RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 DEPTORQ8TB45 409 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 ZBTB45Q96K62 511 aaPredicted RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 COL1A2P08123 1366 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 GOLGA8IPA6NC78 632 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 GOLGA8JA6NMD2 632 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 MAGEB2O15479 319 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 GAS2O43903 313 aaKnown RBP11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 INHAP05111 366 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 RPL13P26373 211 aaKnown RBP11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 TNNT3P45378 269 aaPredicted RBP11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 KLK7P49862 253 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 DNM2P50570 870 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 C1QTNF8P60827 252 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 TBX2Q13207 712 aaPredicted RBP11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 MXD4Q14582 209 aaPredicted RBP11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 VWA3BQ502W6 1294 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 RUFY4Q6ZNE9 571 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 RETREG2Q8NC44 543 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 RABGGTAQ92696 567 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 JPH2Q9BR39 696 aaPredicted RBP11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 HAPLN2Q9GZV7 340 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 MINDY3Q9H8M7 445 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 XPNPEP3Q9NQH7 507 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 WBP1LQ9NX94 342 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 HDAC6Q9UBN7 1215 aa11.06□□□□□ -0.64
PRAMEF4-201ENST00000235349 RRN3P2A6NIE6 340 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 RNF225M0QZC1 329 aaPredicted RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 TREHO43280 583 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 GNA14O95837 355 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 TUBBP07437 444 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 IQCF3P0C7M6 154 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 CASQ1P31415 396 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 GRK4P32298 578 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 NKX3-2P78367 333 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 ADAM17P78536 824 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 KCNA10Q16322 511 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 MAN2A1Q16706 1144 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 CCSAPQ6IQ19 270 aaPredicted RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 NFRKBQ6P4R8 1299 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 TRIM65Q6PJ69 517 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 FRMD5Q7Z6J6 570 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 SLC9A9Q8IVB4 645 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 KLHDC9Q8NEP7 349 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 SH3TC2Q8TF17 1288 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 HVCN1Q96D96 273 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 NLRP4Q96MN2 994 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 TARS2Q9BW92 718 aaKnown RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 CCDC113Q9H0I3 377 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 NDST4Q9H3R1 872 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 IFT122Q9HBG6 1241 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 ARFGAP3Q9NP61 516 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 HSPBP1Q9NZL4 362 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 EXOC7Q9UPT5 735 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 AKT3Q9Y243 479 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 A0A087WZ62 844 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 ASAP2O43150 1006 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 EXOC3O60645 756 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 PSMC2P35998 433 aaKnown RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 PTENP60484 403 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 TMEM62Q0P6H9 643 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 STRN3Q13033 797 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 BRD3Q15059 726 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 CDCA2Q69YH5 1023 aaPredicted RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 SPECC1LQ69YQ0 1117 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 C12orf56Q8IXR9 622 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 FAM186BQ8IYM0 893 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 GOLGA5Q8TBA6 731 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 CPLX3Q8WVH0 158 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 NRCAMQ92823 1304 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 EXOC4Q96A65 974 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 SAAL1Q96ER3 474 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 BICD1Q96G01 975 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 FDXACB1Q9BRP7 624 aaPredicted RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 MTG1Q9BT17 334 aaPredicted RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 BEGAINQ9BUH8 593 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 FAM49AQ9H0Q0 323 aaPredicted RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 CDHR5Q9HBB8 845 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 ARMCX3Q9UH62 379 aaPredicted RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 KCNG1Q9UIX4 513 aa11.05□□□□□ -0.64
PRAMEF4-201ENST00000235349 GRIN2DO15399 1336 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 MBLAC1A4D2B0 266 aaPredicted RBP11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 H0YCG3 227 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 HNRNPDLO14979 420 aaKnown RBP11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 STX10O60499 249 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 MSCO60682 206 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 KPNA6O60684 536 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 URI1O94763 535 aaPredicted RBP11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 ASGR1P07306 291 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 ADRB2P07550 413 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 EPB41P11171 864 aaKnown RBP11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 NLRP11P59045 1033 aaKnown RBP11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 RBL2Q08999 1139 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 KCNMA1Q12791 1236 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 ARHGEF6Q15052 776 aa11.04□□□□□ -0.64
PRAMEF4-201ENST00000235349 LHX8Q68G74 356 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms