RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 WDR43Q15061 677 aaKnown RBP eCLIP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 TBC1D25Q3MII6 688 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 SETMARQ53H47 684 aaPredicted RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 CAVIN4Q5BKX8 364 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 DALRD3Q5D0E6 543 aaKnown RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 INTS11Q5TA45 600 aaKnown RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 CAPRIN2Q6IMN6 1127 aaKnown RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 CNSTQ6PJW8 725 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 PPP1R21Q6ZMI0 780 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 TOGARAM2Q6ZUX3 1019 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 INTS8Q75QN2 995 aaKnown RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 B4GALNT4Q76KP1 1039 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 OTOP3Q7RTS5 596 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 LRP10Q7Z4F1 713 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 RALYLQ86SE5 291 aaKnown RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 TMEFF1Q8IYR6 380 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 TBC1D21Q8IYX1 336 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 RTKN2Q8IZC4 609 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 VPS52Q8N1B4 723 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 OR52K2Q8NGK3 314 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 CCHCR1Q8TD31 782 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 CEP295NLQ96MC4 621 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 PPM1MQ96MI6 270 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 C7orf25Q9BPX7 421 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 KCTD10Q9H3F6 313 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 SYNCQ9H7C4 482 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 VCPKMTQ9H867 229 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 NCOA5Q9HCD5 579 aaKnown RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 ABCF3Q9NUQ8 709 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 OBP2AQ9NY56 170 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 ZMYM5Q9UJ78 669 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 ZNF180Q9UJW8 692 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 STRIP2Q9ULQ0 834 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 PCDHGB3Q9Y5G1 929 aa6.14□□□□□ -1.43
COMMD6-210ENST00000483290 EPN1Q9Y6I3 576 aaPredicted RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 SPAG9O60271 1321 aaKnown RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 DHX29Q7Z478 1369 aaKnown RBP6.14□□□□□ -1.43
COMMD6-210ENST00000483290 E2F8A0AVK6 867 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 RBAK-RBAKDNI3L0D1 243 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 OVOL3O00110 214 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 XPOTO43592 962 aaKnown RBP6.13□□□□□ -1.43
COMMD6-210ENST00000483290 ZBTB14O43829 449 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 TMEM127O75204 238 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 OFD1O75665 1012 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 SERPINC1P01008 464 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 TOP1P11387 765 aaKnown RBP6.13□□□□□ -1.43
COMMD6-210ENST00000483290 RPS6KB1P23443 525 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 ELF1P32519 619 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 GJA9P57773 515 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 CACNB2Q08289 660 aaPredicted RBP6.13□□□□□ -1.43
COMMD6-210ENST00000483290 DMPKQ09013 629 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 PPP2R5DQ14738 602 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 IQCB1Q15051 598 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 SHROOM1Q2M3G4 852 aaPredicted RBP6.13□□□□□ -1.43
COMMD6-210ENST00000483290 VWA3BQ502W6 1294 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 ANKRD39Q53RE8 183 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 ATF7IPQ6VMQ6 1270 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 FAM196AQ6ZSG2 479 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 TTC39CQ8N584 583 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 MAGEB6Q8N7X4 407 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 BBOF1Q8ND07 529 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 RUFY2Q8WXA3 655 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 HDAC2Q92769 488 aaKnown RBP6.13□□□□□ -1.43
COMMD6-210ENST00000483290 TIFAQ96CG3 184 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 SMAD5Q99717 465 aaKnown RBP6.13□□□□□ -1.43
COMMD6-210ENST00000483290 TUBA1CQ9BQE3 449 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 SLC13A1Q9BZW2 595 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 ZNF408Q9H9D4 720 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 TOMM22Q9NS69 142 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 RNF19AQ9NV58 838 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 USP40Q9NVE5 1235 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 SAGE1Q9NXZ1 904 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 FAM50BQ9Y247 325 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 ABCC9O60706 1549 aa6.13□□□□□ -1.43
COMMD6-210ENST00000483290 ANO9A1A5B4 782 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 GIPC1O14908 333 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 GAKO14976 1311 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 PRICKLE3O43900 615 aaPredicted RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 KATNA1O75449 491 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 USP2O75604 605 aaPredicted RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 TGDSO95455 350 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 PARP1P09874 1014 aaKnown RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 TNFRSF1AP19438 455 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 CAPN3P20807 821 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 KIR2DL1P43626 348 aaPredicted RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 KIR2DL2P43627 348 aaPredicted RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 CDK8P49336 464 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 PMS1P54277 932 aaKnown RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 HDAC4P56524 1084 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 YBX1P67809 324 aaKnown RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 PIN1Q13526 163 aaPredicted RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 LAMB3Q13751 1172 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 RAB33AQ14088 237 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 TCEA2Q15560 299 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 ASIC2Q16515 512 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 GEN1Q17RS7 908 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 CEP68Q76N32 757 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 FASTKD5Q7L8L6 764 aaKnown RBP6.12□□□□□ -1.43
COMMD6-210ENST00000483290 SPATA21Q7Z572 469 aa6.12□□□□□ -1.43
COMMD6-210ENST00000483290 CCDC84Q86UT8 332 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms