RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 DDX27Q96GQ7 796 aaKnown RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 TSPYL2Q9H2G4 693 aaPredicted RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ZNHIT6Q9NWK9 470 aaKnown RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 KIAA0355O15063 1070 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 OGTO15294 1046 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 NPTXRO95502 500 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 KRT19P08727 400 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 ERCC5P28715 1186 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 INTS8Q75QN2 995 aaKnown RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 FAM126BQ8IXS8 530 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 FIBCD1Q8N539 461 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 TTC39CQ8N584 583 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF397Q8NF99 534 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 P2RX5Q93086 422 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 TMEM169Q96HH4 297 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 GLRA2P23416 452 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 NR2F2P24468 414 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 CD52P31358 61 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 PPM1AP35813 382 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF165P49910 485 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 SLC12A3P55017 1021 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 MYBPC2Q14324 1141 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF618Q5T7W0 954 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 NOC4LQ9BVI4 516 aaKnown RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 DPP7Q9UHL4 492 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 PADI3Q9ULW8 664 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 CTNND2Q9UQB3 1225 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 MBLAC1A4D2B0 266 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 ARL2P36404 184 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 SPIRE1Q08AE8 756 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 CUL4BQ13620 913 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 TNFSF13BQ9Y275 285 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 TLL1O43897 1013 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 RHOBTB3O94955 611 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 EOMESO95936 686 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 IQCF3P0C7M6 154 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 MYL5Q02045 173 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 DCAF17Q5H9S7 520 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 FAM117BQ6P1L5 589 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 NT5DC4Q86YG4 428 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 NPAS4Q8IUM7 802 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 FAM186BQ8IYM0 893 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 CEP63Q96MT8 703 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 PCYT2Q99447 389 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 NFKBIZQ9BYH8 718 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 SLC28A3Q9HAS3 691 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 GPRC5CQ9NQ84 441 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 COLQQ9Y215 455 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-212ENST00000496462 GDAQ9Y2T3 454 aa9.39□□□□□ -0.91
U2AF1-212ENST00000496462 NMT1P30419 496 aaKnown RBP9.38□□□□□ -0.91
U2AF1-212ENST00000496462 THEM5Q8N1Q8 247 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 SAMD11Q96NU1 681 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 TARS2Q9BW92 718 aaKnown RBP9.38□□□□□ -0.91
U2AF1-212ENST00000496462 RSAD1Q9HA92 442 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 UBQLN1Q9UMX0 589 aaKnown RBP9.38□□□□□ -0.91
U2AF1-212ENST00000496462 HPSEQ9Y251 543 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 GIT1Q9Y2X7 761 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 SNX16P57768 344 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 TNNC1P63316 161 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 IRX5P78411 483 aaPredicted RBP9.38□□□□□ -0.91
U2AF1-212ENST00000496462 TFAMQ00059 246 aaKnown RBP9.38□□□□□ -0.91
U2AF1-212ENST00000496462 CAPSQ13938 189 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 TARBP2Q15633 366 aaKnown RBP9.38□□□□□ -0.91
U2AF1-212ENST00000496462 PTPROQ16827 1216 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 FBXO47Q5MNV8 452 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 DSTYKQ6XUX3 929 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 USP49Q70CQ1 688 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 PPFIBP1Q86W92 1011 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 DBF4BQ8NFT6 615 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 LUC7LQ9NQ29 371 aaKnown RBP9.38□□□□□ -0.91
U2AF1-212ENST00000496462 BLOC1S4Q9NUP1 217 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 OSTNP61366 133 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF200P98182 395 aaPredicted RBP9.38□□□□□ -0.91
U2AF1-212ENST00000496462 TYRO3Q06418 890 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 LRRC26Q2I0M4 334 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 B3GNT9Q6UX72 402 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF720Q7Z2F6 126 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 CACNA2D4Q7Z3S7 1137 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 VPS36Q86VN1 386 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 ASAP3Q8TDY4 903 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 MAPK8IP1Q9UQF2 711 aa9.38□□□□□ -0.91
U2AF1-212ENST00000496462 MGAMO43451 1857 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ATP8B3O60423 1300 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 FAM237AA0A1B0GTK4 181 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 SYCE3A1L190 88 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 GOLGA6L3A6NEY3 463 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 TBKBP1A7MCY6 615 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
U2AF1-212ENST00000496462 TADA2AO75478 443 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 PTGS1P23219 599 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 ELF1P32519 619 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 PNPLA4P41247 253 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 GRIN1Q05586 938 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 PDXDC1Q6P996 788 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 MSANTD4Q8NCY6 345 aa9.37□□□□□ -0.91
U2AF1-212ENST00000496462 PHOSPHO2Q8TCD6 241 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms