RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Gm35339A0A140LHH9 1649 aa36.88■■■■□ 3.49
Sf3b6-201ENSMUST00000046207 NischQ80TM9 1593 aa36.05■■■■□ 3.36
Sf3b6-201ENSMUST00000046207 Abcc8B2RUS7 1588 aa35.08■■■■□ 3.21
Sf3b6-201ENSMUST00000046207 Abcc9P70170 1546 aa34.93■■■■□ 3.18
Sf3b6-201ENSMUST00000046207 ScribQ80U72 1612 aa34.25■■■■□ 3.07
Sf3b6-201ENSMUST00000046207 NacadQ5SWP3 1504 aa33.02■■■□□ 2.88
Sf3b6-201ENSMUST00000046207 Kdm5dQ62240 1548 aa32.92■■■□□ 2.86
Sf3b6-201ENSMUST00000046207 Sycp2Q9CUU3 1500 aa32.43■■■□□ 2.78
Sf3b6-201ENSMUST00000046207 Dnajc5bQ9CQ94 199 aa32.18■■■□□ 2.74
Sf3b6-201ENSMUST00000046207 Dcaf1Q80TR8 1506 aa32.16■■■□□ 2.74
Sf3b6-201ENSMUST00000046207 BicraF8VPZ9 1578 aa32.12■■■□□ 2.73
Sf3b6-201ENSMUST00000046207 Rb1cc1Q9ESK9 1588 aa31.35■■■□□ 2.61
Sf3b6-201ENSMUST00000046207 Thoc2B1AZI6 1594 aaKnown RBP31.33■■■□□ 2.61
Sf3b6-201ENSMUST00000046207 Pds5bQ4VA53 1446 aaKnown RBP31.28■■■□□ 2.6
Sf3b6-201ENSMUST00000046207 Crybg2B7ZCC2 1516 aa30.89■■■□□ 2.54
Sf3b6-201ENSMUST00000046207 Atad2bE9Q166 1460 aaKnown RBP30.88■■■□□ 2.53
Sf3b6-201ENSMUST00000046207 Baz1aO88379 1555 aa30.88■■■□□ 2.53
Sf3b6-201ENSMUST00000046207 Ccdc180J3QNE4 1664 aa30.8■■■□□ 2.52
Sf3b6-201ENSMUST00000046207 Cc2d2aQ8CFW7 1633 aa30.75■■■□□ 2.51
Sf3b6-201ENSMUST00000046207 Ercc6F8VPZ5 1481 aa30.56■■■□□ 2.48
Sf3b6-201ENSMUST00000046207 Zcchc6Q5BLK4 1491 aaKnown RBP30.48■■■□□ 2.47
Sf3b6-201ENSMUST00000046207 Fam135aQ6NS59 1506 aa30.47■■■□□ 2.47
Sf3b6-201ENSMUST00000046207 Smarca2Q6DIC0 1577 aa30.45■■■□□ 2.47
Sf3b6-201ENSMUST00000046207 Rhox8Q6VSS7 320 aa30.36■■■□□ 2.45
Sf3b6-201ENSMUST00000046207 Smarca4Q3TKT4 1613 aaKnown RBP30.36■■■□□ 2.45
Sf3b6-201ENSMUST00000046207 Iqgap2Q3UQ44 1575 aa30.28■■■□□ 2.44
Sf3b6-201ENSMUST00000046207 Wdr62Q3U3T8 1523 aa30.16■■■□□ 2.42
Sf3b6-201ENSMUST00000046207 Frmpd1A2AKB4 1549 aa30.12■■■□□ 2.41
Sf3b6-201ENSMUST00000046207 Cecr2E9Q2Z1 1453 aa30.12■■■□□ 2.41
Sf3b6-201ENSMUST00000046207 Baz1bQ9Z277 1479 aa30.1■■■□□ 2.41
Sf3b6-201ENSMUST00000046207 Phldb1Q6PDH0 1371 aaKnown RBP30.07■■■□□ 2.4
Sf3b6-201ENSMUST00000046207 Ubl4bQ9CQ84 188 aa29.77■■■□□ 2.36
Sf3b6-201ENSMUST00000046207 Dnajc5P60904 198 aa29.73■■■□□ 2.35
Sf3b6-201ENSMUST00000046207 Mrc2Q64449 1479 aa29.72■■■□□ 2.35
Sf3b6-201ENSMUST00000046207 Unc13aQ4KUS2 1712 aa29.69■■■□□ 2.34
Sf3b6-201ENSMUST00000046207 Trim41Q5NCC3 630 aa29.35■■■□□ 2.29
Sf3b6-201ENSMUST00000046207 CftrP26361 1476 aa29.3■■■□□ 2.28
Sf3b6-201ENSMUST00000046207 Cttnbp2B9EJA2 1648 aa29.25■■■□□ 2.27
Sf3b6-201ENSMUST00000046207 Synj1Q8CHC4 1574 aa29.15■■■□□ 2.26
Sf3b6-201ENSMUST00000046207 Lrriq1Q0P5X1 1673 aa29.12■■■□□ 2.25
Sf3b6-201ENSMUST00000046207 Rsf1E9PWW9 1441 aaKnown RBP29■■■□□ 2.23
Sf3b6-201ENSMUST00000046207 Brd4Q9ESU6 1400 aaKnown RBP28.98■■■□□ 2.23
Sf3b6-201ENSMUST00000046207 Cux2P70298 1426 aa28.92■■■□□ 2.22
Sf3b6-201ENSMUST00000046207 Kif21aQ9QXL2 1672 aa28.85■■■□□ 2.21
Sf3b6-201ENSMUST00000046207 Rtl1Q7M732 1744 aa28.8■■■□□ 2.2
Sf3b6-201ENSMUST00000046207 Kif15Q6P9L6 1387 aa28.76■■■□□ 2.2
Sf3b6-201ENSMUST00000046207 Shroom2A2ALU4 1481 aa28.76■■■□□ 2.19
Sf3b6-201ENSMUST00000046207 Eif4g3Q80XI3 1579 aaKnown RBP28.7■■■□□ 2.18
Sf3b6-201ENSMUST00000046207 Lamc3Q9R0B6 1581 aa28.59■■■□□ 2.17
Sf3b6-201ENSMUST00000046207 Esf1Q3V1V3 845 aaKnown RBP28.58■■■□□ 2.17
Sf3b6-201ENSMUST00000046207 Ccdc136Q3TVA9 1136 aa28.57■■■□□ 2.16
Sf3b6-201ENSMUST00000046207 Npm1Q61937 292 aaKnown RBP28.49■■■□□ 2.15
Sf3b6-201ENSMUST00000046207 Col17a1Q07563 1470 aa28.47■■■□□ 2.15
Sf3b6-201ENSMUST00000046207 Urb2E9Q7L1 1524 aaKnown RBP28.4■■■□□ 2.14
Sf3b6-201ENSMUST00000046207 Cep164Q5DU05 1446 aa28.39■■■□□ 2.14
Sf3b6-201ENSMUST00000046207 Plb1Q3TTY0 1478 aa28.3■■■□□ 2.12
Sf3b6-201ENSMUST00000046207 Dhx29Q6PGC1 1365 aaKnown RBP28.26■■■□□ 2.12
Sf3b6-201ENSMUST00000046207 Pabpn1Q8CCS6 302 aaKnown RBP28.25■■■□□ 2.11
Sf3b6-201ENSMUST00000046207 Top2bQ64511 1612 aa28.25■■■□□ 2.11
Sf3b6-201ENSMUST00000046207 LrpprcQ6PB66 1392 aaKnown RBP28.11■■■□□ 2.09
Sf3b6-201ENSMUST00000046207 Crocc2F6XLV1 1638 aa28.11■■■□□ 2.09
Sf3b6-201ENSMUST00000046207 Ccdc18Q640L5 1455 aa28.1■■■□□ 2.09
Sf3b6-201ENSMUST00000046207 TnnQ80Z71 1560 aa28.09■■■□□ 2.09
Sf3b6-201ENSMUST00000046207 Rusc2Q80U22 1514 aa28.07■■■□□ 2.08
Sf3b6-201ENSMUST00000046207 Zcchc11B2RX14 1644 aaKnown RBP28.02■■■□□ 2.08
Sf3b6-201ENSMUST00000046207 Il27Q8K3I6 234 aa28.01■■■□□ 2.07
Sf3b6-201ENSMUST00000046207 Ift140E9PY46 1464 aa28.01■■■□□ 2.07
Sf3b6-201ENSMUST00000046207 Camsap1A2AHC3 1581 aa27.99■■■□□ 2.07
Sf3b6-201ENSMUST00000046207 Pelp1Q9DBD5 1123 aaKnown RBP27.94■■■□□ 2.06
Sf3b6-201ENSMUST00000046207 PogzQ8BZH4 1409 aaKnown RBP27.91■■■□□ 2.06
Sf3b6-201ENSMUST00000046207 Duox2A2AQ99 1517 aa27.75■■■□□ 2.03
Sf3b6-201ENSMUST00000046207 Disp1Q3TDN0 1521 aa27.75■■■□□ 2.03
Sf3b6-201ENSMUST00000046207 Golga3P55937 1487 aa27.75■■■□□ 2.03
Sf3b6-201ENSMUST00000046207 Setd1bQ8CFT2 1985 aa27.66■■■□□ 2.02
Sf3b6-201ENSMUST00000046207 Nup160Q9Z0W3 1402 aaKnown RBP27.65■■■□□ 2.02
Sf3b6-201ENSMUST00000046207 Pcdh10E9PXQ7 1057 aa27.64■■■□□ 2.02
Sf3b6-201ENSMUST00000046207 Cc2d2bA0A286YDU8 1405 aa27.61■■■□□ 2.01
Sf3b6-201ENSMUST00000046207 Adgrl3Q80TS3 1537 aa27.59■■■□□ 2.01
Sf3b6-201ENSMUST00000046207 Arhgef5E9Q7D5 1581 aa27.59■■■□□ 2.01
Sf3b6-201ENSMUST00000046207 Pbrm1Q8BSQ9 1634 aaKnown RBP27.58■■■□□ 2.01
Sf3b6-201ENSMUST00000046207 Fmn1Q05860 1466 aa27.57■■■□□ 2
Sf3b6-201ENSMUST00000046207 Grin2bQ01097 1482 aa27.55■■■□□ 2
Sf3b6-201ENSMUST00000046207 Samd9lQ69Z37 1561 aa27.54■■■□□ 2
Sf3b6-201ENSMUST00000046207 Cngb1E1AZ71 1325 aa27.52■■■□□ 2
Sf3b6-201ENSMUST00000046207 PtprkP35822 1457 aa27.49■■□□□ 1.99
Sf3b6-201ENSMUST00000046207 Cep170Q6A065 1588 aa27.46■■□□□ 1.99
Sf3b6-201ENSMUST00000046207 Gapvd1Q6PAR5 1458 aa27.41■■□□□ 1.98
Sf3b6-201ENSMUST00000046207 Gm156Q58A37 223 aa27.41■■□□□ 1.98
Sf3b6-201ENSMUST00000046207 Efcab5A0JP43 1406 aa27.41■■□□□ 1.98
Sf3b6-201ENSMUST00000046207 Fgd6Q69ZL1 1399 aa27.4■■□□□ 1.98
Sf3b6-201ENSMUST00000046207 PtprtQ99M80 1454 aa27.39■■□□□ 1.98
Sf3b6-201ENSMUST00000046207 AqrQ8CFQ3 1481 aaKnown RBP27.38■■□□□ 1.97
Sf3b6-201ENSMUST00000046207 Ttbk1Q6PCN3 1308 aa27.35■■□□□ 1.97
Sf3b6-201ENSMUST00000046207 Grin2aP35436 1464 aa27.34■■□□□ 1.97
Sf3b6-201ENSMUST00000046207 Rad54l2Q99NG0 1466 aa27.34■■□□□ 1.97
Sf3b6-201ENSMUST00000046207 Magi3Q9EQJ9 1476 aa27.33■■□□□ 1.97
Sf3b6-201ENSMUST00000046207 Abcc1O35379 1528 aa27.21■■□□□ 1.95
Sf3b6-201ENSMUST00000046207 Pprc1Q6NZN1 1644 aa27.19■■□□□ 1.94
Sf3b6-201ENSMUST00000046207 Gpatch8A2A6A1 1505 aa27.17■■□□□ 1.94
Sf3b6-201ENSMUST00000046207 Ythdc2B2RR83 1445 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms