RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C MCH2P36032 473 aa1.69□□□□□ -2.14
AFB1YLR040C YKR032WP36127 104 aa1.69□□□□□ -2.14
AFB1YLR040C AIM29P36154 155 aa1.69□□□□□ -2.14
AFB1YLR040C YHR035WP38769 630 aa1.69□□□□□ -2.14
AFB1YLR040C UTP25P40498 721 aaKnown RBP1.69□□□□□ -2.14
AFB1YLR040C INA22P40576 216 aa1.69□□□□□ -2.14
AFB1YLR040C OKP1P53298 406 aa1.69□□□□□ -2.14
AFB1YLR040C OSH6Q02201 448 aa1.69□□□□□ -2.14
AFB1YLR040C UTP23Q12339 254 aaKnown RBP1.69□□□□□ -2.14
AFB1YLR040C MRX4Q12467 430 aa1.69□□□□□ -2.14
AFB1YLR040C DCP1Q12517 231 aaPredicted RBP1.69□□□□□ -2.14
AFB1YLR040C LAG2Q92325 660 aa1.69□□□□□ -2.14
AFB1YLR040C YAK1P14680 807 aa1.68□□□□□ -2.14
AFB1YLR040C RSA4P25382 515 aaKnown RBP1.68□□□□□ -2.14
AFB1YLR040C VPH2P32341 215 aa1.68□□□□□ -2.14
AFB1YLR040C MED6P38782 295 aa1.68□□□□□ -2.14
AFB1YLR040C FET3P38993 636 aa1.68□□□□□ -2.14
AFB1YLR040C SYS1P41544 203 aa1.68□□□□□ -2.14
AFB1YLR040C YMR111CQ04461 462 aaPredicted RBP1.68□□□□□ -2.14
AFB1YLR040C YDR114CQ04597 100 aa1.68□□□□□ -2.14
AFB1YLR040C PBP4Q07362 185 aaKnown RBP1.68□□□□□ -2.14
AFB1YLR040C PGC1Q08959 321 aa1.68□□□□□ -2.14
AFB1YLR040C SAM4Q08985 325 aaKnown RBP1.68□□□□□ -2.14
AFB1YLR040C YOL163WP0CF20 169 aa1.67□□□□□ -2.14
AFB1YLR040C CDC13P32797 924 aaKnown RBP1.67□□□□□ -2.14
AFB1YLR040C IMP3P32899 183 aaPredicted RBP1.67□□□□□ -2.14
AFB1YLR040C MRPL6P32904 214 aa1.67□□□□□ -2.14
AFB1YLR040C YBL081WP38180 368 aaKnown RBP1.67□□□□□ -2.14
AFB1YLR040C VAB2P40003 282 aa1.67□□□□□ -2.14
AFB1YLR040C YER188WP40103 239 aa1.67□□□□□ -2.14
AFB1YLR040C YIL012WP40551 113 aa1.67□□□□□ -2.14
AFB1YLR040C YFL064CP43540 174 aa1.67□□□□□ -2.14
AFB1YLR040C CAB5Q03941 241 aa1.67□□□□□ -2.14
AFB1YLR040C ARC18Q05933 178 aaKnown RBP1.67□□□□□ -2.14
AFB1YLR040C FEX1Q08913 375 aa1.67□□□□□ -2.14
AFB1YLR040C FEX2Q08991 375 aa1.67□□□□□ -2.14
AFB1YLR040C SPT7P35177 1332 aa1.66□□□□□ -2.14
AFB1YLR040C CDC37P06101 506 aaKnown RBP1.66□□□□□ -2.14
AFB1YLR040C TPO5P36029 618 aa1.66□□□□□ -2.14
AFB1YLR040C SWC5P38326 303 aa1.66□□□□□ -2.14
AFB1YLR040C YHL044WP38727 235 aa1.66□□□□□ -2.14
AFB1YLR040C CAJ1P39101 391 aa1.66□□□□□ -2.14
AFB1YLR040C PCL7P40186 285 aa1.66□□□□□ -2.14
AFB1YLR040C UBC13P52490 153 aa1.66□□□□□ -2.14
AFB1YLR040C ABZ2Q03266 374 aa1.66□□□□□ -2.14
AFB1YLR040C VPS20Q04272 221 aa1.66□□□□□ -2.14
AFB1YLR040C PFK27Q12471 397 aaPredicted RBP1.66□□□□□ -2.14
AFB1YLR040C LIF1P53150 421 aa1.65□□□□□ -2.15
AFB1YLR040C PRO2P54885 456 aaKnown RBP1.65□□□□□ -2.15
AFB1YLR040C RGM1Q00453 211 aa1.65□□□□□ -2.15
AFB1YLR040C TAZ1Q06510 381 aa1.65□□□□□ -2.15
AFB1YLR040C PRR2Q12310 699 aa1.65□□□□□ -2.15
AFB1YLR040C TIM22Q12328 207 aa1.65□□□□□ -2.15
AFB1YLR040C RPL31AP0C2H8 113 aaKnown RBP1.64□□□□□ -2.15
AFB1YLR040C MSS116P15424 664 aaKnown RBP1.64□□□□□ -2.15
AFB1YLR040C SNF6P18888 332 aa1.64□□□□□ -2.15
AFB1YLR040C IMP1P28627 190 aa1.64□□□□□ -2.15
AFB1YLR040C MRPL3P36516 390 aa1.64□□□□□ -2.15
AFB1YLR040C MBA1P38300 278 aa1.64□□□□□ -2.15
AFB1YLR040C END3P39013 349 aa1.64□□□□□ -2.15
AFB1YLR040C GDS1P41913 522 aa1.64□□□□□ -2.15
AFB1YLR040C PIR5P46999 287 aa1.64□□□□□ -2.15
AFB1YLR040C PRP24P49960 444 aaKnown RBP1.64□□□□□ -2.15
AFB1YLR040C MIG2P53035 382 aa1.64□□□□□ -2.15
AFB1YLR040C TPN1P53099 579 aa1.64□□□□□ -2.15
AFB1YLR040C YGR266WP53326 701 aa1.64□□□□□ -2.15
AFB1YLR040C PEX30Q06169 523 aa1.64□□□□□ -2.15
AFB1YLR040C YPR1Q12458 312 aa1.64□□□□□ -2.15
AFB1YLR040C PHO80P20052 293 aa1.63□□□□□ -2.15
AFB1YLR040C VPS1P21576 704 aaKnown RBP1.63□□□□□ -2.15
AFB1YLR040C IFM1P25038 676 aa1.63□□□□□ -2.15
AFB1YLR040C RPL16BP26785 198 aaKnown RBP1.63□□□□□ -2.15
AFB1YLR040C GCG1P32656 232 aaKnown RBP1.63□□□□□ -2.15
AFB1YLR040C PES4P39684 611 aa1.63□□□□□ -2.15
AFB1YLR040C AVT7P40501 490 aa1.63□□□□□ -2.15
AFB1YLR040C RIB4P50861 169 aaPredicted RBP1.63□□□□□ -2.15
AFB1YLR040C DBP6P53734 629 aaKnown RBP1.63□□□□□ -2.15
AFB1YLR040C YNL095CP53932 642 aa1.63□□□□□ -2.15
AFB1YLR040C ATG5Q12380 294 aa1.63□□□□□ -2.15
AFB1YLR040C HIS3P06633 220 aa1.62□□□□□ -2.15
AFB1YLR040C RAD7P06779 565 aa1.62□□□□□ -2.15
AFB1YLR040C CAR2P07991 424 aaKnown RBP1.62□□□□□ -2.15
AFB1YLR040C TPM1P17536 199 aaKnown RBP1.62□□□□□ -2.15
AFB1YLR040C TRX1P22217 103 aaKnown RBP1.62□□□□□ -2.15
AFB1YLR040C TRM7P38238 310 aaKnown RBP1.62□□□□□ -2.15
AFB1YLR040C SSO2P39926 295 aa1.62□□□□□ -2.15
AFB1YLR040C KRE29P40026 464 aa1.62□□□□□ -2.15
AFB1YLR040C SWC4P53201 476 aa1.62□□□□□ -2.15
AFB1YLR040C BIO4P53630 237 aa1.62□□□□□ -2.15
AFB1YLR040C ALG9P53868 555 aaKnown RBP1.62□□□□□ -2.15
AFB1YLR040C MRS2Q01926 470 aa1.62□□□□□ -2.15
AFB1YLR040C NNT1Q05874 261 aa1.62□□□□□ -2.15
AFB1YLR040C CDD1Q06549 142 aa1.62□□□□□ -2.15
AFB1YLR040C APC9Q12107 265 aa1.62□□□□□ -2.15
AFB1YLR040C IZH4Q99393 312 aa1.62□□□□□ -2.15
AFB1YLR040C GAL7P08431 366 aa1.61□□□□□ -2.15
AFB1YLR040C PET18P25362 215 aa1.61□□□□□ -2.15
AFB1YLR040C CAB3P36076 571 aa1.61□□□□□ -2.15
AFB1YLR040C AVT6P40074 448 aa1.61□□□□□ -2.15
AFB1YLR040C CDC40P40968 455 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms