RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Ccdc152E9PX14 254 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 BC049352E9Q2Z6 85 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Slc39a2G3X943 309 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Rgs9O54828 675 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 MarcksP26645 309 aaKnown RBP17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Dnm1P39053 867 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Casd1Q7TN73 797 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Rspry1Q8BVR6 576 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Kank2Q8BX02 843 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Mknk2Q8CDB0 459 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Stoml1Q8CI66 399 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Chmp4cQ9D7F7 232 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Pebp4Q9D9G2 242 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Zfp236S4R299 1847 aa17.04■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Gm9573F7C950 1606 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Klhdc7bA0A286YD60 1263 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Samd1D3YXK1 519 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Gimd1E9PW74 217 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Actn3O88990 900 aaKnown RBP17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Lsp1P19973 330 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Hoxd8P23463 289 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Dpep1P31428 410 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Nudt1P53368 156 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Paxbp1P58501 919 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Mark3Q03141 753 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Klra7Q60654 280 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Shkbp1Q6P7W2 704 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Stxbp5Q8K400 1152 aaKnown RBP17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Mcrs1Q99L90 462 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Ndufaf7Q9CWG8 436 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Lman1Q9D0F3 517 aa17.03■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 A0A0U1RNP2 1173 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Grik3B1AS29 919 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Gprin2D3Z1D7 455 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 P01878 344 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Aimp1P31230 310 aaKnown RBP17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Gpr15Q0VDU3 360 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Psg29Q3URN6 468 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Ppp1r13bQ62415 1087 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Tbc1d14Q8CGA2 694 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Cchcr1Q8K2I2 770 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Tubb6Q922F4 447 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 B4galt5Q9JMK0 388 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 Clcn5Q9WVD4 746 aa17.02■□□□□ 0.32
Sf3b6-201ENSMUST00000046207 AdprhP54923 362 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Perm1Q149B8 807 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Gm29609Q3UU56 907 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 P4ha1Q60715 534 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Kcnk12Q76M80 430 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Lats2Q7TSJ6 1042 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Lrfn2Q80TG9 788 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Acnat2Q8BGG9 420 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Gtf3c2Q8BL74 907 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Plekhh3Q8VCE9 796 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Csde1Q91W50 798 aaKnown RBP17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Polr3fQ921X6 316 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Lman2Q9DBH5 358 aaKnown RBP17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Doc2gQ9ESN1 387 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Stxbp4Q9WV89 557 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 F8Q06194 2319 aa17.01■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Veph1A1A535 833 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 RaxO35602 342 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Surf1P09925 306 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Ca8P28651 291 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Tgfbrap1Q3UR70 860 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Adamts18Q4VC17 1219 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Slc26a2Q62273 739 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Mical2Q8BML1 960 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 GancQ8BVW0 898 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Tsr2Q8C8T8 191 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Frat2Q8K025 231 aa17■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 FechP22315 420 aaKnown RBP16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 EvcP57680 1005 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Prss55Q14BX2 321 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Smcr8Q3UMB5 935 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Shroom1Q5SX79 823 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 RabepkQ8VCH5 380 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Terf2ipQ91VL8 393 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Ackr4Q924I3 350 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Ophn1Q99J31 802 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Ggt7Q99JP7 662 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Slc12a9Q99MR3 914 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 NcdnQ9Z0E0 729 aa16.99■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Myh11O08638 1972 aa16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Fam205aA2APU8 1308 aa16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Cdr2lA2A6T1 465 aa16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Vmn2r121A2BE32 847 aa16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Ppfia4B8QI36 1187 aa16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Stk11ipQ3TAA7 1072 aa16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Utp18Q5SSI6 552 aaKnown RBP16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Robo4Q8C310 1012 aa16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 CmasQ99KK2 432 aaKnown RBP16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 LlphQ9D945 130 aaKnown RBP16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Angptl2Q9R045 493 aa16.98■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Cntnap5aQ0V8T9 1304 aa16.97■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Plcb2A3KGF7 1181 aa16.97■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 DctP29812 517 aa16.97■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Ptpn5P54830 541 aa16.97■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Gp1bbP56400 206 aa16.97■□□□□ 0.31
Sf3b6-201ENSMUST00000046207 Hoxd13P70217 339 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms