Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm25239-201ENSMUST00000174915 86 ntBASIC41.74■■■■■ 4.27
Upb1Q8VC97 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
Upb1Q8VC97 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Upb1Q8VC97 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Upb1Q8VC97 Gm15042-201ENSMUST00000120212 883 ntBASIC36.69■■■■□ 3.46
Upb1Q8VC97 Gm24109-201ENSMUST00000175489 103 ntBASIC36.06■■■■□ 3.36
Upb1Q8VC97 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
Upb1Q8VC97 Gm15045-201ENSMUST00000117359 883 ntBASIC35.88■■■■□ 3.33
Upb1Q8VC97 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
Upb1Q8VC97 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Upb1Q8VC97 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.23■■■■□ 3.23
Upb1Q8VC97 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Upb1Q8VC97 Gm23366-201ENSMUST00000175022 89 ntBASIC34.92■■■■□ 3.18
Upb1Q8VC97 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Upb1Q8VC97 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Upb1Q8VC97 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.3■■■■□ 3.08
Upb1Q8VC97 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Upb1Q8VC97 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
Upb1Q8VC97 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Upb1Q8VC97 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Upb1Q8VC97 Psd-208ENSMUST00000224556 2034 ntBASIC33.84■■■■□ 3.01
Upb1Q8VC97 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.84■■■■□ 3.01
Upb1Q8VC97 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
Upb1Q8VC97 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
Upb1Q8VC97 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.68■■■□□ 2.98
Upb1Q8VC97 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Upb1Q8VC97 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.64■■■□□ 2.98
Upb1Q8VC97 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.55■■■□□ 2.96
Upb1Q8VC97 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.41■■■□□ 2.94
Upb1Q8VC97 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.36■■■□□ 2.93
Upb1Q8VC97 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.18■■■□□ 2.9
Upb1Q8VC97 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Upb1Q8VC97 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.01■■■□□ 2.87
Upb1Q8VC97 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Upb1Q8VC97 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Upb1Q8VC97 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Upb1Q8VC97 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.89■■■□□ 2.86
Upb1Q8VC97 Gm25238-201ENSMUST00000174914 89 ntBASIC32.86■■■□□ 2.85
Upb1Q8VC97 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Upb1Q8VC97 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Upb1Q8VC97 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Upb1Q8VC97 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Upb1Q8VC97 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.44■■■□□ 2.78
Upb1Q8VC97 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Upb1Q8VC97 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
Upb1Q8VC97 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.24■■■□□ 2.75
Upb1Q8VC97 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Upb1Q8VC97 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Upb1Q8VC97 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Upb1Q8VC97 Gm27325-201ENSMUST00000175467 74 ntBASIC32.18■■■□□ 2.74
Upb1Q8VC97 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.08■■■□□ 2.73
Upb1Q8VC97 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Upb1Q8VC97 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Upb1Q8VC97 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.95■■■□□ 2.71
Upb1Q8VC97 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Upb1Q8VC97 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.85■■■□□ 2.69
Upb1Q8VC97 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Upb1Q8VC97 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.83■■■□□ 2.69
Upb1Q8VC97 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
Upb1Q8VC97 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Upb1Q8VC97 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Upb1Q8VC97 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.66■■■□□ 2.66
Upb1Q8VC97 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.65■■■□□ 2.66
Upb1Q8VC97 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Upb1Q8VC97 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Upb1Q8VC97 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Upb1Q8VC97 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Upb1Q8VC97 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Upb1Q8VC97 Rab21-202ENSMUST00000218831 843 ntBASIC31.49■■■□□ 2.63
Upb1Q8VC97 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Upb1Q8VC97 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Upb1Q8VC97 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Upb1Q8VC97 Gm25262-201ENSMUST00000174934 133 ntBASIC31.43■■■□□ 2.62
Upb1Q8VC97 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Upb1Q8VC97 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Upb1Q8VC97 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.37■■■□□ 2.61
Upb1Q8VC97 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.32■■■□□ 2.6
Upb1Q8VC97 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Upb1Q8VC97 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.24■■■□□ 2.59
Upb1Q8VC97 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Upb1Q8VC97 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Upb1Q8VC97 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Upb1Q8VC97 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.14■■■□□ 2.57
Upb1Q8VC97 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Upb1Q8VC97 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Upb1Q8VC97 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.98■■■□□ 2.55
Upb1Q8VC97 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Upb1Q8VC97 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Upb1Q8VC97 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Upb1Q8VC97 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.93■■■□□ 2.54
Upb1Q8VC97 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.92■■■□□ 2.54
Upb1Q8VC97 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Upb1Q8VC97 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Upb1Q8VC97 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Upb1Q8VC97 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.77■■■□□ 2.52
Upb1Q8VC97 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Upb1Q8VC97 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Upb1Q8VC97 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.71■■■□□ 2.51
Upb1Q8VC97 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Upb1Q8VC97 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms