Protein–RNA interactions for Protein: A0A1B0GT72

Gm29133, Predicted gene 29133, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29133A0A1B0GT72 Gm25239-201ENSMUST00000174915 86 ntBASIC35.84■■■■□ 3.33
Gm29133A0A1B0GT72 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Gm29133A0A1B0GT72 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Gm29133A0A1B0GT72 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.86■■■■□ 3.01
Gm29133A0A1B0GT72 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Gm29133A0A1B0GT72 Psd-208ENSMUST00000224556 2034 ntBASIC32.73■■■□□ 2.83
Gm29133A0A1B0GT72 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Gm29133A0A1B0GT72 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Gm29133A0A1B0GT72 Gm15042-201ENSMUST00000120212 883 ntBASIC32.1■■■□□ 2.73
Gm29133A0A1B0GT72 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Gm29133A0A1B0GT72 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Gm29133A0A1B0GT72 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Gm29133A0A1B0GT72 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gm29133A0A1B0GT72 Gm15045-201ENSMUST00000117359 883 ntBASIC31.51■■■□□ 2.63
Gm29133A0A1B0GT72 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.51■■■□□ 2.63
Gm29133A0A1B0GT72 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Gm29133A0A1B0GT72 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Gm29133A0A1B0GT72 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Gm29133A0A1B0GT72 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Gm29133A0A1B0GT72 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Gm29133A0A1B0GT72 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Gm29133A0A1B0GT72 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Gm29133A0A1B0GT72 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Gm29133A0A1B0GT72 Gm24109-201ENSMUST00000175489 103 ntBASIC30.68■■■□□ 2.5
Gm29133A0A1B0GT72 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Gm29133A0A1B0GT72 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
Gm29133A0A1B0GT72 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Gm29133A0A1B0GT72 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Gm29133A0A1B0GT72 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.57■■■□□ 2.48
Gm29133A0A1B0GT72 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Gm29133A0A1B0GT72 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Gm29133A0A1B0GT72 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.38■■■□□ 2.45
Gm29133A0A1B0GT72 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Gm29133A0A1B0GT72 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Gm29133A0A1B0GT72 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Gm29133A0A1B0GT72 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Gm29133A0A1B0GT72 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Gm29133A0A1B0GT72 Gm23366-201ENSMUST00000175022 89 ntBASIC30.05■■■□□ 2.4
Gm29133A0A1B0GT72 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Gm29133A0A1B0GT72 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.99■■■□□ 2.39
Gm29133A0A1B0GT72 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Gm29133A0A1B0GT72 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Gm29133A0A1B0GT72 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.84■■■□□ 2.37
Gm29133A0A1B0GT72 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.82■■■□□ 2.37
Gm29133A0A1B0GT72 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Gm29133A0A1B0GT72 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Gm29133A0A1B0GT72 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Gm29133A0A1B0GT72 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Gm29133A0A1B0GT72 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.51■■■□□ 2.31
Gm29133A0A1B0GT72 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Gm29133A0A1B0GT72 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Gm29133A0A1B0GT72 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Gm29133A0A1B0GT72 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.36■■■□□ 2.29
Gm29133A0A1B0GT72 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Gm29133A0A1B0GT72 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Gm29133A0A1B0GT72 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.07■■■□□ 2.24
Gm29133A0A1B0GT72 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Gm29133A0A1B0GT72 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.99■■■□□ 2.23
Gm29133A0A1B0GT72 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Gm29133A0A1B0GT72 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Gm29133A0A1B0GT72 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Gm29133A0A1B0GT72 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Gm29133A0A1B0GT72 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
Gm29133A0A1B0GT72 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Gm29133A0A1B0GT72 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Gm29133A0A1B0GT72 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Gm29133A0A1B0GT72 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Gm29133A0A1B0GT72 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Gm29133A0A1B0GT72 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Gm29133A0A1B0GT72 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Gm29133A0A1B0GT72 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
Gm29133A0A1B0GT72 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Gm29133A0A1B0GT72 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Gm29133A0A1B0GT72 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Gm29133A0A1B0GT72 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Gm29133A0A1B0GT72 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.44■■■□□ 2.14
Gm29133A0A1B0GT72 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Gm29133A0A1B0GT72 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Gm29133A0A1B0GT72 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Gm29133A0A1B0GT72 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.33■■■□□ 2.13
Gm29133A0A1B0GT72 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Gm29133A0A1B0GT72 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Gm29133A0A1B0GT72 Gm27325-201ENSMUST00000175467 74 ntBASIC28.27■■■□□ 2.12
Gm29133A0A1B0GT72 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Gm29133A0A1B0GT72 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Gm29133A0A1B0GT72 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Gm29133A0A1B0GT72 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Gm29133A0A1B0GT72 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Gm29133A0A1B0GT72 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
Gm29133A0A1B0GT72 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Gm29133A0A1B0GT72 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Gm29133A0A1B0GT72 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Gm29133A0A1B0GT72 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Gm29133A0A1B0GT72 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Gm29133A0A1B0GT72 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Gm29133A0A1B0GT72 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Gm29133A0A1B0GT72 Gm25238-201ENSMUST00000174914 89 ntBASIC28.02■■■□□ 2.08
Gm29133A0A1B0GT72 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Gm29133A0A1B0GT72 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.96■■■□□ 2.07
Gm29133A0A1B0GT72 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms