RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W PMT5P52867 743 aa8.6□□□□□ -1.03
LIP1YMR298W NAM8Q00539 523 aaKnown RBP8.6□□□□□ -1.03
LIP1YMR298W DFG5Q05031 458 aa8.6□□□□□ -1.03
LIP1YMR298W YPL199CQ08954 240 aa8.6□□□□□ -1.03
LIP1YMR298W RLM1Q12224 676 aa8.6□□□□□ -1.03
LIP1YMR298W COX9P07255 59 aa8.59□□□□□ -1.03
LIP1YMR298W PUT3P25502 979 aaPredicted RBP8.59□□□□□ -1.03
LIP1YMR298W HOM6P31116 359 aaKnown RBP8.59□□□□□ -1.03
LIP1YMR298W TMA19P35691 167 aaKnown RBP8.59□□□□□ -1.03
LIP1YMR298W FAA3P39002 694 aa8.59□□□□□ -1.03
LIP1YMR298W YER184CP39961 794 aa8.59□□□□□ -1.03
LIP1YMR298W BAP3P41815 604 aa8.59□□□□□ -1.03
LIP1YMR298W PMT6P42934 759 aa8.59□□□□□ -1.03
LIP1YMR298W MSE1P48525 536 aa8.59□□□□□ -1.03
LIP1YMR298W CUZ1P53899 274 aa8.59□□□□□ -1.03
LIP1YMR298W PFA5Q03289 374 aa8.59□□□□□ -1.03
LIP1YMR298W MSS11Q03825 758 aa8.59□□□□□ -1.03
LIP1YMR298W SEI1Q06058 285 aa8.59□□□□□ -1.03
LIP1YMR298W AIM6Q07716 390 aa8.59□□□□□ -1.03
LIP1YMR298W HNT3Q08702 217 aa8.59□□□□□ -1.03
LIP1YMR298W RDR1Q08904 546 aa8.59□□□□□ -1.03
LIP1YMR298W CYT1P07143 309 aa8.58□□□□□ -1.04
LIP1YMR298W MRP1P10662 321 aaKnown RBP8.58□□□□□ -1.04
LIP1YMR298W STE12P13574 688 aa8.58□□□□□ -1.04
LIP1YMR298W HSP150P32478 413 aa8.58□□□□□ -1.04
LIP1YMR298W PAD1P33751 242 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
LIP1YMR298W RCN1P36054 211 aa8.58□□□□□ -1.04
LIP1YMR298W YNL208WP40159 199 aaKnown RBP8.58□□□□□ -1.04
LIP1YMR298W CUP9P41817 306 aa8.58□□□□□ -1.04
LIP1YMR298W YFR054CP43622 192 aa8.58□□□□□ -1.04
LIP1YMR298W RSM28Q03430 361 aa8.58□□□□□ -1.04
LIP1YMR298W MRPL51Q06090 140 aaPredicted RBP8.58□□□□□ -1.04
LIP1YMR298W HRT1Q08273 121 aa8.58□□□□□ -1.04
LIP1YMR298W BDS1Q08347 646 aa8.58□□□□□ -1.04
LIP1YMR298W BTS1Q12051 335 aa8.58□□□□□ -1.04
LIP1YMR298W RPP2BP02400 110 aaKnown RBP8.57□□□□□ -1.04
LIP1YMR298W GAS1P22146 559 aaKnown RBP8.57□□□□□ -1.04
LIP1YMR298W AIM17P23180 465 aaKnown RBP8.57□□□□□ -1.04
LIP1YMR298W BOS1P25385 244 aa8.57□□□□□ -1.04
LIP1YMR298W PAU2P32612 120 aa8.57□□□□□ -1.04
LIP1YMR298W MTH1P35198 433 aa8.57□□□□□ -1.04
LIP1YMR298W ANR2P36090 516 aaPredicted RBP8.57□□□□□ -1.04
LIP1YMR298W UME6P39001 836 aa8.57□□□□□ -1.04
LIP1YMR298W RPE1P46969 238 aa8.57□□□□□ -1.04
LIP1YMR298W ECL1P48235 211 aa8.57□□□□□ -1.04
LIP1YMR298W TPN1P53099 579 aa8.57□□□□□ -1.04
LIP1YMR298W ERV29P53337 310 aa8.57□□□□□ -1.04
LIP1YMR298W NUP116Q02630 1113 aa8.57□□□□□ -1.04
LIP1YMR298W HLR1Q04429 423 aa8.57□□□□□ -1.04
LIP1YMR298W YMR252CQ04814 134 aa8.57□□□□□ -1.04
LIP1YMR298W RRP9Q06506 573 aaKnown RBP8.57□□□□□ -1.04
LIP1YMR298W MRPL35Q06678 367 aa8.57□□□□□ -1.04
LIP1YMR298W YOR378WQ08902 515 aa8.57□□□□□ -1.04
LIP1YMR298W BAG7Q12128 409 aa8.57□□□□□ -1.04
LIP1YMR298W YIL046W-AQ3E7Z4 54 aa8.57□□□□□ -1.04
LIP1YMR298W GCN4P03069 281 aa8.56□□□□□ -1.04
LIP1YMR298W PEP4P07267 405 aaKnown RBP8.56□□□□□ -1.04
LIP1YMR298W RPB8P20436 146 aa8.56□□□□□ -1.04
LIP1YMR298W DBF2P22204 572 aa8.56□□□□□ -1.04
LIP1YMR298W PAM16P42949 149 aa8.56□□□□□ -1.04
LIP1YMR298W SAY1P53324 424 aa8.56□□□□□ -1.04
LIP1YMR298W TPO3Q06451 622 aa8.56□□□□□ -1.04
LIP1YMR298W LUC7Q07508 261 aaPredicted RBP8.56□□□□□ -1.04
LIP1YMR298W IRC19Q07843 230 aa8.56□□□□□ -1.04
LIP1YMR298W YOR283WQ12040 230 aaKnown RBP8.56□□□□□ -1.04
LIP1YMR298W TIR4Q12218 487 aaPredicted RBP8.56□□□□□ -1.04
LIP1YMR298W HIS3P06633 220 aa8.55□□□□□ -1.04
LIP1YMR298W RPS18AP0CX55 146 aaKnown RBP8.55□□□□□ -1.04
LIP1YMR298W RPS18BP0CX56 146 aaPredicted RBP8.55□□□□□ -1.04
LIP1YMR298W STE50P25344 346 aa8.55□□□□□ -1.04
LIP1YMR298W EHD3P28817 500 aa8.55□□□□□ -1.04
LIP1YMR298W SEF1P34228 1148 aa8.55□□□□□ -1.04
LIP1YMR298W YKR073CP36153 106 aa8.55□□□□□ -1.04
LIP1YMR298W CCC1P47818 322 aa8.55□□□□□ -1.04
LIP1YMR298W PLB2Q03674 706 aa8.55□□□□□ -1.04
LIP1YMR298W TRS23Q03784 219 aa8.55□□□□□ -1.04
LIP1YMR298W YDR249CQ03787 373 aa8.55□□□□□ -1.04
LIP1YMR298W SNX41Q04053 625 aa8.55□□□□□ -1.04
LIP1YMR298W RBS1Q05672 457 aaKnown RBP8.55□□□□□ -1.04
LIP1YMR298W TSR2Q06672 205 aaKnown RBP8.55□□□□□ -1.04
LIP1YMR298W YOR343CQ12484 108 aa8.55□□□□□ -1.04
LIP1YMR298W CYC1P00044 109 aaPredicted RBP8.54□□□□□ -1.04
LIP1YMR298W CDC9P04819 755 aa8.54□□□□□ -1.04
LIP1YMR298W ITR1P30605 584 aa8.54□□□□□ -1.04
LIP1YMR298W SFK1P35735 353 aa8.54□□□□□ -1.04
LIP1YMR298W PEX32P38292 413 aa8.54□□□□□ -1.04
LIP1YMR298W PTH1P38876 190 aaKnown RBP8.54□□□□□ -1.04
LIP1YMR298W YKE4P40544 346 aa8.54□□□□□ -1.04
LIP1YMR298W NAS2P40555 220 aa8.54□□□□□ -1.04
LIP1YMR298W BNA6P43619 295 aa8.54□□□□□ -1.04
LIP1YMR298W DOC1P53068 250 aa8.54□□□□□ -1.04
LIP1YMR298W LSM7P53905 115 aaKnown RBP8.54□□□□□ -1.04
LIP1YMR298W APM1Q00776 475 aaPredicted RBP8.54□□□□□ -1.04
LIP1YMR298W SSY1Q03770 852 aa8.54□□□□□ -1.04
LIP1YMR298W PHO92Q06390 306 aa8.54□□□□□ -1.04
LIP1YMR298W AKR2Q12013 749 aa8.54□□□□□ -1.04
LIP1YMR298W ATG41Q12048 136 aa8.54□□□□□ -1.04
LIP1YMR298W YLR125WQ12138 136 aa8.54□□□□□ -1.04
LIP1YMR298W SCM3Q12334 223 aa8.54□□□□□ -1.04
LIP1YMR298W BRR2P32639 2163 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms