RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 HGSO14964 777 aaPredicted RBP10.35□□□□□ -0.75
CDRT1-204ENST00000395906 TBX10O75333 385 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 OR6B1O95007 311 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 RXRGP48443 463 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 DNM2P50570 870 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 MCMDC2Q4G0Z9 681 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 VWA3BQ502W6 1294 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 FAM209AQ5JX71 171 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 KRT40Q6A162 431 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 C1orf228Q6PIY5 440 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 ACAD11Q709F0 780 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 SH3RF1Q7Z6J0 888 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 SLC51AQ86UW1 340 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 SKA1Q96BD8 255 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
CDRT1-204ENST00000395906 NSMCE3Q96MG7 304 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 STX8Q9UNK0 236 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 RTCBQ9Y3I0 505 aaKnown RBP10.35□□□□□ -0.75
CDRT1-204ENST00000395906 NOX1Q9Y5S8 564 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 NUMBLQ9Y6R0 609 aa10.35□□□□□ -0.75
CDRT1-204ENST00000395906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
CDRT1-204ENST00000395906 TLDC2A0PJX2 215 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 SPDYE16A6NNV3 312 aaPredicted RBP10.34□□□□□ -0.75
CDRT1-204ENST00000395906 H7C1D1 291 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 CES2O00748 559 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 CYTH3O43739 400 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ADAM23O75077 832 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 COBLO75128 1261 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ZBED1O96006 694 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 PTPN4P29074 926 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 GRIA2P42262 883 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 KIF11P52732 1056 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 POLGP54098 1239 aaPredicted RBP10.34□□□□□ -0.75
CDRT1-204ENST00000395906 TUBA4AP68366 448 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 GRM2Q14416 872 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 RABL6Q3YEC7 729 aaPredicted RBP10.34□□□□□ -0.75
CDRT1-204ENST00000395906 HSP90AA5PQ58FG0 334 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 GJC2Q5T442 439 aaPredicted RBP10.34□□□□□ -0.75
CDRT1-204ENST00000395906 METTL21CQ5VZV1 264 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 TMTC3Q6ZXV5 915 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 CATIPQ7Z7H3 387 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ZNF34Q8IZ26 560 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 LPIN2Q92539 896 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 STMN2Q93045 179 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ERP27Q96DN0 273 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 PAGE5Q96GU1 130 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 NEUROD6Q96NK8 337 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ALG1Q9BT22 464 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 USP29Q9HBJ7 922 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 FAF1Q9UNN5 650 aaPredicted RBP10.34□□□□□ -0.75
CDRT1-204ENST00000395906 NUP98P52948 1817 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 NPHP3-ACAD11A0A0J9YXS1 232 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 A0A1W2PQJ5 194 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 WTIPA6NIX2 430 aaPredicted RBP10.34□□□□□ -0.75
CDRT1-204ENST00000395906 RASA4BC9J798 803 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 DAPK3O43293 454 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 RASA4O43374 803 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 HNRNPCL1O60812 293 aaKnown RBP10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ZPR1O75312 459 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 DGKIO75912 1065 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 SRGNP10124 158 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ITGA6P23229 1130 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 AFMP43652 599 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 NAA20P61599 178 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 PFKPQ01813 784 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 GRIN1Q05586 938 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 LRP8Q14114 963 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 LPIN1Q14693 890 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ZNF423Q2M1K9 1284 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ARL13BQ3SXY8 428 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 RRAGBQ5VZM2 374 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 DENND2CQ68D51 928 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ZNF280CQ8ND82 737 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 TTLL11Q8NHH1 800 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 USP6NLQ92738 828 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 MTMR8Q96EF0 704 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ECSITQ9BQ95 431 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 TANGO6Q9C0B7 1094 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 TCP11L1Q9NUJ3 509 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 MKS1Q9NXB0 559 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 SELENONQ9NZV5 590 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ZNHIT2Q9UHR6 403 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 ANGPTL2Q9UKU9 493 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 TELO2Q9Y4R8 837 aa10.34□□□□□ -0.75
CDRT1-204ENST00000395906 GOLGA8BA8MQT2 603 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 TTC34A8MYJ7 566 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 TNFRSF10AO00220 468 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 RNASEH1O60930 286 aaKnown RBP10.33□□□□□ -0.76
CDRT1-204ENST00000395906 PCCAP05165 728 aaPredicted RBP10.33□□□□□ -0.76
CDRT1-204ENST00000395906 EEF1GP26641 437 aaKnown RBP10.33□□□□□ -0.76
CDRT1-204ENST00000395906 RFC4P35249 363 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 MAGEA1P43355 309 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 YARSP54577 528 aaKnown RBP10.33□□□□□ -0.76
CDRT1-204ENST00000395906 TUBA1BP68363 451 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 TXNRD1Q16881 649 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 SPDYAQ5MJ70 313 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 KLHDC10Q6PID8 442 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 RBM44Q6ZP01 1051 aaKnown RBP10.33□□□□□ -0.76
CDRT1-204ENST00000395906 TUBA1AQ71U36 451 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 SCFD2Q8WU76 684 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms