -2.1
BRE1YDL074C RRP4P38792 359 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C ANS1P38832 159 aa1.91□□□□□ -2.1
BRE1YDL074C YHR180WP38868 163 aa1.91□□□□□ -2.1
BRE1YDL074C VMA7P39111 118 aa1.91□□□□□ -2.1
BRE1YDL074C PTI1P39927 425 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C PHM8P40025 321 aa1.91□□□□□ -2.1
BRE1YDL074C VRG4P40107 337 aa1.91□□□□□ -2.1
BRE1YDL074C SLZ1P40167 298 aa1.91□□□□□ -2.1
BRE1YDL074C UTP25P40498 721 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C AVT7P40501 490 aa1.91□□□□□ -2.1
BRE1YDL074C QRI7P43122 407 aa1.91□□□□□ -2.1
BRE1YDL074C BPL1P48445 690 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C TOS2P50078 622 aa1.91□□□□□ -2.1
BRE1YDL074C PHB2P50085 310 aa1.91□□□□□ -2.1
BRE1YDL074C DOC1P53068 250 aa1.91□□□□□ -2.1
BRE1YDL074C TPC1P53257 314 aa1.91□□□□□ -2.1
BRE1YDL074C SYF2P53277 215 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C FHN1P53279 174 aa1.91□□□□□ -2.1
BRE1YDL074C MAL12P53341 584 aa1.91□□□□□ -2.1
BRE1YDL074C MPP6P53725 186 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C NRK1P53915 240 aa1.91□□□□□ -2.1
BRE1YDL074C ASI3P53983 676 aa1.91□□□□□ -2.1
BRE1YDL074C YLR152CP54072 576 aa1.91□□□□□ -2.1
BRE1YDL074C YML108WQ03759 105 aa1.91□□□□□ -2.1
BRE1YDL074C SNX41Q04053 625 aa1.91□□□□□ -2.1
BRE1YDL074C MRX8Q05473 314 aa1.91□□□□□ -2.1
BRE1YDL074C NNT1Q05874 261 aa1.91□□□□□ -2.1
BRE1YDL074C TAZ1Q06510 381 aa1.91□□□□□ -2.1
BRE1YDL074C CYK3Q07533 885 aa1.91□□□□□ -2.1
BRE1YDL074C RAX1Q08760 435 aa1.91□□□□□ -2.1
BRE1YDL074C GUP2Q08929 609 aa1.91□□□□□ -2.1
BRE1YDL074C SRL2Q12020 392 aa1.91□□□□□ -2.1
BRE1YDL074C RLM1Q12224 676 aa1.91□□□□□ -2.1
BRE1YDL074C YDR215CQ12240 137 aa1.91□□□□□ -2.1
BRE1YDL074C BBP1Q12365 385 aa1.91□□□□□ -2.1
BRE1YDL074C YOR032W-AQ8TGS1 66 aa1.91□□□□□ -2.1
BRE1YDL074C FAS1P07149 2051 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C CDC9P04819 755 aa1.91□□□□□ -2.1
BRE1YDL074C PHO4P07270 312 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C CHO1P08456 276 aa1.91□□□□□ -2.1
BRE1YDL074C RPL20AP0CX23 172 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C RPL20BP0CX24 172 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C ARF1P11076 181 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C YPK2P18961 677 aa1.91□□□□□ -2.1
BRE1YDL074C GPI12P23797 304 aa1.91□□□□□ -2.1
BRE1YDL074C RNQ1P25367 405 aa1.91□□□□□ -2.1
BRE1YDL074C YCL002CP25565 263 aa1.91□□□□□ -2.1
BRE1YDL074C YCR100CP25606 316 aa1.91□□□□□ -2.1
BRE1YDL074C RFA3P26755 122 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C MRP17P28778 131 aa1.91□□□□□ -2.1
BRE1YDL074C EHD3P28817 500 aa1.91□□□□□ -2.1
BRE1YDL074C PRE2P30656 287 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C ATS1P31386 333 aa1.91□□□□□ -2.1
BRE1YDL074C ACH1P32316 526 aa1.91□□□□□ -2.1
BRE1YDL074C MDH3P32419 343 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
BRE1YDL074C RPC34P32910 317 aa1.91□□□□□ -2.1
BRE1YDL074C PEX32P38292 413 aa1.91□□□□□ -2.1
BRE1YDL074C HTD2P38790 280 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C AIM46P38885 310 aa1.91□□□□□ -2.1
BRE1YDL074C SIT1P39980 628 aa1.91□□□□□ -2.1
BRE1YDL074C DLS1P40366 167 aa1.91□□□□□ -2.1
BRE1YDL074C YIL086CP40503 102 aa1.91□□□□□ -2.1
BRE1YDL074C BAP3P41815 604 aa1.91□□□□□ -2.1
BRE1YDL074C SLS1P42900 643 aa1.91□□□□□ -2.1
BRE1YDL074C CIS3P47001 227 aa1.91□□□□□ -2.1
BRE1YDL074C UBX6P47049 396 aa1.91□□□□□ -2.1
BRE1YDL074C SRB7P47822 140 aa1.91□□□□□ -2.1
BRE1YDL074C TRM9P49957 279 aa1.91□□□□□ -2.1
BRE1YDL074C PPT1P53043 513 aa1.91□□□□□ -2.1
BRE1YDL074C GTF1P53260 183 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C RSM27P53305 110 aa1.91□□□□□ -2.1
BRE1YDL074C SCW4P53334 386 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C SUN4P53616 420 aa1.91□□□□□ -2.1
BRE1YDL074C CWC24P53769 259 aa1.91□□□□□ -2.1
BRE1YDL074C SAM50P53969 484 aa1.91□□□□□ -2.1
BRE1YDL074C SMX3P54999 86 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C DID2P69771 204 aa1.91□□□□□ -2.1
BRE1YDL074C RPL6AQ02326 176 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C YPL039WQ03080 316 aa1.91□□□□□ -2.1
BRE1YDL074C PLB2Q03674 706 aa1.91□□□□□ -2.1
BRE1YDL074C MSS11Q03825 758 aa1.91□□□□□ -2.1
BRE1YDL074C UTP15Q04305 513 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C HNT1Q04344 158 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C STP3Q05937 343 aa1.91□□□□□ -2.1
BRE1YDL074C MRPL35Q06678 367 aa1.91□□□□□ -2.1
BRE1YDL074C RSC58Q07979 502 aa1.91□□□□□ -2.1
BRE1YDL074C BSC6Q08280 497 aa1.91□□□□□ -2.1
BRE1YDL074C SYC1Q08553 188 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C ATG41Q12048 136 aa1.91□□□□□ -2.1
BRE1YDL074C TIR4Q12218 487 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C TFB5Q3E7C1 72 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C CYR1P08678 2026 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C YBR085C-AO43137 85 aa1.9□□□□□ -2.1
BRE1YDL074C RPP1AP05318 106 aaPredicted RBP1.9□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms