Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm25239-201ENSMUST00000174915 86 ntBASIC43.06■■■■■ 4.48
Ddx39aQ8VDW0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
Ddx39aQ8VDW0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
Ddx39aQ8VDW0 Gm15042-201ENSMUST00000120212 883 ntBASIC37.64■■■■□ 3.62
Ddx39aQ8VDW0 Gm24109-201ENSMUST00000175489 103 ntBASIC37.29■■■■□ 3.56
Ddx39aQ8VDW0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Ddx39aQ8VDW0 Gm15045-201ENSMUST00000117359 883 ntBASIC36.8■■■■□ 3.48
Ddx39aQ8VDW0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Ddx39aQ8VDW0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Ddx39aQ8VDW0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.32■■■■□ 3.4
Ddx39aQ8VDW0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Ddx39aQ8VDW0 Gm23366-201ENSMUST00000175022 89 ntBASIC35.96■■■■□ 3.35
Ddx39aQ8VDW0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.86■■■■□ 3.33
Ddx39aQ8VDW0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Ddx39aQ8VDW0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Ddx39aQ8VDW0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Ddx39aQ8VDW0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.86■■■■□ 3.17
Ddx39aQ8VDW0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.81■■■■□ 3.16
Ddx39aQ8VDW0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ddx39aQ8VDW0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Ddx39aQ8VDW0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Ddx39aQ8VDW0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.59■■■■□ 3.13
Ddx39aQ8VDW0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.43■■■■□ 3.1
Ddx39aQ8VDW0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ddx39aQ8VDW0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ddx39aQ8VDW0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Ddx39aQ8VDW0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Ddx39aQ8VDW0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Ddx39aQ8VDW0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.06
Ddx39aQ8VDW0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ddx39aQ8VDW0 Psd-208ENSMUST00000224556 2034 ntBASIC34.1■■■■□ 3.05
Ddx39aQ8VDW0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.07■■■■□ 3.04
Ddx39aQ8VDW0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Ddx39aQ8VDW0 Gm25238-201ENSMUST00000174914 89 ntBASIC33.98■■■■□ 3.03
Ddx39aQ8VDW0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.93■■■■□ 3.02
Ddx39aQ8VDW0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ddx39aQ8VDW0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ddx39aQ8VDW0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.47■■■□□ 2.95
Ddx39aQ8VDW0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.27■■■□□ 2.92
Ddx39aQ8VDW0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ddx39aQ8VDW0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ddx39aQ8VDW0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Ddx39aQ8VDW0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.15■■■□□ 2.9
Ddx39aQ8VDW0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ddx39aQ8VDW0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ddx39aQ8VDW0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Ddx39aQ8VDW0 Gm27325-201ENSMUST00000175467 74 ntBASIC32.96■■■□□ 2.87
Ddx39aQ8VDW0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.86■■■□□ 2.85
Ddx39aQ8VDW0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.83■■■□□ 2.85
Ddx39aQ8VDW0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx39aQ8VDW0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
Ddx39aQ8VDW0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.75■■■□□ 2.83
Ddx39aQ8VDW0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ddx39aQ8VDW0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.66■■■□□ 2.82
Ddx39aQ8VDW0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ddx39aQ8VDW0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.55■■■□□ 2.8
Ddx39aQ8VDW0 Gm25262-201ENSMUST00000174934 133 ntBASIC32.53■■■□□ 2.8
Ddx39aQ8VDW0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ddx39aQ8VDW0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ddx39aQ8VDW0 Rab21-202ENSMUST00000218831 843 ntBASIC32.36■■■□□ 2.77
Ddx39aQ8VDW0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ddx39aQ8VDW0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.27■■■□□ 2.76
Ddx39aQ8VDW0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ddx39aQ8VDW0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.23■■■□□ 2.75
Ddx39aQ8VDW0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ddx39aQ8VDW0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ddx39aQ8VDW0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ddx39aQ8VDW0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ddx39aQ8VDW0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Ddx39aQ8VDW0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.02■■■□□ 2.72
Ddx39aQ8VDW0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ddx39aQ8VDW0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ddx39aQ8VDW0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
Ddx39aQ8VDW0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.96■■■□□ 2.71
Ddx39aQ8VDW0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.95■■■□□ 2.71
Ddx39aQ8VDW0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ddx39aQ8VDW0 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.94■■■□□ 2.7
Ddx39aQ8VDW0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.93■■■□□ 2.7
Ddx39aQ8VDW0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ddx39aQ8VDW0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ddx39aQ8VDW0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
Ddx39aQ8VDW0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ddx39aQ8VDW0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ddx39aQ8VDW0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ddx39aQ8VDW0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ddx39aQ8VDW0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ddx39aQ8VDW0 Gm26115-201ENSMUST00000175605 87 ntBASIC31.71■■■□□ 2.67
Ddx39aQ8VDW0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.68■■■□□ 2.66
Ddx39aQ8VDW0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ddx39aQ8VDW0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ddx39aQ8VDW0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.64■■■□□ 2.66
Ddx39aQ8VDW0 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.63■■■□□ 2.65
Ddx39aQ8VDW0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ddx39aQ8VDW0 Gm8109-201ENSMUST00000194076 746 ntBASIC31.58■■■□□ 2.65
Ddx39aQ8VDW0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ddx39aQ8VDW0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ddx39aQ8VDW0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ddx39aQ8VDW0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ddx39aQ8VDW0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.5■■■□□ 2.63
Ddx39aQ8VDW0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms