RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	QDR3	P38227	689 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	YBR053C	P38235	358 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	CRG1	P38892	291 aa	RIP-Chip data	6.28	□□□□□ -1.4	RIP-Chip
HSM3	YBR272C	YEL020C	P39994	560 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	PAN6	P40459	309 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	MOB1	P40484	314 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	YCH1	P42937	148 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	IKS1	P47042	667 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	DAN1	P47178	298 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	SCS3	P53012	380 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	RTT102	P53330	157 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	YPL067C	Q02754	198 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	SEC13	Q04491	297 aa	Known RBP	6.28	□□□□□ -1.4
HSM3	YBR272C	SYT1	Q06836	1226 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	NRT1	Q08485	598 aa		6.28	□□□□□ -1.4
HSM3	YBR272C	UBR2	Q07963	1872 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	AI1	P03875	834 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	RHO2	P06781	192 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	CDC4	P07834	779 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	YFL068W	P0CX99	160 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	YLL066W-A	P0CY00	160 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	YLL067W-A	P0CY01	160 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	HAP3	P13434	144 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	CUP2	P15315	225 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	NAR1	P23503	491 aa	Known RBP	6.27	□□□□□ -1.41
HSM3	YBR272C	SAT4	P25333	603 aa	Known RBP	6.27	□□□□□ -1.41
HSM3	YBR272C	ADH7	P25377	361 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	EHD3	P28817	500 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	MSK1	P32048	576 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	AXL2	P38928	823 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	PHO90	P39535	881 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	RPS26A	P39938	119 aa	Known RBP	6.27	□□□□□ -1.41
HSM3	YBR272C	RPS26B	P39939	119 aa	Known RBP	6.27	□□□□□ -1.41
HSM3	YBR272C	SNU13	P39990	126 aa	Known RBP	6.27	□□□□□ -1.41
HSM3	YBR272C	GLR1	P41921	483 aa	Known RBP	6.27	□□□□□ -1.41
HSM3	YBR272C	YFL052W	P43551	465 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	ASG7	P46993	209 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	PHO23	P50947	330 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	MDM34	P53083	459 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	MPA43	P53583	542 aa	Predicted RBP	6.27	□□□□□ -1.41
HSM3	YBR272C	CPR8	P53728	308 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	HXT15	P54854	567 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	VPS28	Q02767	242 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	ELC1	Q03071	99 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	YMR160W	Q03823	816 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	CNL1	Q06333	122 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	MRPL35	Q06678	367 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	AAD4	Q07747	329 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	not detected
HSM3	YBR272C	BTS1	Q12051	335 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	PER33	Q12144	273 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	NBP2	Q12163	236 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	FRE8	Q12209	686 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	YDL199C	Q12407	687 aa		6.27	□□□□□ -1.41
HSM3	YBR272C	CYC7	P00045	113 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	RPS19A	P07280	144 aa	Known RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	RPS19B	P07281	144 aa	Predicted RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	PUT1	P09368	476 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	RPS4A	P0CX35	261 aa	Known RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	RPS4B	P0CX36	261 aa	Known RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	STE18	P18852	110 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	PPH21	P23594	369 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	RPL24B	P24000	155 aa	Known RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	YCL002C	P25565	263 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	SNC1	P31109	117 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	SEC17	P32602	292 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	UTR2	P32623	467 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	TUL1	P36096	758 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	MRPL16	P38064	232 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	GPX2	P38143	162 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	GEP4	P38812	185 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	PAC2	P39937	518 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	OXA1	P39952	402 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	CDC40	P40968	455 aa	Predicted RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	SSY5	P47002	699 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	NIT2	P47016	307 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	ZAP1	P47043	880 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	STR3	P53101	465 aa	Known RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	NAM8	Q00539	523 aa	Known RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	TPS1	Q00764	495 aa	Known RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	YMR099C	Q03161	297 aa	Known RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	GOT1	Q03554	138 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	ADI1	Q03677	179 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	CUE4	Q04201	117 aa	Predicted RBP	6.26	□□□□□ -1.41
HSM3	YBR272C	EST2	Q06163	884 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	IPK1	Q06667	281 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	YCR075W-A	Q3E830	75 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	NUM1	Q00402	2748 aa		6.26	□□□□□ -1.41
HSM3	YBR272C	COX2	P00410	251 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	YPT1	P01123	206 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	BI2	P03873	423 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	CDC6	P09119	513 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	DPM1	P14020	267 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	DAL82	P21705	255 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	ELO2	P25358	347 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	YCR061W	P25639	631 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	MET22	P32179	357 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	CAT2	P32796	670 aa	Known RBP	6.25	□□□□□ -1.41
HSM3	YBR272C	SCD5	P34758	872 aa		6.25	□□□□□ -1.41
HSM3	YBR272C	FRE2	P36033	711 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms