Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Gm25239-201ENSMUST00000174915 86 ntBASIC42.91■■■■■ 4.46
Atp9aO70228 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.64■■■■□ 3.94
Atp9aO70228 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Atp9aO70228 Gm15042-201ENSMUST00000120212 883 ntBASIC37.55■■■■□ 3.6
Atp9aO70228 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Atp9aO70228 Gm24109-201ENSMUST00000175489 103 ntBASIC37.18■■■■□ 3.54
Atp9aO70228 Gm15045-201ENSMUST00000117359 883 ntBASIC36.8■■■■□ 3.48
Atp9aO70228 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Atp9aO70228 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Atp9aO70228 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.24■■■■□ 3.39
Atp9aO70228 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Atp9aO70228 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
Atp9aO70228 Gm23366-201ENSMUST00000175022 89 ntBASIC35.8■■■■□ 3.32
Atp9aO70228 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Atp9aO70228 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Atp9aO70228 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Atp9aO70228 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.05■■■■□ 3.2
Atp9aO70228 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
Atp9aO70228 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Atp9aO70228 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
Atp9aO70228 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.61■■■■□ 3.13
Atp9aO70228 Psd-208ENSMUST00000224556 2034 ntBASIC34.56■■■■□ 3.12
Atp9aO70228 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
Atp9aO70228 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Atp9aO70228 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Atp9aO70228 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.46■■■■□ 3.11
Atp9aO70228 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.44■■■■□ 3.1
Atp9aO70228 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Atp9aO70228 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.27■■■■□ 3.08
Atp9aO70228 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.17■■■■□ 3.06
Atp9aO70228 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.1■■■■□ 3.05
Atp9aO70228 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Atp9aO70228 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Atp9aO70228 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Atp9aO70228 Gm25238-201ENSMUST00000174914 89 ntBASIC33.88■■■■□ 3.01
Atp9aO70228 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.74■■■□□ 2.99
Atp9aO70228 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.67■■■□□ 2.98
Atp9aO70228 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Atp9aO70228 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Atp9aO70228 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Atp9aO70228 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Atp9aO70228 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Atp9aO70228 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Atp9aO70228 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.13■■■□□ 2.89
Atp9aO70228 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.06■■■□□ 2.88
Atp9aO70228 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Atp9aO70228 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
Atp9aO70228 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33■■■□□ 2.87
Atp9aO70228 Gm27325-201ENSMUST00000175467 74 ntBASIC32.96■■■□□ 2.87
Atp9aO70228 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Atp9aO70228 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.86■■■□□ 2.85
Atp9aO70228 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Atp9aO70228 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.76■■■□□ 2.83
Atp9aO70228 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
Atp9aO70228 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Atp9aO70228 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.63■■■□□ 2.81
Atp9aO70228 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Atp9aO70228 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.56■■■□□ 2.8
Atp9aO70228 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Atp9aO70228 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Atp9aO70228 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.36■■■□□ 2.77
Atp9aO70228 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Atp9aO70228 Gm25262-201ENSMUST00000174934 133 ntBASIC32.31■■■□□ 2.76
Atp9aO70228 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Atp9aO70228 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Atp9aO70228 Rab21-202ENSMUST00000218831 843 ntBASIC32.26■■■□□ 2.75
Atp9aO70228 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Atp9aO70228 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.2■■■□□ 2.74
Atp9aO70228 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Atp9aO70228 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Atp9aO70228 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Atp9aO70228 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Atp9aO70228 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.15■■■□□ 2.74
Atp9aO70228 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Atp9aO70228 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Atp9aO70228 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Atp9aO70228 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.07■■■□□ 2.72
Atp9aO70228 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Atp9aO70228 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32■■■□□ 2.71
Atp9aO70228 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Atp9aO70228 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Atp9aO70228 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.93■■■□□ 2.7
Atp9aO70228 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.88■■■□□ 2.69
Atp9aO70228 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.87■■■□□ 2.69
Atp9aO70228 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Atp9aO70228 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Atp9aO70228 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Atp9aO70228 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
Atp9aO70228 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.76■■■□□ 2.67
Atp9aO70228 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.69■■■□□ 2.66
Atp9aO70228 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Atp9aO70228 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Atp9aO70228 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.66■■■□□ 2.66
Atp9aO70228 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Atp9aO70228 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Atp9aO70228 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Atp9aO70228 Gm26115-201ENSMUST00000175605 87 ntBASIC31.46■■■□□ 2.63
Atp9aO70228 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Atp9aO70228 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.41■■■□□ 2.62
Atp9aO70228 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms