RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 MYOCDQ8IZQ8 938 aa17.25■□□□□ 0.35
CCNE1-204ENST00000574121 CRIPAKQ8N1N5 446 aa17.25■□□□□ 0.35
CCNE1-204ENST00000574121 CPB2Q96IY4 423 aa17.25■□□□□ 0.35
CCNE1-204ENST00000574121 ACO2Q99798 780 aaKnown RBP17.25■□□□□ 0.35
CCNE1-204ENST00000574121 TMEM206Q9H813 350 aa17.25■□□□□ 0.35
CCNE1-204ENST00000574121 FAM105AQ9NUU6 356 aa17.25■□□□□ 0.35
CCNE1-204ENST00000574121 TBC1D7Q9P0N9 293 aa17.25■□□□□ 0.35
CCNE1-204ENST00000574121 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.24■□□□□ 0.35
CCNE1-204ENST00000574121 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.24■□□□□ 0.35
CCNE1-204ENST00000574121 HNRNPDLO14979 420 aaKnown RBP17.24■□□□□ 0.35
CCNE1-204ENST00000574121 TOM1L1O75674 476 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 EDN1P05305 212 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 PTMSP20962 102 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 PROZP22891 400 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 DEFB103AP81534 67 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 DCAF4L1Q3SXM0 396 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 LRIT3Q3SXY7 679 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 ZC2HC1CQ53FD0 456 aaPredicted RBP17.24■□□□□ 0.35
CCNE1-204ENST00000574121 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 EPM2AIP1Q7L775 607 aaPredicted RBP17.24■□□□□ 0.35
CCNE1-204ENST00000574121 ECHDC2Q86YB7 292 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 HERC6Q8IVU3 1022 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 ACCSQ96QU6 501 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 TARS2Q9BW92 718 aaKnown RBP17.24■□□□□ 0.35
CCNE1-204ENST00000574121 PDZD7Q9H5P4 517 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 PTPRHQ9HD43 1115 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 PCDHB7Q9Y5E2 793 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 MYH11P35749 1972 aa17.24■□□□□ 0.35
CCNE1-204ENST00000574121 MICAL3Q7RTP6 2002 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 TTLL13PA6NNM8 815 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 HOXA2O43364 376 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 GJB5O95377 273 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 MYBP10242 640 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 LIG4P49917 911 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 CASP5P51878 434 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 MPZL3Q6UWV2 235 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 MRPL10Q7Z7H8 261 aaKnown RBP17.23■□□□□ 0.35
CCNE1-204ENST00000574121 ZNF598Q86UK7 904 aaKnown RBP17.23■□□□□ 0.35
CCNE1-204ENST00000574121 HACE1Q8IYU2 909 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 ZNF507Q8TCN5 953 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 PGBD4Q96DM1 585 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 BICD1Q96G01 975 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 TRIM6Q9C030 488 aaPredicted RBP17.23■□□□□ 0.35
CCNE1-204ENST00000574121 LRFN2Q9ULH4 789 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 PCDHA5Q9Y5H7 936 aa17.23■□□□□ 0.35
CCNE1-204ENST00000574121 CLDN3O15551 220 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 KIF20AO95235 890 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 MCF2P10911 925 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 SMAD3P84022 425 aaKnown RBP17.22■□□□□ 0.35
CCNE1-204ENST00000574121 BMT2Q1RMZ1 405 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 ZNF568Q3ZCX4 644 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 SLFN12LQ6IEE8 588 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 HPS3Q969F9 1004 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 EIF2AQ9BY44 585 aaKnown RBP17.22■□□□□ 0.35
CCNE1-204ENST00000574121 CLSTN2Q9H4D0 955 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 UBN1Q9NPG3 1134 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 INSL6Q9Y581 213 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 ZMYM2Q9UBW7 1377 aa17.22■□□□□ 0.35
CCNE1-204ENST00000574121 ABLIM1O14639 778 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 DGKIO75912 1065 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 ATF7P17544 494 aaPredicted RBP17.21■□□□□ 0.35
CCNE1-204ENST00000574121 SNRPFP62306 86 aaKnown RBP17.21■□□□□ 0.35
CCNE1-204ENST00000574121 HTRA4P83105 476 aaPredicted RBP17.21■□□□□ 0.35
CCNE1-204ENST00000574121 MCL1Q07820 350 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 STK4Q13043 487 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 KYAT1Q16773 422 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 GPT2Q8TD30 523 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 RAD9AQ99638 391 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 TCHPQ9BT92 498 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 ZBED2Q9BTP6 218 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 FGFBP2Q9BYJ0 223 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 NUP62CLQ9H1M0 184 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 SLC39A2Q9NP94 309 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 IPPQ9Y573 584 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 PCDHA11Q9Y5I1 949 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 STYXL1Q9Y6J8 313 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 TTC3P53804 2025 aa17.21■□□□□ 0.35
CCNE1-204ENST00000574121 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 TLL1O43897 1013 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 PRPF6O94906 941 aaKnown RBP17.2■□□□□ 0.34
CCNE1-204ENST00000574121 UPP2O95045 317 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 NPTXRO95502 500 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCNE1-204ENST00000574121 RAB30Q15771 203 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 COBLL1Q53SF7 1204 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 CDR2LQ86X02 465 aaPredicted RBP17.2■□□□□ 0.34
CCNE1-204ENST00000574121 SYCP3Q8IZU3 236 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 TRIML1Q8N9V2 468 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 SMG8Q8ND04 991 aaKnown RBP17.2■□□□□ 0.34
CCNE1-204ENST00000574121 GLIS3Q8NEA6 775 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 SCFD1Q8WVM8 642 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 GBP3Q9H0R5 595 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 CDT1Q9H211 546 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 CGNQ9P2M7 1197 aaKnown RBP17.2■□□□□ 0.34
CCNE1-204ENST00000574121 ANKFY1Q9P2R3 1169 aa17.2■□□□□ 0.34
CCNE1-204ENST00000574121 USP20Q9Y2K6 914 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms