RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeastyeast

Gene ATG29, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG29YPL166W GEA1P47102 1408 aaPredicted RBP2.89□□□□□ -1.95
ATG29YPL166W IRC4Q03036 179 aa2.89□□□□□ -1.95
ATG29YPL166W STE23Q06010 1027 aa2.89□□□□□ -1.95
ATG29YPL166W YDL144CQ07589 356 aa2.89□□□□□ -1.95
ATG29YPL166W TY1B-DR4Q07793 1604 aa2.89□□□□□ -1.95
ATG29YPL166W SCC2Q04002 1493 aa2.89□□□□□ -1.95
ATG29YPL166W REV3P14284 1504 aa2.88□□□□□ -1.95
ATG29YPL166W STU1P38198 1513 aa2.88□□□□□ -1.95
ATG29YPL166W YPS1P32329 569 aa2.88□□□□□ -1.95
ATG29YPL166W ASP1P38986 381 aaPredicted RBP2.88□□□□□ -1.95
ATG29YPL166W SPO73P40031 143 aa2.88□□□□□ -1.95
ATG29YPL166W UTP25P40498 721 aaKnown RBP2.88□□□□□ -1.95
ATG29YPL166W YNR066CP53752 436 aa2.88□□□□□ -1.95
ATG29YPL166W TSC11P40061 1430 aa2.87□□□□□ -1.95
ATG29YPL166W CBP2P03874 630 aaPredicted RBP2.87□□□□□ -1.95
ATG29YPL166W CDC37P06101 506 aaKnown RBP2.87□□□□□ -1.95
ATG29YPL166W VMA2P16140 517 aaKnown RBP2.87□□□□□ -1.95
ATG29YPL166W TRX1P22217 103 aaKnown RBP2.87□□□□□ -1.95
ATG29YPL166W INO2P26798 304 aa2.87□□□□□ -1.95
ATG29YPL166W PET100P38958 111 aa2.87□□□□□ -1.95
ATG29YPL166W RSM25P40496 264 aa2.87□□□□□ -1.95
ATG29YPL166W INA22P40576 216 aa2.87□□□□□ -1.95
ATG29YPL166W YNL247WP53852 767 aaKnown RBP2.87□□□□□ -1.95
ATG29YPL166W DIA1P54005 336 aa2.87□□□□□ -1.95
ATG29YPL166W KRE28Q04431 385 aa2.87□□□□□ -1.95
ATG29YPL166W ROM2P51862 1356 aaKnown RBP2.87□□□□□ -1.95
ATG29YPL166W MLP2P40457 1679 aa2.86□□□□□ -1.95
ATG29YPL166W RPS23AP0CX29 145 aaKnown RBP2.86□□□□□ -1.95
ATG29YPL166W RPS23BP0CX30 145 aa2.86□□□□□ -1.95
ATG29YPL166W TPM1P17536 199 aaKnown RBP2.86□□□□□ -1.95
ATG29YPL166W HPR1P17629 752 aaKnown RBP2.86□□□□□ -1.95
ATG29YPL166W ZRT1P32804 376 aa2.86□□□□□ -1.95
ATG29YPL166W SUR1P33300 382 aa2.86□□□□□ -1.95
ATG29YPL166W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
ATG29YPL166W RPC37P36121 282 aa2.86□□□□□ -1.95
ATG29YPL166W YHR035WP38769 630 aa2.86□□□□□ -1.95
ATG29YPL166W SHC1P39000 512 aa2.86□□□□□ -1.95
ATG29YPL166W SOP4P39543 234 aaPredicted RBP2.86□□□□□ -1.95
ATG29YPL166W YPL080CQ02826 108 aa2.86□□□□□ -1.95
ATG29YPL166W SNX41Q04053 625 aa2.86□□□□□ -1.95
ATG29YPL166W YPL264CQ08980 353 aa2.86□□□□□ -1.95
ATG29YPL166W VIK1Q12045 647 aa2.86□□□□□ -1.95
ATG29YPL166W NUP159P40477 1460 aa2.85□□□□□ -1.95
ATG29YPL166W YPR096CO13587 100 aa2.85□□□□□ -1.95
ATG29YPL166W RME1P32338 300 aaKnown RBP2.85□□□□□ -1.95
ATG29YPL166W CSE1P33307 960 aa2.85□□□□□ -1.95
ATG29YPL166W YKL162CP36052 402 aa2.85□□□□□ -1.95
ATG29YPL166W ECM14P38836 430 aa2.85□□□□□ -1.95
ATG29YPL166W END3P39013 349 aa2.85□□□□□ -1.95
ATG29YPL166W YFL040WP43562 540 aa2.85□□□□□ -1.95
ATG29YPL166W CAB5Q03941 241 aa2.85□□□□□ -1.95
ATG29YPL166W YPR172WQ06608 200 aa2.85□□□□□ -1.95
ATG29YPL166W SAM4Q08985 325 aaKnown RBP2.85□□□□□ -1.95
ATG29YPL166W UTP23Q12339 254 aaKnown RBP2.85□□□□□ -1.95
ATG29YPL166W ERP3Q12403 225 aa2.85□□□□□ -1.95
ATG29YPL166W PDR18P53756 1333 aa2.85□□□□□ -1.95
ATG29YPL166W MET5P47169 1442 aa2.85□□□□□ -1.95
ATG29YPL166W BPT1P14772 1559 aa2.84□□□□□ -1.95
ATG29YPL166W CDC10P25342 322 aaKnown RBP2.84□□□□□ -1.95
ATG29YPL166W KDX1P36005 433 aa2.84□□□□□ -1.95
ATG29YPL166W SPT8P38915 602 aa2.84□□□□□ -1.95
ATG29YPL166W EDC2P40023 145 aaPredicted RBP2.84□□□□□ -1.95
ATG29YPL166W YJL144WP47009 104 aa2.84□□□□□ -1.95
ATG29YPL166W ORM1P53224 222 aa2.84□□□□□ -1.95
ATG29YPL166W OKP1P53298 406 aa2.84□□□□□ -1.95
ATG29YPL166W IGO1P53897 168 aa2.84□□□□□ -1.95
ATG29YPL166W ACT1P60010 375 aaKnown RBP2.84□□□□□ -1.95
ATG29YPL166W CSI1Q04368 295 aa2.84□□□□□ -1.95
ATG29YPL166W YMR111CQ04461 462 aaPredicted RBP2.84□□□□□ -1.95
ATG29YPL166W YOR292CQ08743 309 aa2.84□□□□□ -1.95
ATG29YPL166W SWR1Q05471 1514 aa2.83□□□□□ -1.96
ATG29YPL166W ARO4P32449 370 aaKnown RBP2.83□□□□□ -1.96
ATG29YPL166W ECM4P36156 370 aa2.83□□□□□ -1.96
ATG29YPL166W SRL3P36167 246 aa2.83□□□□□ -1.96
ATG29YPL166W SSO2P39926 295 aa2.83□□□□□ -1.96
ATG29YPL166W PLP1Q04004 230 aa2.83□□□□□ -1.96
ATG29YPL166W VPS20Q04272 221 aa2.83□□□□□ -1.96
ATG29YPL166W MGR3Q04472 501 aa2.83□□□□□ -1.96
ATG29YPL166W GTO3Q04806 366 aa2.83□□□□□ -1.96
ATG29YPL166W YLR297WQ05899 129 aa2.83□□□□□ -1.96
ATG29YPL166W HRT1Q08273 121 aa2.83□□□□□ -1.96
ATG29YPL166W YPR063CQ12160 140 aa2.83□□□□□ -1.96
ATG29YPL166W RUD3Q12234 484 aaKnown RBP2.83□□□□□ -1.96
ATG29YPL166W YPR1Q12458 312 aa2.83□□□□□ -1.96
ATG29YPL166W SAC3P46674 1301 aa2.83□□□□□ -1.96
ATG29YPL166W IQG1Q12280 1495 aa2.83□□□□□ -1.96
ATG29YPL166W PDR5P33302 1511 aaKnown RBP2.83□□□□□ -1.96
ATG29YPL166W HSL1P34244 1518 aa2.83□□□□□ -1.96
ATG29YPL166W GCN2P15442 1659 aa2.82□□□□□ -1.96
ATG29YPL166W GCD2P12754 651 aaPredicted RBP2.82□□□□□ -1.96
ATG29YPL166W PET18P25362 215 aa2.82□□□□□ -1.96
ATG29YPL166W AIM29P36154 155 aa2.82□□□□□ -1.96
ATG29YPL166W SWC5P38326 303 aa2.82□□□□□ -1.96
ATG29YPL166W FET3P38993 636 aa2.82□□□□□ -1.96
ATG29YPL166W HYR1P40581 163 aaKnown RBP2.82□□□□□ -1.96
ATG29YPL166W ILM1P47155 203 aa2.82□□□□□ -1.96
ATG29YPL166W YNL040WP53960 456 aaPredicted RBP2.82□□□□□ -1.96
ATG29YPL166W SEC13Q04491 297 aaKnown RBP2.82□□□□□ -1.96
ATG29YPL166W YDR222WQ04925 415 aa2.82□□□□□ -1.96
ATG29YPL166W SSQ1Q05931 657 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms