RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PCDHGA12O60330 932 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 CCND1P24385 295 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 NEK2P51955 445 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 PLP2Q04941 152 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 DUSP8Q13202 625 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 TCTN3Q6NUS6 607 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 ADGRE4PQ86SQ3 457 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 PNMA8AQ86V59 439 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-206ENST00000523469 CMTM4Q8IZR5 234 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 MSL3Q8N5Y2 521 aaKnown RBP7.88□□□□□ -1.15
CPNE3-206ENST00000523469 FBXO41Q8TF61 875 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 SNX33Q8WV41 574 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 JADE3Q92613 823 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 AGO3Q9H9G7 860 aaKnown RBP7.88□□□□□ -1.15
CPNE3-206ENST00000523469 IL23AQ9NPF7 189 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 RCAN3Q9UKA8 241 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 ZFR2Q9UPR6 939 aaKnown RBP7.88□□□□□ -1.15
CPNE3-206ENST00000523469 PCDHGA9Q9Y5G4 932 aaKnown RBP7.88□□□□□ -1.15
CPNE3-206ENST00000523469 PCDHGA8Q9Y5G5 932 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 PCDHGA7Q9Y5G6 932 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 PCDHGA6Q9Y5G7 932 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 PCDHGA3Q9Y5H0 932 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 PCDHGA2Q9Y5H1 932 aa7.88□□□□□ -1.15
CPNE3-206ENST00000523469 FOXD2O60548 495 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-206ENST00000523469 PHF2O75151 1096 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 RAD17O75943 681 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 LILRA6Q6PI73 481 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 ABHD15Q6UXT9 468 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 GPR156Q8NFN8 814 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 SLC2A13Q96QE2 648 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 TLR9Q9NR96 1032 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 SLC30A1Q9Y6M5 507 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 TOPBP1Q92547 1522 aa7.87□□□□□ -1.15
CPNE3-206ENST00000523469 KDM6BO15054 1643 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 K7ESM1 405 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 ALDH1L1O75891 902 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 SYN1P17600 705 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 MCAMP43121 646 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 DUSP2Q05923 314 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 GRM7Q14831 915 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 ZBTB46Q86UZ6 589 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
CPNE3-206ENST00000523469 DNERQ8NFT8 737 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 RIN2Q8WYP3 895 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-206ENST00000523469 SAMD11Q96NU1 681 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 OR14A2Q96R54 314 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 ADI1Q9BV57 179 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 RBM12Q9NTZ6 932 aaKnown RBP7.86□□□□□ -1.15
CPNE3-206ENST00000523469 NCDNQ9UBB6 729 aa7.86□□□□□ -1.15
CPNE3-206ENST00000523469 TARBP1Q13395 1621 aaKnown RBP7.85□□□□□ -1.15
CPNE3-206ENST00000523469 UBE2QL1A1L167 161 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 BTBD11A6QL63 1104 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 PATE3B3GLJ2 98 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 FOXS1O43638 330 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 NDUFS2O75306 463 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 GYPEP15421 78 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 NPEPPSP55786 919 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 PLEKHG6Q3KR16 790 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 EFCAB2Q5VUJ9 269 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 FUKQ8N0W3 1084 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 ZNF480Q8WV37 535 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 TEKT5Q96M29 485 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 TCF25Q9BQ70 676 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 PLA2G3Q9NZ20 509 aa7.85□□□□□ -1.15
CPNE3-206ENST00000523469 PPM1GO15355 546 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-206ENST00000523469 AKR1B10O60218 316 aa7.84□□□□□ -1.15
CPNE3-206ENST00000523469 SNUPNO95149 360 aaKnown RBP7.84□□□□□ -1.15
CPNE3-206ENST00000523469 GASTP01350 101 aa7.84□□□□□ -1.15
CPNE3-206ENST00000523469 RECQLP46063 649 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-206ENST00000523469 PPP3CAQ08209 521 aa7.84□□□□□ -1.15
CPNE3-206ENST00000523469 TTF1Q15361 905 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-206ENST00000523469 POLNQ7Z5Q5 900 aa7.84□□□□□ -1.15
CPNE3-206ENST00000523469 PPM1NQ8N819 430 aa7.84□□□□□ -1.15
CPNE3-206ENST00000523469 TSPOAP1O95153 1857 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 SNAPC4Q5SXM2 1469 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 GSPT1P15170 499 aaKnown RBP7.83□□□□□ -1.16
CPNE3-206ENST00000523469 C5AR1P21730 350 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 MST1LQ2TV78 715 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 FAM111BQ6SJ93 734 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 TTC9BQ8N6N2 239 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 OR5M3Q8NGP4 307 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 TMEM176AQ96HP8 235 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 LOXL4Q96JB6 756 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 ENKD1Q9H0I2 346 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 DMRT3Q9NQL9 472 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 GPRC5DQ9NZD1 345 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 TUBD1Q9UJT1 453 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 DNM3Q9UQ16 869 aa7.83□□□□□ -1.16
CPNE3-206ENST00000523469 ZNF623O75123 536 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 ECHS1P30084 290 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 ADSLP30566 484 aaPredicted RBP7.82□□□□□ -1.16
CPNE3-206ENST00000523469 CRHR1P34998 444 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 MSX2P35548 267 aaPredicted RBP7.82□□□□□ -1.16
CPNE3-206ENST00000523469 CASRP41180 1078 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 WASP42768 502 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 SLC16A1P53985 500 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 MGAT2Q10469 447 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 FOXL1Q12952 345 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 ICAM4Q14773 271 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 ODF1Q14990 250 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms