RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Atp2a1Q8R429 994 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Rpa3Q9CQ71 121 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Capn9Q9D805 690 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ggps1Q9WTN0 300 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Rps6ka2Q9WUT3 733 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Tnni1Q9WUZ5 187 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Map2P20357 1828 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Gm6583E9Q8Z1 469 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Eif3dO70194 548 aaKnown RBP12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 PrkcbP68404 671 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Lrrc8cQ8R502 803 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Rhobtb2Q91V93 728 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Cttnbp2nlQ99LJ0 638 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Tdrd1Q99MV1 1172 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 AticQ9CWJ9 592 aaKnown RBP12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Pramef12Q9D2F1 463 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Iqcf1Q9D9K8 182 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Tsc1Q9EP53 1161 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Gtf2ird1Q9JI57 1104 aaKnown RBP12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 C5P06684 1680 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Actr2P61161 394 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Zbtb8osQ505B7 168 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Prpsap2Q8R574 369 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 NelfcdQ922L6 591 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Fam111aQ9D2L9 613 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ubiad1Q9DC60 336 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Prl2c5Q9JLV9 222 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Trpc5Q9QX29 975 aa12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 N4bp2F8VQG7 1678 aaKnown RBP12.01□□□□□ -0.49
Trim9-202ENSMUST00000110522 Gm29133A0A1B0GT72 266 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Gm382B1AXN3 1250 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Gm1758F6VZZ1 202 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Rbm46P86049 533 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Pstpip1P97814 415 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ece1Q4PZA2 769 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Hsph1Q61699 858 aaKnown RBP12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Sin3bQ62141 1098 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ano5Q75UR0 904 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Them5Q9CQJ0 248 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Atp8b5A3FIN4 1183 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Mtco1P00397 514 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Kif11Q6P9P6 1052 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 AmphQ7TQF7 686 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Thoc1Q8R3N6 657 aaKnown RBP12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Smyd3Q9CWR2 428 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Elp3Q9CZX0 547 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Cog1Q9Z160 980 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Krt27Q9Z320 448 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 H2afxP27661 143 aaKnown RBP12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Vcam1P29533 739 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Smad1P70340 465 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 FerP70451 823 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 ItkQ03526 625 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Sult1d1Q3UZZ6 295 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 FancbQ5XJY6 703 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Nuak1Q641K5 658 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Tmco4Q91WU4 631 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Polr3eQ9CZT4 710 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Rmi1Q9D4G9 616 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ddx20Q9JJY4 825 aaKnown RBP12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Tfr2Q9JKX3 798 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ripor3A1L3T7 938 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ppfia4B8QI36 1187 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Cdr1E9Q0B4 517 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Casp2P29594 452 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Stmn2P55821 179 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ccdc110Q3V125 848 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Mcf2lQ64096 1149 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Tspyl5Q69ZB3 406 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Mindy1Q76LS9 468 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Lrrc1Q80VQ1 524 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 RbsnQ80Y56 783 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 OtoaQ8K561 1137 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Znrd1-asQ8R0E5 213 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Abcg3Q99P81 650 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 Dnajc19Q9CQV7 116 aa12□□□□□ -0.49
Trim9-202ENSMUST00000110522 XdhQ00519 1335 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Cep85lA0A1W2P884 806 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Olfr67F8VPJ8 320 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Usp17ldG5E8G2 545 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Usp17lcG5E8I7 545 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Psmc4P54775 418 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Atp2a3Q64518 1038 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Recql4Q75NR7 1216 aaKnown RBP11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Tmem117Q8BH18 514 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Calcoco1Q8CGU1 691 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Pdik1lQ8QZR7 341 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Upb1Q8VC97 393 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ric1Q69ZJ7 1422 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Gm5795E9PZN8 263 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Gm8298J3QPI0 401 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Fcer2P20693 331 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Arl4aP61213 200 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Lrriq3Q14DL3 633 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 SpertQ32MG2 446 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Tmtc1Q3UV71 942 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Ifnl2Q4VK74 193 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Snx19Q6P4T1 997 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Impg2Q80XH2 1243 aa11.99□□□□□ -0.49
Trim9-202ENSMUST00000110522 Snip1Q8BIZ6 383 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms