RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 SPDYE3A6NKU9 549 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 RGS16O15492 202 aaPredicted RBP10.91□□□□□ -0.66
COMMD4-203ENST00000480484 SMNDC1O75940 238 aaKnown RBP eCLIP10.91□□□□□ -0.66
COMMD4-203ENST00000480484 RGS20O76081 388 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 USP11P51784 963 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
COMMD4-203ENST00000480484 SNX1Q13596 522 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 SETDB1Q15047 1291 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 LRRC14Q15048 493 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 NFE2Q16621 373 aaPredicted RBP10.91□□□□□ -0.66
COMMD4-203ENST00000480484 CCDC92Q53HC0 331 aaPredicted RBP10.91□□□□□ -0.66
COMMD4-203ENST00000480484 CDCA2Q69YH5 1023 aaPredicted RBP10.91□□□□□ -0.66
COMMD4-203ENST00000480484 TBCKQ8TEA7 893 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 SPIRE2Q8WWL2 714 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 ELMO3Q96BJ8 720 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 PBKQ96KB5 322 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 PIGSQ96S52 555 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 MKNK1Q9BUB5 465 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 CUEDC2Q9H467 287 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 C6orf229H3BNL8 230 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 GSTA1P08263 222 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 PLTPP55058 493 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 GSTO1P78417 241 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 TMC7Q7Z402 723 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 CCDC89Q8N998 374 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 SH3TC2Q8TF17 1288 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 NELL1Q92832 810 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 BARHL2Q9NY43 387 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 CPSF2Q9P2I0 782 aaKnown RBP10.91□□□□□ -0.66
COMMD4-203ENST00000480484 GGA1Q9UJY5 639 aa10.91□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L5A8MUK1 530 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 SOCS7O14512 581 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 LZTS3O60299 673 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-203ENST00000480484 MAPK8P45983 427 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 ITIH4Q14624 930 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 ZRSR2Q15696 482 aaKnown RBP10.9□□□□□ -0.66
COMMD4-203ENST00000480484 GNPTABQ3T906 1256 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 SEPT12Q8IYM1 358 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 SAMD3Q8N6K7 520 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 VPS37AQ8NEZ2 397 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 FRMD6Q96NE9 622 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 MLXIPLQ9NP71 852 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 TRIM33Q9UPN9 1127 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 ASAP2O43150 1006 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 LRRN2O75325 713 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 CAPN15O75808 1086 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 FGGP02679 453 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 KRT16P08779 473 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 CASP5P51878 434 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 NAPAP54920 295 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 SNAP25P60880 206 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 NCALDP61601 193 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 RIPK1Q13546 671 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 ZNF268Q14587 947 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-203ENST00000480484 RBBP5Q15291 538 aaKnown RBP10.9□□□□□ -0.66
COMMD4-203ENST00000480484 TAF11Q15544 211 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 DENND2CQ68D51 928 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 LRRC55Q6ZSA7 311 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 PIGWQ7Z7B1 504 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 TBC1D16Q8TBP0 767 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 ACTRT1Q8TDG2 376 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 E2F7Q96AV8 911 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 TLCD1Q96CP7 247 aa10.9□□□□□ -0.66
COMMD4-203ENST00000480484 NSRP1Q9H0G5 558 aaKnown RBP10.9□□□□□ -0.66
COMMD4-203ENST00000480484 GPR75-ASB3A0A0A6YYF3 556 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 MPHOSPH10O00566 681 aaKnown RBP10.9□□□□□ -0.67
COMMD4-203ENST00000480484 STAT3P40763 770 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 GTF2IP78347 998 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 PTK2Q05397 1052 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 ADCY2Q08462 1091 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 GRAMD1BQ3KR37 738 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 CRY2Q49AN0 593 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 ANKRD20A2Q5SQ80 823 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 ANKRD20A1Q5TYW2 823 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 MEX3CQ5U5Q3 659 aaKnown RBP10.9□□□□□ -0.67
COMMD4-203ENST00000480484 ANKRD20A3Q5VUR7 823 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 C16orf86Q6ZW13 317 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 CPNE8Q86YQ8 564 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 LRRC47Q8N1G4 583 aaKnown RBP10.9□□□□□ -0.67
COMMD4-203ENST00000480484 EIF1ADQ8N9N8 165 aaKnown RBP10.9□□□□□ -0.67
COMMD4-203ENST00000480484 ATXN2LQ8WWM7 1075 aaKnown RBP10.9□□□□□ -0.67
COMMD4-203ENST00000480484 ZMYND12Q9H0C1 365 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 NUCKS1Q9H1E3 243 aaKnown RBP10.9□□□□□ -0.67
COMMD4-203ENST00000480484 MAGEF1Q9HAY2 307 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 SLC5A4Q9NY91 659 aa10.9□□□□□ -0.67
COMMD4-203ENST00000480484 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.9□□□□□ -0.67
COMMD4-203ENST00000480484 E9PMD0 336 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 RARAP10276 462 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 SLC9A1P19634 815 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 CCND1P24385 295 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 EIF3BP55884 814 aaKnown RBP10.89□□□□□ -0.67
COMMD4-203ENST00000480484 PTK7Q13308 1070 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 RGL4Q8IZJ4 473 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 OSBPL1AQ9BXW6 950 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 SH3GLB2Q9NR46 395 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 FAM114A2Q9NRY5 505 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 CLIC5Q9NZA1 410 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 IP6K2Q9UHH9 426 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 SNX24Q9Y343 169 aa10.89□□□□□ -0.67
COMMD4-203ENST00000480484 MYH1P12882 1939 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms