RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 LCTP09848 1927 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 FAM86C2PA6NEL3 165 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 ORC4O43929 436 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 FGAP02671 866 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 C6orf222P0C671 652 aaPredicted RBP11.65□□□□□ -0.54
LINC01090-202ENST00000434418 HSPD1P10809 573 aaKnown RBP11.65□□□□□ -0.54
LINC01090-202ENST00000434418 NME1P15531 152 aaKnown RBP11.65□□□□□ -0.54
LINC01090-202ENST00000434418 PTGS1P23219 599 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 ITGB8P26012 769 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 SLC16A2P36021 539 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 COL9A2Q14055 689 aaPredicted RBP11.65□□□□□ -0.54
LINC01090-202ENST00000434418 SHHQ15465 462 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 KCNA10Q16322 511 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 NKPD1Q17RQ9 610 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 CCDC144BQ3MJ40 725 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 MCMDC2Q4G0Z9 681 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 MUM1L1Q5H9M0 696 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 ARTNQ5T4W7 220 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 RUFY4Q6ZNE9 571 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 SPACA3Q8IXA5 215 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 NETO1Q8TDF5 533 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
LINC01090-202ENST00000434418 ASTN1O14525 1302 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 RGS13O14921 159 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 DUSP11O75319 330 aaKnown RBP11.64□□□□□ -0.55
LINC01090-202ENST00000434418 IGHDP01880 384 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 CLTBP09497 229 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 ETV3P41162 512 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 ALX1Q15699 326 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 ZNF746Q6NUN9 644 aaPredicted RBP11.64□□□□□ -0.55
LINC01090-202ENST00000434418 LSRQ86X29 649 aaPredicted RBP11.64□□□□□ -0.55
LINC01090-202ENST00000434418 TBC1D10CQ8IV04 446 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 FAM133AQ8N9E0 248 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 EXOC6Q8TAG9 804 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 ABHD16BQ9H3Z7 469 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 STARD7Q9NQZ5 370 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 MTMR10Q9NXD2 777 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 CCPG1Q9ULG6 757 aa11.64□□□□□ -0.55
LINC01090-202ENST00000434418 COL6A3P12111 3177 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 LAMA4Q16363 1823 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.63□□□□□ -0.55
LINC01090-202ENST00000434418 ACRP10323 421 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 IMPDH2P12268 514 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 ATF4P18848 351 aaPredicted RBP11.63□□□□□ -0.55
LINC01090-202ENST00000434418 GBP1P32455 592 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 EPHB4P54760 987 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 BEX3Q00994 111 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 CCSAPQ6IQ19 270 aaPredicted RBP11.63□□□□□ -0.55
LINC01090-202ENST00000434418 NSMFQ6X4W1 530 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 NOL8Q76FK4 1167 aaKnown RBP11.63□□□□□ -0.55
LINC01090-202ENST00000434418 EEPD1Q7L9B9 569 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 CHD1LQ86WJ1 897 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 SMC5Q8IY18 1101 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 MFSD4AQ8N468 514 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 SLC17A8Q8NDX2 589 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 KLHDC9Q8NEP7 349 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 DCAF4Q8WV16 495 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 SLC9A7Q96T83 725 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 TMEM47Q9BQJ4 181 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 KATNBL1Q9H079 304 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 RWDD1Q9H446 243 aaPredicted RBP11.63□□□□□ -0.55
LINC01090-202ENST00000434418 CAPN6Q9Y6Q1 641 aa11.63□□□□□ -0.55
LINC01090-202ENST00000434418 NEDD4P46934 1319 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 LRRN2O75325 713 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 ICAM1P05362 532 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 ASGR1P07306 291 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 FGRP09769 529 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 TOP1P11387 765 aaKnown RBP11.62□□□□□ -0.55
LINC01090-202ENST00000434418 SDSP20132 328 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 NOVP48745 357 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 IFI16Q16666 785 aaKnown RBP11.62□□□□□ -0.55
LINC01090-202ENST00000434418 NFXL1Q6ZNB6 911 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 FBXO16Q8IX29 292 aaPredicted RBP11.62□□□□□ -0.55
LINC01090-202ENST00000434418 Q8N3U1 123 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 NUP133Q8WUM0 1156 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 Q96M66 194 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 KREMEN1Q96MU8 473 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 SRRTQ9BXP5 876 aaKnown RBP11.62□□□□□ -0.55
LINC01090-202ENST00000434418 UPF3AQ9H1J1 476 aaKnown RBP11.62□□□□□ -0.55
LINC01090-202ENST00000434418 CYP39A1Q9NYL5 469 aa11.62□□□□□ -0.55
LINC01090-202ENST00000434418 LAMA2P24043 3122 aaKnown RBP11.62□□□□□ -0.55
LINC01090-202ENST00000434418 ZMYM6O95789 1325 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 NFIBO00712 420 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 KIAA0355O15063 1070 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 CTAGE5O15320 804 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 PLA2G6O60733 806 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 CST5P28325 142 aaPredicted RBP11.61□□□□□ -0.55
LINC01090-202ENST00000434418 CD96P40200 585 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 GJA9P57773 515 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 NUCB1Q02818 461 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 TNFAIP2Q03169 654 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 TKFCQ3LXA3 575 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 TMEM63BQ5T3F8 832 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 SYDE2Q5VT97 1194 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 CWC27Q6UX04 472 aaKnown RBP11.61□□□□□ -0.55
LINC01090-202ENST00000434418 MFSD6Q6ZSS7 791 aa11.61□□□□□ -0.55
LINC01090-202ENST00000434418 ANKRD33Q7Z3H0 272 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms