RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B KRE6P32486 720 aa0.39□□□□□ -2.35
HTL1YCR020W-B ZRT1P32804 376 aa0.39□□□□□ -2.35
HTL1YCR020W-B YDR089WP38966 869 aa0.39□□□□□ -2.35
HTL1YCR020W-B AVT7P40501 490 aa0.39□□□□□ -2.35
HTL1YCR020W-B SEC28P40509 296 aaKnown RBP0.39□□□□□ -2.35
HTL1YCR020W-B YFL040WP43562 540 aa0.39□□□□□ -2.35
HTL1YCR020W-B YJL016WP47072 561 aa0.39□□□□□ -2.35
HTL1YCR020W-B YGR168CP53293 376 aa0.39□□□□□ -2.35
HTL1YCR020W-B CAB4P53332 305 aa0.39□□□□□ -2.35
HTL1YCR020W-B ISD11Q6Q560 94 aa0.39□□□□□ -2.35
HTL1YCR020W-B SGA1P08019 549 aa0.38□□□□□ -2.35
HTL1YCR020W-B TOM40P23644 387 aaKnown RBP0.38□□□□□ -2.35
HTL1YCR020W-B PHO89P38361 574 aa0.38□□□□□ -2.35
HTL1YCR020W-B LRP1P38801 184 aaKnown RBP0.38□□□□□ -2.35
HTL1YCR020W-B VAB2P40003 282 aa0.38□□□□□ -2.35
HTL1YCR020W-B YJL118WP47022 219 aa0.38□□□□□ -2.35
HTL1YCR020W-B YGL114WP53134 725 aa0.38□□□□□ -2.35
HTL1YCR020W-B ATG15P25641 520 aa0.37□□□□□ -2.35
HTL1YCR020W-B COT1P32798 439 aa0.37□□□□□ -2.35
HTL1YCR020W-B MCH2P36032 473 aa0.37□□□□□ -2.35
HTL1YCR020W-B YKR045CP36138 183 aa0.37□□□□□ -2.35
HTL1YCR020W-B YPC1P38298 316 aa0.37□□□□□ -2.35
HTL1YCR020W-B YHR035WP38769 630 aa0.37□□□□□ -2.35
HTL1YCR020W-B DSE2P38844 325 aa0.37□□□□□ -2.35
HTL1YCR020W-B SEN34P39707 275 aa0.37□□□□□ -2.35
HTL1YCR020W-B YPL039WQ03080 316 aa0.37□□□□□ -2.35
HTL1YCR020W-B YMR114CQ04471 368 aaKnown RBP0.37□□□□□ -2.35
HTL1YCR020W-B CAT2P32796 670 aaKnown RBP0.36□□□□□ -2.35
HTL1YCR020W-B IMP3P32899 183 aaPredicted RBP0.36□□□□□ -2.35
HTL1YCR020W-B DAD2P36162 133 aa0.36□□□□□ -2.35
HTL1YCR020W-B NUP49Q02199 472 aa0.36□□□□□ -2.35
HTL1YCR020W-B CAB5Q03941 241 aa0.36□□□□□ -2.35
HTL1YCR020W-B YBL112CQ3E7Y4 105 aa0.36□□□□□ -2.35
HTL1YCR020W-B UBR2Q07963 1872 aa0.35□□□□□ -2.35
HTL1YCR020W-B CDC7P06243 507 aa0.35□□□□□ -2.35
HTL1YCR020W-B RAD7P06779 565 aa0.35□□□□□ -2.35
HTL1YCR020W-B VPH1P32563 840 aaKnown RBP0.35□□□□□ -2.35
HTL1YCR020W-B ADH5P38113 351 aaKnown RBP0.35□□□□□ -2.35
HTL1YCR020W-B PEP8P40335 379 aa0.35□□□□□ -2.35
HTL1YCR020W-B RSC1P53236 928 aa0.35□□□□□ -2.35
HTL1YCR020W-B ECM18Q04623 453 aa0.35□□□□□ -2.35
HTL1YCR020W-B YDR262WQ12331 272 aa0.35□□□□□ -2.35
HTL1YCR020W-B PUT1P09368 476 aa0.34□□□□□ -2.36
HTL1YCR020W-B RPL18AP0CX49 186 aaKnown RBP0.34□□□□□ -2.36
HTL1YCR020W-B RPL18BP0CX50 186 aaKnown RBP0.34□□□□□ -2.36
HTL1YCR020W-B ERG2P32352 222 aa0.34□□□□□ -2.36
HTL1YCR020W-B POP8P38208 133 aa0.34□□□□□ -2.36
HTL1YCR020W-B SPT8P38915 602 aa0.34□□□□□ -2.36
HTL1YCR020W-B UBC13P52490 153 aa0.34□□□□□ -2.36
HTL1YCR020W-B STE23Q06010 1027 aa0.34□□□□□ -2.36
HTL1YCR020W-B RRP42Q12277 265 aaPredicted RBP0.34□□□□□ -2.36
HTL1YCR020W-B FRE6Q12473 712 aa0.34□□□□□ -2.36
HTL1YCR020W-B NOT5Q12514 560 aaPredicted RBP0.34□□□□□ -2.36
HTL1YCR020W-B BMH1P29311 267 aaKnown RBP0.33□□□□□ -2.36
HTL1YCR020W-B COG7P53195 279 aa0.33□□□□□ -2.36
HTL1YCR020W-B SWC4P53201 476 aa0.33□□□□□ -2.36
HTL1YCR020W-B EOS1P53938 366 aa0.33□□□□□ -2.36
HTL1YCR020W-B TAZ1Q06510 381 aa0.33□□□□□ -2.36
HTL1YCR020W-B PBP4Q07362 185 aaKnown RBP0.33□□□□□ -2.36
HTL1YCR020W-B SAM4Q08985 325 aaKnown RBP0.33□□□□□ -2.36
HTL1YCR020W-B NBL1Q3E7Y6 73 aa0.33□□□□□ -2.36
HTL1YCR020W-B SFC1P33303 322 aa0.32□□□□□ -2.36
HTL1YCR020W-B TIF34P40217 347 aaKnown RBP0.32□□□□□ -2.36
HTL1YCR020W-B SNX4P47057 423 aa0.32□□□□□ -2.36
HTL1YCR020W-B CUE3P53137 624 aaKnown RBP0.32□□□□□ -2.36
HTL1YCR020W-B IZH4Q99393 312 aa0.32□□□□□ -2.36
HTL1YCR020W-B DPB2P24482 689 aaPredicted RBP0.31□□□□□ -2.36
HTL1YCR020W-B AEP1P32493 518 aa0.31□□□□□ -2.36
HTL1YCR020W-B SCM4P32564 187 aa0.31□□□□□ -2.36
HTL1YCR020W-B SKI2P35207 1287 aaKnown RBP RIP-Chip data0.31□□□□□ -2.36not detected
HTL1YCR020W-B YKL162CP36052 402 aa0.31□□□□□ -2.36
HTL1YCR020W-B ARN2P38724 620 aa0.31□□□□□ -2.36
HTL1YCR020W-B CAJ1P39101 391 aa0.31□□□□□ -2.36
HTL1YCR020W-B YER135CP40082 130 aa0.31□□□□□ -2.36
HTL1YCR020W-B SHQ1P40486 507 aaPredicted RBP0.31□□□□□ -2.36
HTL1YCR020W-B CIS3P47001 227 aa0.31□□□□□ -2.36
HTL1YCR020W-B TAD2P47058 250 aa0.31□□□□□ -2.36
HTL1YCR020W-B OKP1P53298 406 aa0.31□□□□□ -2.36
HTL1YCR020W-B YPR064WQ12492 139 aa0.31□□□□□ -2.36
HTL1YCR020W-B MHT1Q12525 324 aa0.31□□□□□ -2.36
HTL1YCR020W-B RAS2P01120 322 aaKnown RBP0.3□□□□□ -2.36
HTL1YCR020W-B RPL31AP0C2H8 113 aaKnown RBP0.3□□□□□ -2.36
HTL1YCR020W-B CSG2P35206 410 aa0.3□□□□□ -2.36
HTL1YCR020W-B GLE2P40066 365 aa0.3□□□□□ -2.36
HTL1YCR020W-B JEM1P40358 645 aa0.3□□□□□ -2.36
HTL1YCR020W-B PEX12Q04370 399 aa0.3□□□□□ -2.36
HTL1YCR020W-B DPP1Q05521 289 aa0.3□□□□□ -2.36
HTL1YCR020W-B YPR1Q12458 312 aa0.3□□□□□ -2.36
HTL1YCR020W-B SKS1Q12505 502 aa0.3□□□□□ -2.36
HTL1YCR020W-B TAL1P15019 335 aaKnown RBP0.29□□□□□ -2.36
HTL1YCR020W-B RPS0AP32905 252 aaKnown RBP0.29□□□□□ -2.36
HTL1YCR020W-B RXT2P38255 430 aa0.29□□□□□ -2.36
HTL1YCR020W-B INA22P40576 216 aa0.29□□□□□ -2.36
HTL1YCR020W-B GDS1P41913 522 aa0.29□□□□□ -2.36
HTL1YCR020W-B NIF3P53081 288 aa0.29□□□□□ -2.36
HTL1YCR020W-B DBP9Q06218 594 aaKnown RBP0.29□□□□□ -2.36
HTL1YCR020W-B GEP5Q12393 293 aa0.29□□□□□ -2.36
HTL1YCR020W-B SAS5Q99314 248 aa0.29□□□□□ -2.36
HTL1YCR020W-B LAS1P36146 502 aaPredicted RBP0.28□□□□□ -2.36
HTL1YCR020W-B YHB1P39676 399 aaKnown RBP0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms