Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Gm25239-201ENSMUST00000174915 86 ntBASIC40.16■■■■■ 4.02
NcdnQ9Z0E0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
NcdnQ9Z0E0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
NcdnQ9Z0E0 Gm24109-201ENSMUST00000175489 103 ntBASIC35.21■■■■□ 3.23
NcdnQ9Z0E0 Gm15042-201ENSMUST00000120212 883 ntBASIC34.45■■■■□ 3.11
NcdnQ9Z0E0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
NcdnQ9Z0E0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.94■■■■□ 3.02
NcdnQ9Z0E0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
NcdnQ9Z0E0 Gm23366-201ENSMUST00000175022 89 ntBASIC33.51■■■□□ 2.95
NcdnQ9Z0E0 Gm15045-201ENSMUST00000117359 883 ntBASIC33.48■■■□□ 2.95
NcdnQ9Z0E0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
NcdnQ9Z0E0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.03■■■□□ 2.88
NcdnQ9Z0E0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.81■■■□□ 2.84
NcdnQ9Z0E0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
NcdnQ9Z0E0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
NcdnQ9Z0E0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.59■■■□□ 2.81
NcdnQ9Z0E0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
NcdnQ9Z0E0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.06■■■□□ 2.72
NcdnQ9Z0E0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NcdnQ9Z0E0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
NcdnQ9Z0E0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NcdnQ9Z0E0 Gm25238-201ENSMUST00000174914 89 ntBASIC31.87■■■□□ 2.69
NcdnQ9Z0E0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
NcdnQ9Z0E0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
NcdnQ9Z0E0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
NcdnQ9Z0E0 Gm25262-201ENSMUST00000174934 133 ntBASIC30.99■■■□□ 2.55
NcdnQ9Z0E0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
NcdnQ9Z0E0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.81■■■□□ 2.52
NcdnQ9Z0E0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NcdnQ9Z0E0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.69■■■□□ 2.5
NcdnQ9Z0E0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.67■■■□□ 2.5
NcdnQ9Z0E0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.55■■■□□ 2.48
NcdnQ9Z0E0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NcdnQ9Z0E0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.54■■■□□ 2.48
NcdnQ9Z0E0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NcdnQ9Z0E0 Gm26115-201ENSMUST00000175605 87 ntBASIC30.51■■■□□ 2.47
NcdnQ9Z0E0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NcdnQ9Z0E0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.45■■■□□ 2.47
NcdnQ9Z0E0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NcdnQ9Z0E0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
NcdnQ9Z0E0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
NcdnQ9Z0E0 Gm8109-201ENSMUST00000194076 746 ntBASIC30.21■■■□□ 2.43
NcdnQ9Z0E0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NcdnQ9Z0E0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.17■■■□□ 2.42
NcdnQ9Z0E0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
NcdnQ9Z0E0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NcdnQ9Z0E0 Gm27325-201ENSMUST00000175467 74 ntBASIC30.02■■■□□ 2.4
NcdnQ9Z0E0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30■■■□□ 2.39
NcdnQ9Z0E0 Rab21-202ENSMUST00000218831 843 ntBASIC29.98■■■□□ 2.39
NcdnQ9Z0E0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
NcdnQ9Z0E0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
NcdnQ9Z0E0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
NcdnQ9Z0E0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
NcdnQ9Z0E0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.75■■■□□ 2.35
NcdnQ9Z0E0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
NcdnQ9Z0E0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NcdnQ9Z0E0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.54■■■□□ 2.32
NcdnQ9Z0E0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.51■■■□□ 2.31
NcdnQ9Z0E0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.47■■■□□ 2.31
NcdnQ9Z0E0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NcdnQ9Z0E0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
NcdnQ9Z0E0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NcdnQ9Z0E0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NcdnQ9Z0E0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
NcdnQ9Z0E0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
NcdnQ9Z0E0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
NcdnQ9Z0E0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
NcdnQ9Z0E0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.15■■■□□ 2.26
NcdnQ9Z0E0 Gm24804-201ENSMUST00000174982 85 ntBASIC29.1■■■□□ 2.25
NcdnQ9Z0E0 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.04■■■□□ 2.24
NcdnQ9Z0E0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
NcdnQ9Z0E0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
NcdnQ9Z0E0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
NcdnQ9Z0E0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.94■■■□□ 2.22
NcdnQ9Z0E0 Psd-208ENSMUST00000224556 2034 ntBASIC28.9■■■□□ 2.22
NcdnQ9Z0E0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.86■■■□□ 2.21
NcdnQ9Z0E0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
NcdnQ9Z0E0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NcdnQ9Z0E0 Gm27322-201ENSMUST00000184007 104 ntBASIC28.79■■■□□ 2.2
NcdnQ9Z0E0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.77■■■□□ 2.2
NcdnQ9Z0E0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
NcdnQ9Z0E0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.75■■■□□ 2.19
NcdnQ9Z0E0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
NcdnQ9Z0E0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
NcdnQ9Z0E0 Zfp131-205ENSMUST00000223812 663 ntBASIC28.66■■■□□ 2.18
NcdnQ9Z0E0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
NcdnQ9Z0E0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.65■■■□□ 2.18
NcdnQ9Z0E0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
NcdnQ9Z0E0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
NcdnQ9Z0E0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
NcdnQ9Z0E0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NcdnQ9Z0E0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NcdnQ9Z0E0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NcdnQ9Z0E0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.16
NcdnQ9Z0E0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.49■■■□□ 2.15
NcdnQ9Z0E0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
NcdnQ9Z0E0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.48■■■□□ 2.15
NcdnQ9Z0E0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NcdnQ9Z0E0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.47■■■□□ 2.15
NcdnQ9Z0E0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.44■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms