RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Rasgrp2Q9QUG9 608 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 BcamQ9R069 622 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Rps6ka2Q9WUT3 733 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Mrc1Q61830 1456 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gsg1l2M0QWL6 290 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Trappc3O55013 180 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Msh3P13705 1091 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Dph1Q5NCQ5 438 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cnnm4Q69ZF7 771 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Nyap1Q6PFX7 833 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Wdr27Q8C5V5 780 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Arfip2Q8K221 341 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 RnpepQ8VCT3 650 aaKnown RBP11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Pomgnt1Q91X88 660 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Vps36Q91XD6 386 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gdf11Q9Z1W4 405 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gm8298J3QPI0 401 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Usp4P35123 962 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gdpd4Q3TT99 632 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 OtulinQ3UCV8 352 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ifnl2Q4VK74 193 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Nr2e1Q64104 385 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Znf507Q6ZPY5 941 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ttc16Q8C1F5 767 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Mrgprx1Q8CIP3 322 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tdrd7Q8K1H1 1086 aaKnown RBP11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tasp1Q8R1G1 420 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Rnf14Q9JI90 485 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Znf711A2ANX9 761 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gm6588E9Q3K0 461 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gm43302L7N1X8 611 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Timm44O35857 452 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Aff1O88573 1216 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Krt18P05784 423 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 AgtP11859 477 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gbp10Q000W5 611 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Fam178bQ24JP3 464 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Skap1Q3UUV5 355 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cyb5d1Q5NCY3 228 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Atp2b4Q6Q477 1205 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ddx39aQ8VDW0 427 aaKnown RBP11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cuedc2Q9CXX9 284 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Fam227aQ9D3V8 625 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Polr3cQ9D483 533 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cst12Q9DAN8 128 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Rassf7Q9DD19 359 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gja10Q9WUS4 505 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gys1Q9Z1E4 738 aaKnown RBP11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 PfasQ5SUR0 1337 aa11.37□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Pabpc1lA2A5N3 607 aaKnown RBP11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 DnttP09838 530 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Prkg1P0C605 671 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 IgflQ6B9Z0 140 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Coq6Q8R1S0 476 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cdk8Q8R3L8 464 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Mrps22Q9CXW2 359 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Fam111aQ9D2L9 613 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Speer3W4VSP1 261 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ank1Q02357 1862 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Mroh7A2AVR2 1279 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tex13cD3YU32 604 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Klc1O88447 541 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Marcksl1P28667 200 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cetn1P41209 172 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Trim43cP86449 446 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Klra9Q2TJJ8 266 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Pyroxd1Q3TMV7 498 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Trim38Q5SZ99 471 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 NostrinQ6WKZ7 506 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Q8BGN9 141 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Sh3rf3Q8C120 878 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cyp2d26Q8CIM7 500 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cd300ldQ8VCH2 221 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Lpin2Q99PI5 893 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ears2Q9CXJ1 523 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tmem192Q9CXT7 266 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 IscuQ9D7P6 168 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Mmrn2A6H6E2 943 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ftl1P29391 183 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 CstaP56567 97 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Atp13a5Q3TYU2 1216 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ccdc125Q5U465 500 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Map2k2Q63932 401 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tyw3Q8BSA9 257 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Btbd7Q8CFE5 1130 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Usp14Q9JMA1 493 aaKnown RBP11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Slc8a3S4R2P9 928 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cntnap1O54991 1385 aa11.36□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tnrc6cQ3UHC0 1690 aaKnown RBP11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gm3182K7N6T8 263 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Atp9aO70228 1047 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 GscQ02591 256 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Smg5Q6ZPY2 1017 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Nemp2Q8CB65 421 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Fkbp6Q91XW8 327 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 DcpsQ9DAR7 338 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Zfp984A2A7A2 547 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Fyb2A2A995 729 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Serpini1O35684 410 aa11.35□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Fgd3O88842 733 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms